Experiment: NL-CCM, start OD=0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00689 and MPMX19_00690 are separated by 73 nucleotides MPMX19_00690 and MPMX19_00691 are separated by 399 nucleotides MPMX19_00691 and MPMX19_00692 are separated by 4 nucleotides
MPMX19_00689: MPMX19_00689 - Glyceraldehyde-3-phosphate dehydrogenase 1, at 711,081 to 712,103
_00689
MPMX19_00690: MPMX19_00690 - Transketolase 1, at 712,177 to 714,171
_00690
MPMX19_00691: MPMX19_00691 - hypothetical protein, at 714,571 to 714,795
_00691
MPMX19_00692: MPMX19_00692 - hypothetical protein, at 714,800 to 715,108
_00692
Position (kb) 712
713
714
715 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 711.259 kb on + strand, within MPMX19_00689 at 711.259 kb on + strand, within MPMX19_00689 at 711.259 kb on + strand, within MPMX19_00689 at 711.259 kb on + strand, within MPMX19_00689 at 711.260 kb on - strand, within MPMX19_00689 at 711.260 kb on - strand, within MPMX19_00689 at 711.260 kb on - strand, within MPMX19_00689 at 711.260 kb on - strand, within MPMX19_00689 at 712.039 kb on + strand at 712.039 kb on + strand at 712.096 kb on - strand at 712.179 kb on - strand at 714.404 kb on - strand at 714.410 kb on + strand at 714.411 kb on - strand at 714.411 kb on - strand at 714.473 kb on + strand at 714.473 kb on + strand at 714.473 kb on + strand at 714.473 kb on + strand at 714.473 kb on + strand at 714.473 kb on + strand at 714.473 kb on + strand at 714.474 kb on - strand at 714.474 kb on - strand at 714.474 kb on - strand at 714.474 kb on - strand at 714.474 kb on - strand at 714.474 kb on - strand at 714.485 kb on + strand at 714.836 kb on + strand, within MPMX19_00692 at 714.836 kb on + strand, within MPMX19_00692 at 714.836 kb on + strand, within MPMX19_00692 at 714.836 kb on + strand, within MPMX19_00692 at 714.836 kb on + strand, within MPMX19_00692 at 714.836 kb on + strand, within MPMX19_00692 at 714.836 kb on + strand, within MPMX19_00692 at 714.836 kb on + strand, within MPMX19_00692 at 714.836 kb on + strand, within MPMX19_00692 at 714.837 kb on - strand, within MPMX19_00692 at 714.837 kb on - strand, within MPMX19_00692 at 714.837 kb on - strand, within MPMX19_00692 at 714.837 kb on - strand, within MPMX19_00692 at 714.837 kb on - strand, within MPMX19_00692 at 714.837 kb on - strand, within MPMX19_00692 at 714.890 kb on + strand, within MPMX19_00692 at 714.890 kb on + strand, within MPMX19_00692 at 714.890 kb on + strand, within MPMX19_00692 at 714.890 kb on + strand, within MPMX19_00692 at 714.890 kb on + strand, within MPMX19_00692 at 714.890 kb on + strand, within MPMX19_00692 at 714.890 kb on + strand, within MPMX19_00692 at 714.890 kb on + strand, within MPMX19_00692 at 714.890 kb on + strand, within MPMX19_00692 at 714.890 kb on + strand, within MPMX19_00692 at 714.890 kb on + strand, within MPMX19_00692 at 714.890 kb on + strand, within MPMX19_00692 at 714.890 kb on + strand, within MPMX19_00692 at 714.890 kb on + strand, within MPMX19_00692 at 714.890 kb on + strand, within MPMX19_00692 at 714.890 kb on + strand, within MPMX19_00692 at 714.890 kb on + strand, within MPMX19_00692 at 714.890 kb on + strand, within MPMX19_00692 at 714.891 kb on - strand, within MPMX19_00692 at 714.891 kb on - strand, within MPMX19_00692 at 714.891 kb on - strand, within MPMX19_00692 at 714.891 kb on - strand, within MPMX19_00692 at 714.891 kb on - strand, within MPMX19_00692 at 714.891 kb on - strand, within MPMX19_00692 at 714.891 kb on - strand, within MPMX19_00692 at 714.891 kb on - strand, within MPMX19_00692 at 714.891 kb on - strand, within MPMX19_00692 at 714.891 kb on - strand, within MPMX19_00692 at 714.891 kb on - strand, within MPMX19_00692 at 714.891 kb on - strand, within MPMX19_00692 at 714.891 kb on - strand, within MPMX19_00692 at 715.106 kb on + strand