Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_00194

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
199,560	+		MPMX19_00190	0.56	+2.1
199,561	-		MPMX19_00190	0.57	-0.6
199,561	-		MPMX19_00190	0.57	+0.1
199,561	-		MPMX19_00190	0.57	-1.4
199,587	+		MPMX19_00190	0.67	-0.3
199,587	+		MPMX19_00190	0.67	-0.9
199,587	+		MPMX19_00190	0.67	-0.3
199,587	+		MPMX19_00190	0.67	-0.9
199,587	+		MPMX19_00190	0.67	-1.3
199,587	+		MPMX19_00190	0.67	-1.9
199,587	+		MPMX19_00190	0.67	-0.5
199,588	-		MPMX19_00190	0.67	-0.6
199,588	-		MPMX19_00190	0.67	-0.8
199,588	-		MPMX19_00190	0.67	+1.0
199,588	-		MPMX19_00190	0.67	-0.1
199,588	-		MPMX19_00190	0.67	-0.3
199,679	+				+0.7
199,679	+				-0.3
199,679	+				-0.4
199,679	+				-1.1
199,680	-				-0.7
199,680	-				+0.1
199,680	-				-0.6
199,680	-				+0.1
199,680	-				-0.6
199,742	+		MPMX19_00191	0.16	-0.3
199,742	+		MPMX19_00191	0.16	-0.1
199,742	+		MPMX19_00191	0.16	+1.1
199,742	+		MPMX19_00191	0.16	-0.1
199,742	+		MPMX19_00191	0.16	-1.3
199,742	+		MPMX19_00191	0.16	+0.7
199,742	+		MPMX19_00191	0.16	+0.4
199,743	-		MPMX19_00191	0.17	+1.3
199,743	-		MPMX19_00191	0.17	+0.6
199,843	+		MPMX19_00191	0.74	-0.1
199,843	+		MPMX19_00191	0.74	+0.7
199,843	+		MPMX19_00191	0.74	+0.9
199,844	-		MPMX19_00191	0.75	+0.2
199,844	-		MPMX19_00191	0.75	+0.1
200,002	+				-1.2
200,002	+				-1.3
200,002	+				-0.3
200,002	+				+0.3
200,002	+				-0.9
200,032	+				-0.1
200,037	+				+0.1
200,040	+				-0.6
200,040	+				-0.4
200,040	+				+0.7
200,227	+				-2.0
200,227	+				-1.5
200,227	+				-1.2
200,228	-				-2.1
200,228	-				-1.4
200,399	+		MPMX19_00193	0.49	-1.9
200,400	-		MPMX19_00193	0.49	+0.9
200,400	-		MPMX19_00193	0.49	+0.1
200,479	+				-1.4
200,479	+				-0.3
200,479	+				+0.7
200,479	+				-1.9
200,479	+				-1.3
200,479	+				-0.1
200,479	+				-1.4
200,479	+				-2.1
200,479	+				-0.9
200,479	+				+1.1
200,479	+				-0.7
200,479	+				-1.6
200,479	+				+0.1
200,479	+				-0.5
200,479	+				+0.4
200,479	+				-0.5
200,479	+				-0.7
200,479	+				+0.3
200,479	+				-0.9
200,479	+				-0.8
200,479	+				-0.9
200,479	+				-3.6
200,480	-				-0.7
200,480	-				+1.7
200,480	-				-0.4
200,480	-				-1.3
200,480	-				-1.1
200,480	-				+0.1
200,480	-				+0.7
200,480	-				-1.3
200,480	-				-0.7
200,480	-				+0.7
200,480	-				-0.9
200,480	-				+0.4
200,480	-				-1.4
200,480	-				+0.3
200,480	-				+0.0
200,480	-				-0.5
200,480	-				+0.8
200,480	-				-0.1
200,480	-				+0.2
200,480	-				-0.5
200,480	-				+1.0
200,480	-				-1.2
200,480	-				-1.1
200,480	-				+0.4
200,480	-				-0.4
200,480	-				-0.6
200,480	-				-1.4
