Strain Fitness in Sphingobium sp. HT1-2 around GFF4964

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
4,960,853	+		GFF4963	0.50	-2.2
4,960,884	+		GFF4963	0.52	-2.4
4,960,886	-		GFF4963	0.52	-0.6
4,960,889	+		GFF4963	0.52	+0.8
4,960,914	-		GFF4963	0.54	+0.2
4,960,915	+		GFF4963	0.54	+0.7
4,960,917	+		GFF4963	0.54	+0.1
4,960,923	+		GFF4963	0.54	+0.2
4,960,924	+		GFF4963	0.54	+1.3
4,960,932	-		GFF4963	0.55	-2.1
4,960,942	+		GFF4963	0.55	-1.1
4,960,942	+		GFF4963	0.55	-1.7
4,960,950	-		GFF4963	0.56	+0.3
4,960,950	-		GFF4963	0.56	-0.7
4,960,964	-		GFF4963	0.56	-0.2
4,960,974	-		GFF4963	0.57	-1.8
4,960,979	-		GFF4963	0.57	-0.1
4,960,981	+		GFF4963	0.57	-2.6
4,960,981	+		GFF4963	0.57	+0.7
4,960,981	+		GFF4963	0.57	-0.9
4,960,981	+		GFF4963	0.57	+0.6
4,960,981	+		GFF4963	0.57	-2.5
4,960,981	+		GFF4963	0.57	-1.7
4,960,981	+		GFF4963	0.57	-0.3
4,960,981	+		GFF4963	0.57	-0.1
4,960,981	+		GFF4963	0.57	-0.6
4,960,989	-		GFF4963	0.58	+0.4
4,960,989	-		GFF4963	0.58	+0.7
4,960,989	-		GFF4963	0.58	-1.1
4,960,989	-		GFF4963	0.58	-0.4
4,960,989	-		GFF4963	0.58	-1.3
4,960,989	-		GFF4963	0.58	-1.2
4,960,989	-		GFF4963	0.58	-1.4
4,960,989	-		GFF4963	0.58	-0.9
4,960,989	-		GFF4963	0.58	-0.5
4,960,989	-		GFF4963	0.58	-0.3
4,960,989	-		GFF4963	0.58	+1.0
4,960,989	-		GFF4963	0.58	-0.1
4,960,989	-		GFF4963	0.58	-1.6
4,960,989	-		GFF4963	0.58	-1.2
4,960,994	-		GFF4963	0.58	-0.9
4,961,027	+		GFF4963	0.60	+0.9
4,961,027	+		GFF4963	0.60	+0.0
4,961,027	+		GFF4963	0.60	+0.5
4,961,027	+		GFF4963	0.60	-0.2
4,961,027	+		GFF4963	0.60	-0.5
4,961,027	+		GFF4963	0.60	+1.1
4,961,027	+		GFF4963	0.60	+0.1
4,961,027	+		GFF4963	0.60	-0.9
4,961,027	+		GFF4963	0.60	-0.1
4,961,027	+		GFF4963	0.60	-0.3
4,961,027	+		GFF4963	0.60	+0.0
4,961,027	+		GFF4963	0.60	+0.2
4,961,027	+		GFF4963	0.60	-1.5
4,961,028	+		GFF4963	0.60	-0.5
4,961,030	-		GFF4963	0.60	-0.1
4,961,035	-		GFF4963	0.60	-0.1
4,961,035	-		GFF4963	0.60	-0.4
4,961,035	-		GFF4963	0.60	-0.4
4,961,035	-		GFF4963	0.60	+0.0
4,961,035	-		GFF4963	0.60	-1.3
4,961,035	-		GFF4963	0.60	+0.6
4,961,035	-		GFF4963	0.60	-0.5
4,961,035	-		GFF4963	0.60	-2.7
4,961,035	-		GFF4963	0.60	+0.2
4,961,035	-		GFF4963	0.60	-0.1
