Strain Fitness in Sphingobium sp. HT1-2 around GFF5078

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
5,070,914	+				-1.5
5,070,919	+				-1.0
5,070,922	-				-0.2
5,070,927	+				-2.3
5,070,932	+				+1.0
5,070,932	+				+2.1
5,070,932	+				-0.7
5,070,932	+				-1.4
5,070,932	+				-0.2
5,070,932	+				+0.1
5,070,932	+				+0.8
5,070,932	+				+0.6
5,070,932	+				-1.3
5,070,932	+				+0.9
5,070,932	+				-2.4
5,070,932	+				+1.1
5,070,932	+				-0.9
5,070,932	+				+1.9
5,070,932	+				-2.7
5,070,932	+				-2.4
5,070,932	+				-0.1
5,070,932	+				+0.0
5,070,932	+				+0.1
5,070,932	+				-0.4
5,070,932	+				-1.6
5,070,932	+				+0.0
5,070,932	+				+2.1
5,070,932	+				+0.6
5,070,932	-				-0.7
5,070,940	-				-0.6
5,070,940	-				-0.4
5,070,940	-				-0.6
5,070,940	-				-1.7
5,070,940	-				+0.4
5,070,940	-				+0.3
5,070,940	-				+0.4
5,070,940	-				+0.6
5,070,940	-				+0.1
5,070,940	-				+0.6
5,070,940	-				+1.7
5,070,940	-				-0.9
5,070,940	-				-2.0
5,070,940	-				-1.1
5,070,940	-				+1.4
5,070,940	-				+0.1
5,070,940	-				-0.0
5,070,940	-				-1.1
5,070,940	-				-1.9
5,070,940	-				-0.2
5,070,940	-				-0.4
5,070,940	-				+0.8
5,070,940	-				-0.6
5,070,940	-				+0.5
5,070,940	-				-0.3
5,070,940	-				-0.8
5,070,942	+				-1.4
5,070,942	+				-0.3
5,070,942	+				-0.6
5,070,942	+				-1.4
5,070,942	+				-0.3
5,070,950	+				-0.3
5,070,950	-				+0.5
5,070,950	-				+0.5
5,070,950	-				-0.4
5,070,950	-				+0.4
5,070,950	-				-0.1
5,070,950	-				-0.9
5,070,952	+				-1.8
5,070,963	+				-0.7
5,070,963	+				+0.6
5,070,964	+				-1.6
5,070,968	+				+0.9
5,070,971	-				+0.2
5,070,985	+				+1.0
5,070,985	+				-1.3
5,070,985	+				+1.2
5,070,985	+				-0.9
5,070,990	+				-0.6
5,070,990	+				-0.5
5,070,990	+				+0.3
5,070,990	+				+0.7
5,070,993	-				+2.4
5,070,993	-				-1.2
5,070,993	-				+0.1
5,070,993	-				-1.3
5,070,998	+				+0.3
5,070,999	+				+0.0
5,071,007	-				+0.1
5,071,024	+				-0.7
5,071,024	+				-0.5
5,071,027	-				-1.0
5,071,032	-				-0.8
5,071,034	+				+0.1
5,071,034	+				+1.1
5,071,042	+				+0.4
5,071,042	+				-0.7
5,071,042	+				+1.2
5,071,042	+				+0.8
5,071,044	+				-1.4
5,071,044	+				-0.6
5,071,044	+				-0.8
5,071,044	+				+0.8
5,071,044	+				-1.6
5,071,044	+				-0.5
5,071,044	+				-0.3
5,071,044	+				+0.9
5,071,044	+				-1.4
5,071,044	+				+0.3
5,071,044	+				+0.1
5,071,044	+				-0.9
5,071,044	+				-1.3
5,071,047	+				+0.0
5,071,050	-				-0.3
5,071,050	-				-0.9
