Experiment: NL-CCM, start OD=0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00078 and MPMX19_00079 are separated by 36 nucleotides MPMX19_00079 and MPMX19_00080 are separated by 6 nucleotides
MPMX19_00078: MPMX19_00078 - Glyoxylate/hydroxypyruvate reductase A, at 83,416 to 84,342
_00078
MPMX19_00079: MPMX19_00079 - putative protein kinase UbiB, at 84,379 to 85,917
_00079
MPMX19_00080: MPMX19_00080 - Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE, at 85,924 to 86,730
_00080
Position (kb)
84
85
86 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 83.396 kb on + strand at 83.396 kb on + strand at 83.396 kb on + strand at 83.396 kb on + strand at 83.396 kb on + strand at 83.396 kb on + strand at 83.396 kb on + strand at 83.396 kb on + strand at 83.396 kb on + strand at 83.396 kb on + strand at 83.396 kb on + strand at 83.396 kb on + strand at 83.396 kb on + strand at 83.396 kb on + strand at 83.396 kb on + strand at 83.396 kb on + strand at 83.396 kb on + strand at 83.396 kb on + strand at 83.396 kb on + strand at 83.396 kb on + strand at 83.396 kb on + strand at 83.396 kb on + strand at 83.396 kb on + strand at 83.396 kb on + strand at 83.396 kb on + strand at 83.396 kb on + strand at 83.396 kb on + strand at 83.396 kb on + strand at 83.397 kb on - strand at 83.397 kb on - strand at 83.397 kb on - strand at 83.397 kb on - strand at 83.397 kb on - strand at 83.397 kb on - strand at 83.397 kb on - strand at 83.397 kb on - strand at 83.397 kb on - strand at 83.397 kb on - strand at 83.397 kb on - strand at 83.397 kb on - strand at 83.397 kb on - strand at 83.397 kb on - strand at 83.397 kb on - strand at 83.397 kb on - strand at 83.397 kb on - strand at 83.397 kb on - strand at 83.397 kb on - strand at 83.397 kb on - strand at 83.397 kb on - strand at 83.397 kb on - strand at 83.397 kb on - strand at 83.397 kb on - strand at 83.400 kb on + strand at 83.400 kb on + strand at 83.400 kb on + strand at 83.400 kb on + strand at 83.400 kb on + strand at 83.400 kb on + strand at 83.400 kb on + strand at 83.400 kb on + strand at 83.400 kb on + strand at 83.400 kb on + strand at 83.400 kb on + strand at 83.400 kb on + strand at 83.400 kb on + strand at 83.400 kb on + strand at 83.401 kb on - strand at 83.401 kb on - strand at 83.401 kb on - strand at 83.401 kb on - strand at 83.401 kb on - strand at 83.401 kb on - strand at 83.401 kb on - strand at 83.401 kb on - strand at 83.401 kb on - strand at 83.401 kb on - strand at 83.401 kb on - strand at 83.401 kb on - strand at 83.401 kb on - strand at 83.707 kb on + strand, within MPMX19_00078 at 83.707 kb on + strand, within MPMX19_00078 at 83.707 kb on + strand, within MPMX19_00078 at 83.707 kb on + strand, within MPMX19_00078 at 83.708 kb on - strand, within MPMX19_00078 at 83.708 kb on - strand, within MPMX19_00078 at 83.708 kb on - strand, within MPMX19_00078 at 83.708 kb on - strand, within MPMX19_00078 at 83.708 kb on - strand, within MPMX19_00078 at 83.708 kb on - strand, within MPMX19_00078 at 83.708 kb on - strand, within MPMX19_00078 at 83.728 kb on + strand, within MPMX19_00078 at 83.728 kb on + strand, within MPMX19_00078 at 83.728 kb on + strand, within MPMX19_00078 at 83.729 kb on - strand, within MPMX19_00078 at 83.752 kb on + strand, within MPMX19_00078 at 83.828 kb on + strand, within MPMX19_00078 at 83.828 kb on + strand, within MPMX19_00078 at 83.828 kb on + strand, within MPMX19_00078 at 83.828 kb