4,961,037	+		GFF4963	0.60	-1.1
4,961,037	+		GFF4963	0.60	-0.8
4,961,037	+		GFF4963	0.60	+0.2
4,961,037	+		GFF4963	0.60	-0.5
4,961,045	-		GFF4963	0.61	-0.2
4,961,045	-		GFF4963	0.61	-0.3
4,961,045	-		GFF4963	0.61	-0.2
4,961,045	-		GFF4963	0.61	-0.9
4,961,045	-		GFF4963	0.61	+0.6
4,961,045	-		GFF4963	0.61	+0.7
4,961,055	-		GFF4963	0.61	-0.1
4,961,057	+		GFF4963	0.61	-0.8
4,961,068	+		GFF4963	0.62	-0.9
4,961,068	+		GFF4963	0.62	+0.2
4,961,076	-		GFF4963	0.62	-0.4
4,961,076	-		GFF4963	0.62	-0.7
4,961,088	-		GFF4963	0.63	-0.2
4,961,151	+		GFF4963	0.67	+0.0
4,961,159	-		GFF4963	0.67	+0.6
4,961,159	-		GFF4963	0.67	-0.0
4,961,193	+		GFF4963	0.69	-0.2
4,961,197	-		GFF4963	0.69	-1.3
4,961,258	+		GFF4963	0.72	-1.6
4,961,329	+		GFF4963	0.76	-2.0
4,961,329	+		GFF4963	0.76	-0.2
4,961,329	+		GFF4963	0.76	-1.0
4,961,329	+		GFF4963	0.76	+0.1
4,961,329	+		GFF4963	0.76	-1.0
4,961,337	-		GFF4963	0.77	+0.7
4,961,337	-		GFF4963	0.77	-0.4
4,961,337	-		GFF4963	0.77	-2.1
4,961,350	+		GFF4963	0.78	-0.1
4,961,357	-		GFF4963	0.78	-1.3
4,961,358	-		GFF4963	0.78	-0.1
4,961,386	-		GFF4963	0.79	-0.9
4,961,410	+		GFF4963	0.81	+0.4
4,961,410	+		GFF4963	0.81	+0.7
4,961,415	+		GFF4963	0.81	-0.6
4,961,418	-		GFF4963	0.81	+0.7
4,961,433	-		GFF4963	0.82	-0.4
4,961,433	-		GFF4963	0.82	-0.1
4,961,433	-		GFF4963	0.82	-2.3
4,961,443	-		GFF4963	0.83	+0.0
4,961,443	-		GFF4963	0.83	-0.1
4,961,454	+		GFF4963	0.83	-0.8
4,961,468	-		GFF4963	0.84	-0.6
4,961,476	+		GFF4963	0.84	-1.3
4,961,476	+		GFF4963	0.84	-0.1
4,961,476	+		GFF4963	0.84	+0.3
4,961,560	-		GFF4963	0.89	-1.2
4,961,643	-				-0.4
4,961,648	-				+0.1
4,961,723	-				-0.1
4,961,817	+				+0.9
4,961,817	+				+0.2
4,961,848	+				+0.6
4,961,848	+				-2.4
4,961,906	+		GFF4964	0.12	-0.9
4,961,914	-		GFF4964	0.13	-0.9
4,961,918	+		GFF4964	0.13	-0.6
4,961,918	+		GFF4964	0.13	-0.9
4,961,926	-		GFF4964	0.14	-2.2
4,961,950	-		GFF4964	0.17	-0.1
4,961,950	-		GFF4964	0.17	-0.1
4,961,950	-		GFF4964	0.17	-1.1
4,961,950	-		GFF4964	0.17	-1.3
4,961,971	-		GFF4964	0.20	-2.4
4,961,983	-		GFF4964	0.22	-0.8
4,961,994	+		GFF4964	0.23	-0.8
4,962,000	+		GFF4964	0.24	-2.2
4,962,034	-		GFF4964	0.28	-2.4
4,962,040	-		GFF4964	0.29	-1.6
4,962,066	-		GFF4964	0.33	-2.9