5,071,052	-				+0.1
5,071,052	-				-1.4
5,071,052	-				-0.6
5,071,052	-				-0.7
5,071,052	-				+0.5
5,071,052	-				-2.0
5,071,054	+				+0.1
5,071,054	+				-0.3
5,071,054	+				-0.1
5,071,054	+				+0.0
5,071,054	+				+0.3
5,071,054	+				-0.4
5,071,054	+				-0.0
5,071,054	+				-0.9
5,071,055	+				+1.8
5,071,062	-				-1.2
5,071,062	-				-1.2
5,071,062	-				+0.1
5,071,062	-				-0.9
5,071,062	-				-0.4
5,071,062	-				+0.6
5,071,062	-				-0.3
5,071,070	+				-1.1
5,071,080	+				-0.1
5,071,082	+				+0.1
5,071,088	-				-1.0
5,071,088	-				-0.5
5,071,088	-				-1.7
5,071,092	+				-0.1
5,071,101	+				-0.9
5,071,102	+				-0.9
5,071,110	-				-1.1
5,071,110	-				+0.8
5,071,111	+				+0.1
5,071,134	-		GFF5076	0.14	-0.9
5,071,136	+		GFF5076	0.14	-1.0
5,071,136	+		GFF5076	0.14	+0.9
5,071,136	+		GFF5076	0.14	+0.1
5,071,136	+		GFF5076	0.14	-2.1
5,071,136	+		GFF5076	0.14	-0.4
5,071,136	+		GFF5076	0.14	+0.9
5,071,136	+		GFF5076	0.14	-0.7
5,071,136	+		GFF5076	0.14	-0.3
5,071,136	+		GFF5076	0.14	+0.6
5,071,136	+		GFF5076	0.14	-1.5
5,071,136	+		GFF5076	0.14	+0.4
5,071,136	+		GFF5076	0.14	+0.4
5,071,136	+		GFF5076	0.14	-0.7
5,071,136	+		GFF5076	0.14	-1.6
5,071,143	+		GFF5076	0.16	-0.7
5,071,143	+		GFF5076	0.16	-0.8
5,071,143	+		GFF5076	0.16	-0.5
5,071,143	+		GFF5076	0.16	+0.2
5,071,143	+		GFF5076	0.16	-0.6
5,071,143	+		GFF5076	0.16	+0.9
5,071,143	+		GFF5076	0.16	-2.2
5,071,143	+		GFF5076	0.16	+0.3
5,071,143	+		GFF5076	0.16	-1.5
5,071,143	+		GFF5076	0.16	-0.3
5,071,143	+		GFF5076	0.16	-3.0
5,071,143	+		GFF5076	0.16	-0.1
5,071,143	+		GFF5076	0.16	+0.1
5,071,143	+		GFF5076	0.16	-0.2
5,071,143	+		GFF5076	0.16	-1.7
5,071,143	+		GFF5076	0.16	+0.3
5,071,143	+		GFF5076	0.16	-1.5
5,071,143	+		GFF5076	0.16	+0.3
5,071,143	+		GFF5076	0.16	+0.7
5,071,144	-		GFF5076	0.17	+0.4
5,071,144	-		GFF5076	0.17	+1.4
5,071,144	-		GFF5076	0.17	-1.5
5,071,144	-		GFF5076	0.17	-0.4
5,071,144	-		GFF5076	0.17	+0.6
5,071,144	-		GFF5076	0.17	-1.4
5,071,144	-		GFF5076	0.17	-1.2
5,071,144	-		GFF5076	0.17	-0.2
5,071,144	-		GFF5076	0.17	-1.6
5,071,144	-		GFF5076	0.17	+2.5
5,071,144	-		GFF5076	0.17	+0.1
5,071,144	-		GFF5076	0.17	+0.1
5,071,144	-		GFF5076	0.17	-1.1
5,071,144	-		GFF5076	0.17	-0.0
5,071,144	-		GFF5076	0.17	-1.1
5,071,144	-		GFF5076	0.17	+1.1
5,071,144	-		GFF5076	0.17	-1.6
5,071,144	-		GFF5076	0.17	-1.3
5,071,144	-		GFF5076	0.17	-1.3
5,071,144	-		GFF5076	0.17	-0.5
5,071,144	-		GFF5076	0.17	+0.2
