Experiment: NL-CCM, start OD=0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00688 and MPMX19_00689 are separated by 69 nucleotides MPMX19_00689 and MPMX19_00690 are separated by 73 nucleotides
MPMX19_00688: MPMX19_00688 - Methyl-accepting chemotaxis protein, at 709,323 to 711,011
_00688
MPMX19_00689: MPMX19_00689 - Glyceraldehyde-3-phosphate dehydrogenase 1, at 711,081 to 712,103
_00689
MPMX19_00690: MPMX19_00690 - Transketolase 1, at 712,177 to 714,171
_00690
Position (kb)
711
712
713 Strain fitness (log2 ratio)
-2
-1
0
1 at 711.082 kb on + strand at 711.082 kb on + strand at 711.082 kb on + strand at 711.082 kb on + strand at 711.082 kb on + strand at 711.082 kb on + strand at 711.082 kb on + strand at 711.082 kb on + strand at 711.082 kb on + strand at 711.082 kb on + strand at 711.082 kb on + strand at 711.082 kb on + strand at 711.082 kb on + strand at 711.082 kb on + strand at 711.083 kb on - strand at 711.083 kb on - strand at 711.083 kb on - strand at 711.083 kb on - strand at 711.083 kb on - strand at 711.083 kb on - strand at 711.083 kb on - strand at 711.083 kb on - strand at 711.083 kb on - strand at 711.148 kb on + strand at 711.148 kb on + strand at 711.149 kb on - strand at 711.149 kb on - strand at 711.259 kb on + strand, within MPMX19_00689 at 711.259 kb on + strand, within MPMX19_00689 at 711.259 kb on + strand, within MPMX19_00689 at 711.259 kb on + strand, within MPMX19_00689 at 711.260 kb on - strand, within MPMX19_00689 at 711.260 kb on - strand, within MPMX19_00689 at 711.260 kb on - strand, within MPMX19_00689 at 711.260 kb on - strand, within MPMX19_00689 at 712.039 kb on + strand at 712.039 kb on + strand at 712.096 kb on - strand at 712.179 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.1 remove 711,082 + -1.9 711,082 + +0.3 711,082 + -0.1 711,082 + +0.3 711,082 + +0.6 711,082 + -0.6 711,082 + +0.0 711,082 + +0.6 711,082 + -0.5 711,082 + -0.9 711,082 + +0.8 711,082 + +0.4 711,082 + +0.4 711,082 + -0.2 711,083 - -0.4 711,083 - +0.2 711,083 - -0.3 711,083 - -0.1 711,083 - -1.6 711,083 - +0.6 711,083 - -0.4 711,083 - -0.5 711,083 - +1.6 711,148 + +1.4 711,148 + -2.1 711,149 - +0.8 711,149 - +0.6 711,259 + MPMX19_00689 0.17 +0.9 711,259 + MPMX19_00689 0.17 +0.3 711,259 + MPMX19_00689 0.17 +0.8 711,259 + MPMX19_00689 0.17 -0.4 711,260 - MPMX19_00689 0.17 -0.9 711,260 - MPMX19_00689 0.17 -1.1 711,260 - MPMX19_00689 0.17 +1.6 711,260 - MPMX19_00689 0.17 +0.3 712,039 + -0.2 712,039 + +1.3 712,096 - +1.0 712,179 - -0.1
Or see this region's nucleotide sequence