4,962,068	+		GFF4964	0.33	-0.6
4,962,071	-		GFF4964	0.33	-1.0
4,962,076	-		GFF4964	0.34	-3.1
4,962,076	-		GFF4964	0.34	-2.2
4,962,101	-		GFF4964	0.37	+0.5
4,962,117	+		GFF4964	0.39	-2.4
4,962,125	-		GFF4964	0.40	-2.6
4,962,125	-		GFF4964	0.40	-2.7
4,962,127	+		GFF4964	0.41	-1.1
4,962,135	-		GFF4964	0.42	-0.6
4,962,135	-		GFF4964	0.42	-1.3
4,962,152	+		GFF4964	0.44	-2.8
4,962,152	+		GFF4964	0.44	-0.3
4,962,154	+		GFF4964	0.44	-1.2
4,962,156	+		GFF4964	0.44	-1.3
4,962,160	-		GFF4964	0.45	-2.6
4,962,160	-		GFF4964	0.45	-0.6
4,962,160	-		GFF4964	0.45	-0.3
4,962,160	-		GFF4964	0.45	+0.2
4,962,172	-		GFF4964	0.46	-0.7
4,962,172	-		GFF4964	0.46	-1.9
4,962,172	-		GFF4964	0.46	-0.9
4,962,186	-		GFF4964	0.48	-0.3
4,962,186	-		GFF4964	0.48	-0.3
4,962,191	-		GFF4964	0.49	+0.2
4,962,191	-		GFF4964	0.49	-1.2
4,962,191	-		GFF4964	0.49	-1.1
4,962,191	-		GFF4964	0.49	-2.1
4,962,191	-		GFF4964	0.49	-0.7
4,962,192	-		GFF4964	0.49	-0.6
4,962,221	-		GFF4964	0.53	-1.7
4,962,221	-		GFF4964	0.53	-1.7
4,962,235	+		GFF4964	0.55	-1.7
4,962,237	+		GFF4964	0.55	-0.8
4,962,250	-		GFF4964	0.57	-0.3
4,962,274	+		GFF4964	0.60	-2.2
4,962,292	+		GFF4964	0.62	-2.2
4,962,297	+		GFF4964	0.63	-0.9
4,962,350	+		GFF4964	0.70	-1.2
4,962,366	+		GFF4964	0.72	-0.8
4,962,372	+		GFF4964	0.73	-1.0
4,962,387	+		GFF4964	0.75	-1.1
4,962,387	+		GFF4964	0.75	+0.5
4,962,387	+		GFF4964	0.75	-2.1
4,962,387	+		GFF4964	0.75	-0.1
4,962,387	+		GFF4964	0.75	-0.5
4,962,387	+		GFF4964	0.75	-0.5
4,962,387	+		GFF4964	0.75	-1.1
4,962,387	+		GFF4964	0.75	-0.1
4,962,387	+		GFF4964	0.75	-2.9
4,962,392	+		GFF4964	0.75	+0.1
4,962,395	-		GFF4964	0.76	-0.7
4,962,395	-		GFF4964	0.76	-0.9
4,962,395	-		GFF4964	0.76	-1.1
4,962,395	-		GFF4964	0.76	-1.2
4,962,395	-		GFF4964	0.76	-1.6
4,962,395	-		GFF4964	0.76	-1.2
4,962,405	-		GFF4964	0.77	-0.9
4,962,410	-		GFF4964	0.78	-1.7
4,962,444	-		GFF4964	0.82	-0.7
4,962,453	-		GFF4964	0.83	-2.5
4,962,453	-		GFF4964	0.83	-1.2
4,962,454	+		GFF4964	0.83	-1.1
4,962,454	+		GFF4964	0.83	-1.1
4,962,462	-		GFF4964	0.85	-1.5
4,962,499	+		GFF4964	0.89	-0.6
4,962,503	+				-1.5
4,962,504	+				-1.2
4,962,529	-				-1.0
4,962,543	-				+0.2
4,962,543	-				-1.5
4,962,550	-				-1.6