5,071,144	-		GFF5076	0.17	+0.9
5,071,144	-		GFF5076	0.17	+0.1
5,071,144	-		GFF5076	0.17	+0.3
5,071,144	-		GFF5076	0.17	-2.3
5,071,144	-		GFF5076	0.17	-1.0
5,071,144	-		GFF5076	0.17	+0.4
5,071,144	-		GFF5076	0.17	+0.0
5,071,144	-		GFF5076	0.17	+0.1
5,071,144	-		GFF5076	0.17	-1.3
5,071,144	-		GFF5076	0.17	+0.5
5,071,144	-		GFF5076	0.17	-0.0
5,071,144	-		GFF5076	0.17	-0.4
5,071,144	-		GFF5076	0.17	-0.5
5,071,151	-		GFF5076	0.19	+1.3
5,071,151	-		GFF5076	0.19	-1.4
5,071,151	-		GFF5076	0.19	+0.5
5,071,151	-		GFF5076	0.19	+0.6
5,071,151	-		GFF5076	0.19	-0.3
5,071,151	-		GFF5076	0.19	-3.0
5,071,151	-		GFF5076	0.19	-1.9
5,071,151	-		GFF5076	0.19	-0.5
5,071,151	-		GFF5076	0.19	-0.2
5,071,151	-		GFF5076	0.19	-0.9
5,071,151	-		GFF5076	0.19	+0.1
5,071,151	-		GFF5076	0.19	-1.1
5,071,151	-		GFF5076	0.19	+1.2
5,071,151	-		GFF5076	0.19	-1.0
5,071,151	-		GFF5076	0.19	+0.1
5,071,151	-		GFF5076	0.19	+1.2
5,071,153	+		GFF5076	0.19	-1.0
5,071,160	+		GFF5076	0.21	-0.7
5,071,160	+		GFF5076	0.21	+0.7
5,071,160	+		GFF5076	0.21	-0.0
5,071,160	+		GFF5076	0.21	-1.5
5,071,160	+		GFF5076	0.21	+0.3
5,071,160	+		GFF5076	0.21	-0.2
5,071,161	-		GFF5076	0.21	+0.3
5,071,163	-		GFF5076	0.22	-0.1
5,071,168	-		GFF5076	0.23	+0.5
5,071,168	-		GFF5076	0.23	-1.9
5,071,168	-		GFF5076	0.23	-1.2
5,071,170	+		GFF5076	0.24	+0.2
5,071,170	+		GFF5076	0.24	+0.2
5,071,178	+		GFF5076	0.26	-1.7
5,071,186	-		GFF5076	0.29	-1.1
5,071,188	-		GFF5076	0.29	-0.5
5,071,188	-		GFF5076	0.29	-0.1
5,071,198	+		GFF5076	0.32	-3.0
5,071,223	+		GFF5076	0.39	-0.9
5,071,223	-		GFF5076	0.39	+0.5
5,071,243	+		GFF5076	0.45	+0.3
5,071,243	+		GFF5076	0.45	-0.2
5,071,249	+		GFF5076	0.46	-0.4
5,071,249	+		GFF5076	0.46	-0.3
5,071,251	-		GFF5076	0.47	-0.7
5,071,257	-		GFF5076	0.49	+1.7
5,071,257	-		GFF5076	0.49	-2.4
5,071,257	-		GFF5076	0.49	-0.4
5,071,257	-		GFF5076	0.49	+0.4
5,071,257	-		GFF5076	0.49	+0.8
5,071,273	+		GFF5076	0.53	-0.8
5,071,273	+		GFF5076	0.53	-0.1
5,071,273	+		GFF5076	0.53	+0.7
5,071,273	+		GFF5076	0.53	-0.4
5,071,273	+		GFF5076	0.53	+2.1
5,071,273	+		GFF5076	0.53	-1.8
5,071,273	+		GFF5076	0.53	-2.4
5,071,273	+		GFF5076	0.53	-0.7
5,071,273	+		GFF5076	0.53	-0.5
5,071,281	-		GFF5076	0.55	+0.7
5,071,281	-		GFF5076	0.55	+0.9
5,071,281	-		GFF5076	0.55	+1.0
5,071,281	-		GFF5076	0.55	-1.1
5,071,281	-		GFF5076	0.55	+0.3
5,071,281	-		GFF5076	0.55	-1.1
5,071,281	-		GFF5076	0.55	-0.5
5,071,281	-		GFF5076	0.55	-0.4