at 715.106 kb on + strand at 715.106 kb on + strand at 715.106 kb on + strand at 715.106 kb on + strand at 715.106 kb on + strand at 715.107 kb on - strand at 715.107 kb on - strand at 715.107 kb on - strand at 715.107 kb on - strand at 715.107 kb on - strand at 715.107 kb on - strand at 715.107 kb on - strand at 715.107 kb on - strand at 715.107 kb on - strand at 715.114 kb on + strand at 715.114 kb on + strand at 715.114 kb on + strand at 715.114 kb on + strand at 715.114 kb on + strand at 715.114 kb on + strand at 715.114 kb on + strand at 715.115 kb on - strand at 715.115 kb on - strand at 715.115 kb on - strand at 715.152 kb on + strand at 715.152 kb on + strand at 715.152 kb on + strand at 715.153 kb on - strand at 715.153 kb on - strand at 715.153 kb on - strand at 715.153 kb on - strand at 715.153 kb on - strand at 715.153 kb on - strand at 715.153 kb on - strand at 715.153 kb on - strand at 715.153 kb on - strand at 715.153 kb on - strand at 715.153 kb on - strand at 715.153 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.1 remove 711,259 + MPMX19_00689 0.17 +0.9 711,259 + MPMX19_00689 0.17 +0.3 711,259 + MPMX19_00689 0.17 +0.8 711,259 + MPMX19_00689 0.17 -0.4 711,260 - MPMX19_00689 0.17 -0.9 711,260 - MPMX19_00689 0.17 -1.1 711,260 - MPMX19_00689 0.17 +1.6 711,260 - MPMX19_00689 0.17 +0.3 712,039 + -0.2 712,039 + +1.3 712,096 - +1.0 712,179 - -0.1 714,404 - +0.0 714,410 + -0.5 714,411 - +0.1 714,411 - +2.0 714,473 + -0.2 714,473 + -0.8 714,473 + +0.3 714,473 + -0.4 714,473 + +1.6 714,473 + -1.3 714,473 + -0.9 714,474 - -1.6 714,474 - -0.2 714,474 - -1.1 714,474 - -0.1 714,474 - -0.6 714,474 - +0.3 714,485 + -0.2 714,836 + MPMX19_00692 0.12 -1.0 714,836 + MPMX19_00692 0.12 -0.4 714,836 + MPMX19_00692 0.12 +0.3 714,836 + MPMX19_00692 0.12 -1.3 714,836 + MPMX19_00692 0.12 +0.1 714,836 + MPMX19_00692 0.12 +0.0 714,836 + MPMX19_00692 0.12 -0.2 714,836 + MPMX19_00692 0.12 +0.9 714,836 + MPMX19_00692 0.12 -0.3 714,837 - MPMX19_00692 0.12 -0.4 714,837 - MPMX19_00692 0.12 -0.8 714,837 - MPMX19_00692 0.12 -0.9 714,837 - MPMX19_00692 0.12 +1.4 714,837 - MPMX19_00692 0.12 -0.5 714,837 - MPMX19_00692 0.12 -0.4 714,890 + MPMX19_00692 0.29 -0.1 714,890 + MPMX19_00692 0.29 -1.0 714,890 + MPMX19_00692 0.29 -1.3 714,890 + MPMX19_00692 0.29 -1.1 714,890 + MPMX19_00692 0.29 -0.6 714,890 + MPMX19_00692 0.29 -1.1 714,890 + MPMX19_00692 0.29 -0.9 714,890 + MPMX19_00692 0.29 -0.7 714,890 + MPMX19_00692 0.29 -0.1 714,890 + MPMX19_00692 0.29 -1.6 714,890 + MPMX19_00692 0.29 -0.7 714,890 + MPMX19_00692 0.29 -2.0 714,890 + MPMX19_00692 0.29 -1.1 714,890 + MPMX19_00692 0.29 -0.3 714,890 + MPMX19_00692 0.29 -2.5 714,890 + MPMX19_00692 0.29 -1.0 714,890 + MPMX19_00692 0.29 -0.4 714,890 + MPMX19_00692 0.29 -0.6 714,891 - MPMX19_00692 0.29 -1.2 714,891 - MPMX19_00692 0.29 -1.3 714,891 - MPMX19_00692 0.29 -0.9 714,891 - MPMX19_00692 0.29 -0.3 714,891 - MPMX19_00692 0.29 -1.9 714,891 - MPMX19_00692 0.29 -0.9 714,891 - MPMX19_00692 0.29 -1.1 714,891 - MPMX19_00692 0.29 +1.3 714,891 - MPMX19_00692 0.29 -0.6 714,891 - MPMX19_00692 0.29 +0.2 714,891 - MPMX19_00692 0.29 +0.2 714,891 - MPMX19_00692 0.29 -1.6 714,891 - MPMX19_00692 0.29 +0.9 715,106 + +0.3 715,106 + -1.2 715,106 + +0.1 715,106 + -2.9 715,106 + +0.7 715,106 + +0.6 715,107 - +0.0 715,107 - -1.5 715,107 - +1.1 715,107 - +0.6 715,107 - +0.0 715,107 - +0.6 715,107 - -0.4 715,107 - -0.9 715,107 - -1.4 715,114 + +0.2 715,114 + -0.2 715,114 + -0.5 715,114 + +1.0 715,114 + +1.2 715,114 + +0.2 715,114 + +1.2 715,115 - +1.6 715,115 - +0.6 715,115 - +0.1 715,152 + -0.5 715,152 + -0.4 715,152 + -0.9 715,153 - -0.8 715,153 - -0.7 715,153 - -1.4 715,153 - -0.4 715,153 - +0.1 715,153 - -2.5 715,153 - -0.4 715,153 - +0.0 715,153 - -1.9 715,153 - -0.7 715,153 - +0.0 715,153 - +0.6
Or see this region's nucleotide sequence