200,480	-				+2.4
200,593	+		MPMX19_00194	0.50	-0.1
200,593	+		MPMX19_00194	0.50	-0.8
200,593	+		MPMX19_00194	0.50	-1.0
200,593	+		MPMX19_00194	0.50	-0.4
200,593	+		MPMX19_00194	0.50	-0.8
200,593	+		MPMX19_00194	0.50	+0.1
200,593	+		MPMX19_00194	0.50	-1.4
200,593	+		MPMX19_00194	0.50	-0.2
200,593	+		MPMX19_00194	0.50	-0.4
200,593	+		MPMX19_00194	0.50	-1.2
200,594	-		MPMX19_00194	0.51	+0.1
200,594	-		MPMX19_00194	0.51	-1.3
200,594	-		MPMX19_00194	0.51	-0.9
200,594	-		MPMX19_00194	0.51	-2.4
200,594	-		MPMX19_00194	0.51	+0.9
200,594	-		MPMX19_00194	0.51	-0.4
200,594	-		MPMX19_00194	0.51	+0.1
200,594	-		MPMX19_00194	0.51	-0.9
200,709	+				-0.9
200,709	+				-1.0
200,709	+				-1.1
200,709	+				-0.9
200,709	+				-0.3
200,709	+				-0.3
200,709	+				-1.1
200,709	+				+0.1
200,709	+				-0.5
200,709	+				+0.1
200,709	+				-0.3
200,709	+				-0.6
200,709	+				+0.4
200,709	+				+0.6
200,709	+				-0.3
200,709	+				-0.9
200,709	+				-2.8
200,709	+				-1.3
200,709	+				+0.5
200,709	+				+0.0
200,709	+				-0.8
200,709	+				-0.8
200,710	-				+0.4
200,710	-				+0.1
200,710	-				-0.4
200,710	-				-0.9
200,710	-				-1.3
200,710	-				-0.2
200,710	-				-1.1
200,710	-				-1.5
200,710	-				-0.8
200,710	-				+1.5
200,710	-				-0.1
200,710	-				-0.7
200,710	-				-0.9
200,710	-				+0.7
200,710	-				-0.6
200,710	-				-0.3
200,710	-				+0.0
200,710	-				-0.1
200,710	-				-0.4
200,710	-				-0.1
200,710	-				-0.1
200,710	-				-0.6
200,710	-				-0.9
200,710	-				-0.9
200,735	+				-0.3
200,735	+				+0.3
200,735	+				-0.7
200,735	+				+0.7
200,735	+				-0.1
200,735	+				-0.8
200,735	+				-0.1
200,735	+				-0.7
200,735	+				+0.4
200,735	+				-0.4
200,735	+				-0.7
200,735	+				-0.9
200,735	+				-0.2
200,735	+				-0.6
200,735	+				+0.0
200,735	+				+0.6
200,735	+				+0.1
200,735	+				-1.9
200,735	+				+0.3
200,735	+				+1.2
200,735	+				-1.5
200,735	+				+0.1
200,735	+				+0.1
200,735	+				-1.1
200,735	+				-0.4
200,735	+				-2.2
200,735	+				-0.9
200,735	+				-0.1
200,735	+				-1.6
200,735	+				-0.6
200,735	+				-2.4
200,735	+				-0.6
200,735	+				-1.1
200,735	+				-1.0
200,735	+				-2.3
200,735	+				-0.1
200,735	+				+0.6
200,735	+				+2.2
200,735	+				-0.4
200,735	+				-0.5
200,735	+				-0.6
200,735	+				-1.8
200,735	+				+0.5
200,735	+				-0.3
200,735	+				-1.5
200,735	+				-1.3
200,735	+				-0.0
200,735	+				+1.1
200,735	+				+1.5
200,735	+				+0.0
200,735	+				-1.3
200,735	+				-0.1
200,735	+				-0.5
200,735	+				-0.4
200,735	+				-0.9
200,735	+				+1.1
200,735	+				-0.5
200,735	+				-0.4
200,735	+				+0.1
200,735	+				-1.4