5,071,281	-		GFF5076	0.55	+0.7
5,071,304	-		GFF5076	0.62	-0.7
5,071,314	-		GFF5076	0.65	-0.9
5,071,325	-		GFF5076	0.68	+0.4
5,071,339	+		GFF5076	0.72	-0.3
5,071,343	+		GFF5076	0.73	-0.8
5,071,346	-		GFF5076	0.74	+1.1
5,071,348	+		GFF5076	0.74	-0.3
5,071,353	+		GFF5076	0.76	-1.4
5,071,356	-		GFF5076	0.77	+1.1
5,071,356	-		GFF5076	0.77	-1.2
5,071,356	-		GFF5076	0.77	-1.8
5,071,358	+		GFF5076	0.77	-0.7
5,071,358	+		GFF5076	0.77	+1.1
5,071,364	+		GFF5076	0.79	-0.1
5,071,367	+		GFF5076	0.80	-0.9
5,071,368	+		GFF5076	0.80	+1.2
5,071,368	+		GFF5076	0.80	+0.6
5,071,368	+		GFF5076	0.80	-0.0
5,071,368	+		GFF5076	0.80	-0.4
5,071,368	+		GFF5076	0.80	-0.1
5,071,368	+		GFF5076	0.80	+0.0
5,071,368	+		GFF5076	0.80	+0.9
5,071,375	-		GFF5076	0.82	-0.4
5,071,376	-		GFF5076	0.82	+1.0
5,071,376	-		GFF5076	0.82	-1.2
5,071,376	-		GFF5076	0.82	+0.1
5,071,376	-		GFF5076	0.82	+0.5
5,071,376	-		GFF5076	0.82	+1.8
5,071,376	-		GFF5076	0.82	+0.9
5,071,376	-		GFF5076	0.82	-1.9
5,071,376	-		GFF5076	0.82	-0.7
5,071,376	-		GFF5076	0.82	-0.1
5,071,376	-		GFF5076	0.82	-1.1
5,071,376	-		GFF5076	0.82	-0.1
5,071,376	-		GFF5076	0.82	-0.4
5,071,376	-		GFF5076	0.82	-0.1
5,071,376	-		GFF5076	0.82	-0.6
5,071,376	-		GFF5076	0.82	-0.6
5,071,384	+		GFF5076	0.84	-1.6
5,071,385	+		GFF5076	0.85	+0.7
5,071,401	+		GFF5076	0.89	+1.0
5,071,418	-				-0.7
5,071,419	-				+1.1
5,071,420	-				-0.2
5,071,433	+				-1.1
5,071,433	+				+0.7
5,071,433	+				+1.0
5,071,439	+				-2.7
5,071,439	+				-1.9
5,071,439	+				-0.3
5,071,439	+				-0.4
5,071,439	+				-0.2
5,071,441	-				+0.3
5,071,447	-				+0.5
5,071,447	-				+0.4
5,071,447	-				+1.0
5,071,447	-				-1.1
5,071,447	-				-1.8
5,071,447	-				+0.7
5,071,447	-				-2.0
5,071,447	-				-0.8
5,071,462	-				+0.0
5,071,510	-		GFF5077	0.16	-0.7
5,071,512	+		GFF5077	0.17	-1.7
5,071,527	-		GFF5077	0.20	+0.3
5,071,544	-		GFF5077	0.24	-2.1
5,071,546	+		GFF5077	0.24	+0.6
5,071,546	+		GFF5077	0.24	+0.1
5,071,552	-		GFF5077	0.25	-0.0
5,071,554	-		GFF5077	0.26	-2.0
5,071,554	-		GFF5077	0.26	-0.4
5,071,554	-		GFF5077	0.26	-0.1
5,071,578	-		GFF5077	0.31	+0.6
5,071,580	-		GFF5077	0.31	-0.4
5,071,587	+		GFF5077	0.33	+0.6
5,071,587	+		GFF5077	0.33	+0.8
5,071,595	-		GFF5077	0.35	+0.2
5,071,603	+		GFF5077	0.36	+0.3
5,071,605	+		GFF5077	0.37	+0.1
5,071,605	+		GFF5077	0.37	+0.2
5,071,605	+		GFF5077	0.37	-0.3
5,071,613	-		GFF5077	0.39	+1.1
5,071,633	-		GFF5077	0.43	+0.7
