Experiment: NL-CCM, start OD=0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00694 and MPMX19_00695 are separated by 172 nucleotides MPMX19_00695 and MPMX19_00696 are separated by 36 nucleotides MPMX19_00696 and MPMX19_00697 are separated by 3 nucleotides MPMX19_00697 and MPMX19_00698 overlap by 4 nucleotides
MPMX19_00694: MPMX19_00694 - 2',3'-cyclic-nucleotide 2'-phosphodiesterase, at 716,066 to 716,890
_00694
MPMX19_00695: MPMX19_00695 - putative transcriptional regulatory protein, at 717,063 to 717,815
_00695
MPMX19_00696: MPMX19_00696 - Crossover junction endodeoxyribonuclease RuvC, at 717,852 to 718,940
_00696
MPMX19_00697: MPMX19_00697 - Holliday junction ATP-dependent DNA helicase RuvA, at 718,944 to 719,570
_00697
MPMX19_00698: MPMX19_00698 - Holliday junction ATP-dependent DNA helicase RuvB, at 719,567 to 720,640
_00698
Position (kb) 717
718
719 Strain fitness (log2 ratio) -2
-1
0
1 at 716.888 kb on + strand at 716.888 kb on + strand at 716.888 kb on + strand at 716.888 kb on + strand at 716.888 kb on + strand at 716.889 kb on - strand at 716.889 kb on - strand at 716.889 kb on - strand at 716.889 kb on - strand at 716.889 kb on - strand at 716.932 kb on + strand at 716.933 kb on - strand at 716.933 kb on - strand at 716.933 kb on - strand at 716.943 kb on + strand at 716.943 kb on + strand at 716.943 kb on + strand at 716.943 kb on + strand at 716.943 kb on + strand at 716.944 kb on - strand at 716.944 kb on - strand at 716.944 kb on - strand at 716.944 kb on - strand at 716.944 kb on - strand at 716.944 kb on - strand at 716.944 kb on - strand at 717.000 kb on + strand at 717.000 kb on + strand at 717.000 kb on + strand at 717.000 kb on + strand at 717.000 kb on + strand at 717.000 kb on + strand at 717.000 kb on + strand at 717.000 kb on + strand at 717.000 kb on + strand at 717.000 kb on + strand at 717.000 kb on + strand at 717.000 kb on + strand at 717.000 kb on + strand at 717.000 kb on + strand at 717.000 kb on + strand at 717.000 kb on + strand at 717.000 kb on + strand at 717.000 kb on + strand at 717.000 kb on + strand at 717.000 kb on + strand at 717.000 kb on + strand at 717.000 kb on + strand at 717.000 kb on + strand at 717.000 kb on + strand at 717.000 kb on + strand at 717.000 kb on + strand at 717.000 kb on + strand at 717.000 kb on + strand at 717.000 kb on + strand at 717.000 kb on + strand at 717.309 kb on + strand, within MPMX19_00695 at 717.309 kb on + strand, within MPMX19_00695 at 717.309 kb on + strand, within MPMX19_00695 at 717.309 kb on + strand, within MPMX19_00695 at 717.324 kb on + strand, within MPMX19_00695 at 717.333 kb on + strand, within MPMX19_00695 at 717.423 kb on + strand, within MPMX19_00695 at 717.423 kb on + strand, within MPMX19_00695 at 717.423 kb on + strand, within MPMX19_00695 at 717.423 kb on + strand, within MPMX19_00695 at 718.388 kb on + strand, within MPMX19_00696 at 718.388 kb on + strand, within MPMX19_00696 at 718.388 kb on + strand, within MPMX19_00696 at 718.388 kb on + strand, within MPMX19_00696 at 718.388 kb on + strand, within MPMX19_00696 at 718.388 kb on + strand, within MPMX19_00696 at 718.388 kb on + strand, within MPMX19_00696 at 718.388 kb on + strand, within MPMX19_00696 at 718.388 kb on + strand, within MPMX19_00696 at 718.388 kb on + strand, within MPMX19_00696 at 718.388 kb on + strand, within MPMX19_00696 at 718.389 kb on - strand, within MPMX19_00696 at 718.389 kb on - strand, within MPMX19_00696 at 718.389 kb on - strand, within MPMX19_00696 at 718.389 kb on - strand, within MPMX19_00696 at 718.389 kb on - strand, within MPMX19_00696 at 718.389 kb on - strand, within MPMX19_00696 at 718.389 kb on - strand, within MPMX19_00696 at 718.631 kb on + strand, within MPMX19_00696 at 718.631 kb on + strand, within MPMX19_00696 at 718.631 kb on + strand, within MPMX19_00696 at 718.631 kb on + strand, within MPMX19_00696 at 718.631 kb on + strand, within MPMX19_00696 at 718.631 kb on + strand, within MPMX19_00696 at 718.631 kb on + strand, within MPMX19_00696 at 718.631 kb on + strand, within MPMX19_00696 at 718.631 kb on + strand, within MPMX19_00696 at 718.633 kb on + strand, within MPMX19_00696 at 718.633 kb on + strand, within MPMX19_00696 at 718.633 kb on + strand, within MPMX19_00696 at 719.019 kb on + strand, within MPMX19_00697 at 719.460 kb on + strand, within MPMX19_00697 at 719.923 kb on + strand, within MPMX19_00698
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.1 remove 716,888 + +0.2 716,888 + +0.6 716,888 + -0.2 716,888 + -1.2 716,888 + -2.2 716,889 - +0.0 716,889 - -0.6 716,889 - +0.0 716,889 - -1.2 716,889 - -1.0 716,932 + -0.7 716,933 - -0.6 716,933 - +1.0 716,933 - -2.2 716,943 + +0.7 716,943 + -1.4 716,943 + +0.2 716,943 + -0.5 716,943 + +0.4 716,944 - -0.8 716,944 - -0.4 716,944 - +0.6 716,944 - -0.7 716,944 - +0.9 716,944 - -0.2 716,944 - -1.1 717,000 + -2.6 717,000 + -1.6 717,000 + -0.4 717,000 + -1.1 717,000 + -0.8 717,000 + -0.4 717,000 + -1.6 717,000 + -1.4 717,000 + +1.0 717,000 + -0.1 717,000 + -1.8 717,000 + -0.6 717,000 + -0.6 717,000 + -0.2 717,000 + -0.9 717,000 + +0.2 717,000 + +0.3 717,000 + +0.8 717,000 + -0.1 717,000 + -1.4 717,000 + -0.2 717,000 + -0.5 717,000 + +0.0 717,000 + -0.6 717,000 + +0.0 717,000 + -2.5 717,000 + -0.7 717,000 + -0.9 717,000 + -1.6 717,000 + -0.4 717,309 + MPMX19_00695 0.33 +0.8 717,309 + MPMX19_00695 0.33 -0.6 717,309 + MPMX19_00695 0.33 -1.6 717,309 + MPMX19_00695 0.33 +0.7 717,324 + MPMX19_00695 0.35 -1.5 717,333 + MPMX19_00695 0.36 -0.7 717,423 + MPMX19_00695 0.48 -0.6 717,423 + MPMX19_00695 0.48 -0.2 717,423 + MPMX19_00695 0.48 -0.7 717,423 + MPMX19_00695 0.48 +1.1 718,388 + MPMX19_00696 0.49 -0.7 718,388 + MPMX19_00696 0.49 +0.6 718,388 + MPMX19_00696 0.49 -0.6 718,388 + MPMX19_00696 0.49 -2.3 718,388 + MPMX19_00696 0.49 -0.6 718,388 + MPMX19_00696 0.49 -0.6 718,388 + MPMX19_00696 0.49 -0.7 718,388 + MPMX19_00696 0.49 -1.3 718,388 + MPMX19_00696 0.49 -0.7 718,388 + MPMX19_00696 0.49 -1.6 718,388 + MPMX19_00696 0.49 -0.9 718,389 - MPMX19_00696 0.49 -0.4 718,389 - MPMX19_00696 0.49 -1.0 718,389 - MPMX19_00696 0.49 +1.3 718,389 - MPMX19_00696 0.49 +0.6 718,389 - MPMX19_00696 0.49 -1.4 718,389 - MPMX19_00696 0.49 +0.8 718,389 - MPMX19_00696 0.49 +0.0 718,631 + MPMX19_00696 0.72 -1.0 718,631 + MPMX19_00696 0.72 +0.0 718,631 + MPMX19_00696 0.72 -1.6 718,631 + MPMX19_00696 0.72 -0.7 718,631 + MPMX19_00696 0.72 +1.0 718,631 + MPMX19_00696 0.72 +0.0 718,631 + MPMX19_00696 0.72 -1.0 718,631 + MPMX19_00696 0.72 -1.0 718,631 + MPMX19_00696 0.72 -1.0 718,633 + MPMX19_00696 0.72 -1.0 718,633 + MPMX19_00696 0.72 -0.5 718,633 + MPMX19_00696 0.72 +0.2 719,019 + MPMX19_00697 0.12 -1.0 719,460 + MPMX19_00697 0.82 +0.0 719,923 + MPMX19_00698 0.33 -0.7
Or see this region's nucleotide sequence