4,962,570	+				-1.5
4,962,589	-				-1.3
4,962,597	+				-0.2
4,962,617	+				-0.4
4,962,648	-		GFF4965	0.11	-1.0
4,962,650	+		GFF4965	0.11	-2.7
4,962,650	+		GFF4965	0.11	+0.0
4,962,650	+		GFF4965	0.11	-1.5
4,962,650	+		GFF4965	0.11	-1.0
4,962,658	-		GFF4965	0.12	-1.1
4,962,658	-		GFF4965	0.12	-0.1
4,962,658	-		GFF4965	0.12	-0.1
4,962,658	-		GFF4965	0.12	-0.5
4,962,658	-		GFF4965	0.12	+0.2
4,962,661	+		GFF4965	0.12	+0.3
4,962,669	-		GFF4965	0.14	+0.8
4,962,669	-		GFF4965	0.14	-0.8
4,962,687	-		GFF4965	0.16	-0.6
4,962,729	-		GFF4965	0.22	-1.1
4,962,754	+		GFF4965	0.26	-0.7
4,962,787	+		GFF4965	0.31	-1.0
4,962,792	+		GFF4965	0.32	-1.4
4,962,800	-		GFF4965	0.33	-0.3
4,962,813	+		GFF4965	0.35	+0.8
4,962,813	+		GFF4965	0.35	+1.3
4,962,821	-		GFF4965	0.36	-0.4
4,962,825	+		GFF4965	0.36	-0.9
4,962,825	+		GFF4965	0.36	-0.7
4,962,825	+		GFF4965	0.36	-2.1
4,962,833	-		GFF4965	0.38	-1.1
4,962,833	-		GFF4965	0.38	-1.4
4,962,833	-		GFF4965	0.38	+0.3
4,962,844	-		GFF4965	0.39	+0.2
4,962,844	-		GFF4965	0.39	+0.0
4,962,847	+		GFF4965	0.40	-0.0
4,962,847	+		GFF4965	0.40	-0.5
4,962,855	-		GFF4965	0.41	-0.8
4,962,915	+		GFF4965	0.50	-2.6
4,962,915	+		GFF4965	0.50	-2.2
4,962,935	+		GFF4965	0.52	-0.1
4,962,943	-		GFF4965	0.54	+0.4
4,962,982	+		GFF4965	0.59	-1.7
4,963,003	-		GFF4965	0.62	-0.2
4,963,031	-		GFF4965	0.67	+1.3
4,963,032	-		GFF4965	0.67	-1.5
4,963,032	-		GFF4965	0.67	+1.2
4,963,032	-		GFF4965	0.67	+0.2
4,963,032	-		GFF4965	0.67	+0.7
4,963,041	-		GFF4965	0.68	-0.1
4,963,065	+		GFF4965	0.71	+0.7
4,963,073	-		GFF4965	0.73	-2.5
4,963,073	-		GFF4965	0.73	-1.9
4,963,088	-		GFF4965	0.75	-1.4
4,963,119	+		GFF4965	0.79	+1.3
4,963,146	+		GFF4965	0.83	-1.3
4,963,147	-		GFF4965	0.83	-0.2
4,963,147	-		GFF4965	0.83	+0.7
4,963,158	-		GFF4965	0.85	+0.1
4,963,158	-		GFF4965	0.85	-0.3
4,963,158	-		GFF4965	0.85	-2.0
4,963,158	-		GFF4965	0.85	-0.6
4,963,173	-		GFF4965	0.87	-0.2
4,963,203	-				+0.2
4,963,217	-				-2.1
4,963,222	-				-0.5
4,963,227	-				-1.0
4,963,230	+				-3.0
4,963,236	-				-0.5
4,963,238	+				-0.4
4,963,254	+				-0.9
4,963,257	-				-1.5
4,963,265	+				-1.2
4,963,266	+				-2.0
4,963,266	+				-0.3
4,963,274	-				+0.0
4,963,283	-				-1.6