5,071,633	-		GFF5077	0.43	-2.2
5,071,635	-		GFF5077	0.43	+0.3
5,071,648	+		GFF5077	0.46	-0.5
5,071,655	+		GFF5077	0.48	+0.7
5,071,663	-		GFF5077	0.49	+0.0
5,071,714	-		GFF5077	0.60	-0.5
5,071,720	-		GFF5077	0.62	+0.4
5,071,735	-		GFF5077	0.65	+2.1
5,071,735	-		GFF5077	0.65	-0.7
5,071,735	-		GFF5077	0.65	-1.3
5,071,996	+				-0.6
5,071,996	+				-2.2
5,072,004	-				-0.7
5,072,004	-				-1.6
5,072,004	-				+0.0
5,072,006	-				-0.9
5,072,068	+		GFF5078	0.14	-1.1
5,072,453	-		GFF5078	0.47	-1.3
5,072,972	-				-0.3
5,073,010	+				-1.4
5,073,089	-				-1.2
5,073,117	+				-1.0
5,073,145	+				-2.7
5,073,158	-				+0.2
5,073,160	+				-0.3
5,073,160	+				-1.6
5,073,168	-				+0.9
5,073,179	-				-1.2
5,073,188	+				-1.7
5,073,196	-				-1.0
5,073,254	+		GFF5079	0.14	-0.3
5,073,254	+		GFF5079	0.14	-1.3
5,073,262	-		GFF5079	0.15	+0.5
5,073,319	+		GFF5079	0.20	-0.6
5,073,396	-		GFF5079	0.26	-1.0
5,073,419	+		GFF5079	0.28	-2.3
5,073,419	+		GFF5079	0.28	-1.2
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5,073,498	-		GFF5079	0.35	-1.4
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5,073,511	-		GFF5079	0.36	-1.2
5,073,577	+		GFF5079	0.42	-0.5
5,073,595	+		GFF5079	0.43	+0.1
5,073,640	-		GFF5079	0.47	-0.6
5,073,653	-		GFF5079	0.48	-0.8
5,073,686	-		GFF5079	0.51	+1.2
5,073,771	+		GFF5079	0.58	-0.7
5,073,771	+		GFF5079	0.58	-0.6
5,073,779	-		GFF5079	0.59	-1.2
5,073,779	-		GFF5079	0.59	-0.6
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5,073,809	+		GFF5079	0.61	-0.8
5,073,848	+		GFF5079	0.65	+0.1
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5,073,856	-		GFF5079	0.65	-1.0
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5,073,856	-		GFF5079	0.65	-2.1
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5,073,856	-		GFF5079	0.65	-0.9
5,073,858	+		GFF5079	0.66	-1.1
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5,073,866	-		GFF5079	0.66	-1.9
5,073,866	-		GFF5079	0.66	-2.1
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5,073,866	-		GFF5079	0.66	-1.2
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5,073,866	-		GFF5079	0.66	-1.9
5,073,871	-		GFF5079	0.67	-2.2
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5,073,883	-		GFF5079	0.68	-1.5
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5,073,909	+		GFF5079	0.70	-1.6
5,073,927	-		GFF5079	0.72	-1.0
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5,073,951	-		GFF5079	0.74	-1.5