200,735	+				-0.4
200,735	+				-0.4
200,735	+				-0.6
200,735	+				+1.5
200,735	+				-1.1
200,735	+				+1.3
200,735	+				-0.9
200,735	+				-0.4
200,735	+				-1.4
200,735	+				-0.9
200,735	+				-0.7
200,735	+				+0.3
200,735	+				-1.3
200,735	+				+0.0
200,735	+				+1.3
200,735	+				-0.2
200,735	+				-0.0
200,735	+				-0.1
200,735	+				+0.9
200,735	+				+0.3
200,735	+				+0.3
200,736	-				+0.1
200,736	-				-0.9
200,736	-				-0.6
200,736	-				+0.5
200,736	-				-0.2
200,736	-				+0.8
200,736	-				+0.9
200,736	-				-0.6
200,736	-				+0.7
200,736	-				-0.9
200,736	-				-0.6
200,736	-				-1.2
200,736	-				-0.3
200,736	-				-0.0
200,736	-				-0.3
200,736	-				-1.4
200,736	-				-2.6
200,736	-				-1.9
200,736	-				-0.7
200,736	-				+0.7
200,736	-				-0.4
200,736	-				+0.2
200,736	-				-0.4
200,736	-				-0.1
200,736	-				-0.8
200,736	-				+0.1
200,736	-				+0.1
200,736	-				+0.5
200,736	-				+0.8
200,736	-				+0.3
200,736	-				+0.6
200,736	-				-1.6
200,736	-				-0.6
200,736	-				-0.6
200,736	-				-0.3
200,736	-				+0.1
200,736	-				-0.5
200,736	-				+1.0
200,736	-				-0.7
200,736	-				-1.1
200,736	-				-0.6
200,736	-				-0.3
200,736	-				-0.7
200,736	-				+1.9
200,736	-				+0.3
200,736	-				+1.0
200,736	-				-2.5
200,736	-				-1.4
200,736	-				+0.1
200,736	-				+0.2
200,736	-				+0.5
200,736	-				-0.5
200,736	-				-1.4
200,736	-				-0.9
200,736	-				-1.3
200,736	-				-0.0
201,247	+				-0.3
201,340	+				-0.3
201,626	+		MPMX19_00196	0.76	+1.4
201,626	+		MPMX19_00196	0.76	-0.0
201,626	+		MPMX19_00196	0.76	-2.2
201,626	+		MPMX19_00196	0.76	-0.9
201,626	+		MPMX19_00196	0.76	+0.3
201,626	+		MPMX19_00196	0.76	-1.2
201,626	+		MPMX19_00196	0.76	+1.0
201,626	+		MPMX19_00196	0.76	+0.7
201,626	+		MPMX19_00196	0.76	-0.4
201,626	+		MPMX19_00196	0.76	-0.4
201,626	+		MPMX19_00196	0.76	-1.6
201,626	+		MPMX19_00196	0.76	-0.0
201,626	+		MPMX19_00196	0.76	-1.7
201,626	+		MPMX19_00196	0.76	-2.3
201,626	+		MPMX19_00196	0.76	+0.9
201,626	+		MPMX19_00196	0.76	+0.4
201,626	+		MPMX19_00196	0.76	-0.6
201,626	+		MPMX19_00196	0.76	+0.7
201,626	+		MPMX19_00196	0.76	-0.1
201,626	+		MPMX19_00196	0.76	-0.9
201,626	+		MPMX19_00196	0.76	-0.0
201,626	+		MPMX19_00196	0.76	+0.5
201,626	+		MPMX19_00196	0.76	-0.7
201,626	+		MPMX19_00196	0.76	-1.0
201,626	+		MPMX19_00196	0.76	-0.6
201,626	+		MPMX19_00196	0.76	-0.1
201,627	-		MPMX19_00196	0.77	-0.4
201,627	-		MPMX19_00196	0.77	-0.3
201,627	-		MPMX19_00196	0.77	+0.7
201,627	-		MPMX19_00196	0.77	+0.5
201,627	-		MPMX19_00196	0.77	+0.3
201,627	-		MPMX19_00196	0.77	+0.0
201,627	-		MPMX19_00196	0.77	-0.4