on + strand, within MPMX19_00078 at 83.829 kb on - strand, within MPMX19_00078 at 83.829 kb on - strand, within MPMX19_00078 at 83.829 kb on - strand, within MPMX19_00078 at 83.829 kb on - strand, within MPMX19_00078 at 83.829 kb on - strand, within MPMX19_00078 at 83.882 kb on - strand, within MPMX19_00078 at 84.337 kb on + strand at 84.337 kb on + strand at 84.338 kb on - strand at 84.338 kb on - strand at 84.338 kb on - strand at 84.347 kb on + strand at 84.348 kb on - strand at 84.348 kb on - strand at 84.348 kb on - strand at 84.348 kb on - strand at 84.348 kb on - strand at 84.380 kb on + strand at 84.380 kb on + strand at 84.380 kb on + strand at 84.380 kb on + strand at 84.381 kb on - strand at 84.381 kb on - strand at 84.381 kb on - strand at 84.381 kb on - strand at 84.381 kb on - strand at 84.381 kb on - strand at 84.381 kb on - strand at 84.381 kb on - strand at 84.381 kb on - strand at 86.777 kb on + strand at 86.778 kb on - strand at 86.778 kb on - strand at 86.778 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.1 remove 83,396 + +0.1 83,396 + -0.9 83,396 + -0.1 83,396 + -1.6 83,396 + -1.1 83,396 + -1.2 83,396 + -1.1 83,396 + +0.1 83,396 + +0.1 83,396 + -0.1 83,396 + +0.7 83,396 + -0.1 83,396 + -1.2 83,396 + +0.2 83,396 + +0.3 83,396 + -0.7 83,396 + -0.7 83,396 + +0.8 83,396 + +0.1 83,396 + -0.2 83,396 + -0.4 83,396 + -1.7 83,396 + -1.1 83,396 + -0.9 83,396 + -0.3 83,396 + +0.1 83,396 + -1.4 83,396 + -1.3 83,397 - +0.3 83,397 - +0.5 83,397 - +0.1 83,397 - -0.9 83,397 - +0.1 83,397 - -1.6 83,397 - -3.0 83,397 - -1.3 83,397 - +0.1 83,397 - -0.4 83,397 - -0.1 83,397 - +0.2 83,397 - -1.3 83,397 - -1.5 83,397 - +0.1 83,397 - -0.3 83,397 - +1.7 83,397 - +0.3 83,397 - -0.9 83,397 - -1.9 83,397 - -1.0 83,397 - +0.1 83,397 - -1.3 83,397 - +0.6 83,400 + -2.1 83,400 + +0.3 83,400 + +0.0 83,400 + -1.3 83,400 + +0.1 83,400 + +0.1 83,400 + +0.3 83,400 + -0.9 83,400 + -1.1 83,400 + -0.4 83,400 + -2.5 83,400 + +0.4 83,400 + -0.2 83,400 + -1.1 83,401 - +0.1 83,401 - -3.3 83,401 - +0.7 83,401 - +0.3 83,401 - -0.4 83,401 - +0.1 83,401 - -0.3 83,401 - -0.3 83,401 - -2.5 83,401 - -1.4 83,401 - -1.0 83,401 - -0.0 83,401 - -0.5 83,707 + MPMX19_00078 0.31 -1.3 83,707 + MPMX19_00078 0.31 -1.7 83,707 + MPMX19_00078 0.31 -2.4 83,707 + MPMX19_00078 0.31 -0.4 83,708 - MPMX19_00078 0.31 -0.1 83,708 - MPMX19_00078 0.31 -2.2 83,708 - MPMX19_00078 0.31 -0.4 83,708 - MPMX19_00078 0.31 -0.6 83,708 - MPMX19_00078 0.31 -0.5 83,708 - MPMX19_00078 0.31 +0.7 83,708 - MPMX19_00078 0.31 -0.7 83,728 + MPMX19_00078 0.34 +0.4 83,728 + MPMX19_00078 0.34 -0.9 83,728 + MPMX19_00078 0.34 -1.5 83,729 - MPMX19_00078 0.34 -1.3 83,752 + MPMX19_00078 0.36 -0.3 83,828 + MPMX19_00078 0.44 +0.0 83,828 + MPMX19_00078 0.44 -1.4 83,828 + MPMX19_00078 0.44 +0.4 83,828 + MPMX19_00078 0.44 -0.8 83,829 - MPMX19_00078 0.45 -1.4 83,829 - MPMX19_00078 0.45 -0.1 83,829 - MPMX19_00078 0.45 -1.4 83,829 - MPMX19_00078 0.45 -0.0 83,829 - MPMX19_00078 0.45 -1.1 83,882 - MPMX19_00078 0.50 +0.6 84,337 + -0.4 84,337 + -1.9 84,338 - -0.7 84,338 - -1.9 84,338 - -0.1 84,347 + +0.7 84,348 - -1.1 84,348 - -0.1 84,348 - +0.2 84,348 - +0.1 84,348 - -2.1 84,380 + -1.3 84,380 + +0.4 84,380 + +0.1 84,380 + +0.9 84,381 - -0.0 84,381 - -1.2 84,381 - -0.0 84,381 - +0.1 84,381 - +0.6 84,381 - -0.7 84,381 - +0.1 84,381 - -0.7 84,381 - +0.1 86,777 + -0.3 86,778 - -0.8 86,778 - -2.0 86,778 - -0.1
Or see this region's nucleotide sequence