201,627	-		MPMX19_00196	0.77	-0.7
201,627	-		MPMX19_00196	0.77	-1.7
201,627	-		MPMX19_00196	0.77	-1.1
201,627	-		MPMX19_00196	0.77	+0.7
201,627	-		MPMX19_00196	0.77	+0.3
201,627	-		MPMX19_00196	0.77	-0.4
201,627	-		MPMX19_00196	0.77	-0.4
201,627	-		MPMX19_00196	0.77	+0.6
201,627	-		MPMX19_00196	0.77	-0.9
201,627	-		MPMX19_00196	0.77	+0.3
201,627	-		MPMX19_00196	0.77	-0.6
201,627	-		MPMX19_00196	0.77	+0.1
201,627	-		MPMX19_00196	0.77	+1.1
201,627	-		MPMX19_00196	0.77	+0.7
201,627	-		MPMX19_00196	0.77	-0.5
201,627	-		MPMX19_00196	0.77	-0.9
201,627	-		MPMX19_00196	0.77	+0.3
201,627	-		MPMX19_00196	0.77	-1.3
201,627	-		MPMX19_00196	0.77	-2.2
201,627	-		MPMX19_00196	0.77	-1.7
201,627	-		MPMX19_00196	0.77	-2.3
201,627	-		MPMX19_00196	0.77	-0.3
201,627	-		MPMX19_00196	0.77	-0.3
201,627	-		MPMX19_00196	0.77	-2.4
201,627	-		MPMX19_00196	0.77	-1.3
201,627	-		MPMX19_00196	0.77	-0.6
201,627	-		MPMX19_00196	0.77	+0.4
201,628	+		MPMX19_00196	0.77	+0.9
201,628	+		MPMX19_00196	0.77	+0.7
201,628	+		MPMX19_00196	0.77	-1.6
201,628	+		MPMX19_00196	0.77	+0.6
201,628	+		MPMX19_00196	0.77	-0.8
201,628	+		MPMX19_00196	0.77	-0.1
201,628	+		MPMX19_00196	0.77	+0.3
201,629	-		MPMX19_00196	0.77	-0.4
201,629	-		MPMX19_00196	0.77	-0.9
201,629	-		MPMX19_00196	0.77	-0.0
201,629	-		MPMX19_00196	0.77	+1.2
201,653	+		MPMX19_00196	0.84	-0.0
201,653	+		MPMX19_00196	0.84	+0.3
201,653	+		MPMX19_00196	0.84	+0.0
201,653	+		MPMX19_00196	0.84	+0.2
201,653	+		MPMX19_00196	0.84	+0.7
201,653	+		MPMX19_00196	0.84	-0.3
201,653	+		MPMX19_00196	0.84	+0.6
201,653	+		MPMX19_00196	0.84	-0.1
201,653	+		MPMX19_00196	0.84	-0.8
201,653	+		MPMX19_00196	0.84	-0.7
201,653	+		MPMX19_00196	0.84	+0.6
201,653	+		MPMX19_00196	0.84	+0.9
201,653	+		MPMX19_00196	0.84	-1.0
201,654	-		MPMX19_00196	0.84	-0.1
201,654	-		MPMX19_00196	0.84	-1.6
201,654	-		MPMX19_00196	0.84	-0.2
201,654	-		MPMX19_00196	0.84	-1.2
201,654	-		MPMX19_00196	0.84	-1.9
201,654	-		MPMX19_00196	0.84	+0.1
201,654	-		MPMX19_00196	0.84	-1.2
201,654	-		MPMX19_00196	0.84	-0.9
201,654	-		MPMX19_00196	0.84	-0.9
201,654	-		MPMX19_00196	0.84	+0.7
201,654	-		MPMX19_00196	0.84	+0.5
201,654	-		MPMX19_00196	0.84	+0.7
201,654	-		MPMX19_00196	0.84	-0.3
201,654	-		MPMX19_00196	0.84	-0.3
201,654	-		MPMX19_00196	0.84	+0.7
201,654	-		MPMX19_00196	0.84	-0.9
201,654	-		MPMX19_00196	0.84	+0.3
201,654	-		MPMX19_00196	0.84	+0.3
201,654	-		MPMX19_00196	0.84	+1.1
201,654	-		MPMX19_00196	0.84	+0.3
201,654	-		MPMX19_00196	0.84	-0.6
201,654	-		MPMX19_00196	0.84	-1.1
201,654	-		MPMX19_00196	0.84	+0.1
201,654	-		MPMX19_00196	0.84	-0.2