Strain Fitness in Sphingobium sp. HT1-2 around GFF4747

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
4,746,106	-		GFF4746	0.60	-0.7
4,746,131	+		GFF4746	0.61	-0.5
4,746,137	+		GFF4746	0.62	-2.3
4,746,153	+		GFF4746	0.62	-1.6
4,746,163	-		GFF4746	0.63	-1.8
4,746,195	+		GFF4746	0.64	-0.9
4,746,197	-		GFF4746	0.64	+0.2
4,746,203	-		GFF4746	0.64	-0.9
4,746,203	-		GFF4746	0.64	-0.1
4,746,221	+		GFF4746	0.65	+1.6
4,746,221	+		GFF4746	0.65	+1.1
4,746,229	-		GFF4746	0.66	-2.4
4,746,229	-		GFF4746	0.66	-0.8
4,746,233	+		GFF4746	0.66	-0.6
4,746,239	-		GFF4746	0.66	+1.2
4,746,241	-		GFF4746	0.66	+0.4
4,746,246	-		GFF4746	0.66	-0.5
4,746,251	-		GFF4746	0.66	-0.4
4,746,253	-		GFF4746	0.67	-2.0
4,746,267	+		GFF4746	0.67	+0.7
4,746,269	-		GFF4746	0.67	+0.5
4,746,275	-		GFF4746	0.68	+1.1
4,746,275	-		GFF4746	0.68	-0.3
4,746,313	-		GFF4746	0.69	-0.8
4,746,313	-		GFF4746	0.69	-0.4
4,746,325	-		GFF4746	0.70	+0.2
4,746,360	+		GFF4746	0.71	-1.6
4,746,396	+		GFF4746	0.73	-0.7
4,746,412	-		GFF4746	0.73	+0.5
4,746,412	-		GFF4746	0.73	-0.5
4,746,412	-		GFF4746	0.73	+0.1
4,746,431	+		GFF4746	0.74	-1.6
4,746,435	-		GFF4746	0.74	-0.6
4,746,444	-		GFF4746	0.75	-0.7
4,746,444	-		GFF4746	0.75	+0.9
4,746,454	-		GFF4746	0.75	-2.3
4,746,465	+		GFF4746	0.76	-0.9
4,746,496	+		GFF4746	0.77	+0.2
4,746,540	+		GFF4746	0.79	-1.2
4,746,553	-		GFF4746	0.79	-0.8
4,746,640	-		GFF4746	0.83	-0.3
4,746,641	+		GFF4746	0.83	-0.7
4,746,641	+		GFF4746	0.83	+0.5
4,746,641	+		GFF4746	0.83	-0.4
4,746,649	+		GFF4746	0.83	-0.0
4,746,649	-		GFF4746	0.83	+0.7
4,746,649	-		GFF4746	0.83	-0.8
4,746,651	+		GFF4746	0.84	+0.2
4,746,668	+		GFF4746	0.84	-0.7
4,746,668	+		GFF4746	0.84	-0.1
4,746,668	+		GFF4746	0.84	-2.2
4,746,668	+		GFF4746	0.84	+0.5
4,746,668	+		GFF4746	0.84	+1.2
4,746,668	+		GFF4746	0.84	+1.0
4,746,668	+		GFF4746	0.84	-0.2
4,746,676	-		GFF4746	0.85	+1.2
4,746,676	-		GFF4746	0.85	+0.3
4,746,676	-		GFF4746	0.85	+0.9
4,746,676	-		GFF4746	0.85	-1.5
4,746,676	-		GFF4746	0.85	-0.8
4,746,676	-		GFF4746	0.85	+1.0
4,746,676	-		GFF4746	0.85	-1.0
4,746,676	-		GFF4746	0.85	-0.3
4,746,676	-		GFF4746	0.85	+0.9
4,746,676	-		GFF4746	0.85	-1.3
4,746,676	-		GFF4746	0.85	+0.5
4,746,676	-		GFF4746	0.85	+0.8
4,746,676	-		GFF4746	0.85	-0.9
4,746,676	-		GFF4746	0.85	-0.6
4,746,678	+		GFF4746	0.85	-1.7
4,746,688	+		GFF4746	0.85	+0.0
4,746,691	-		GFF4746	0.85	+0.1
4,746,710	-		GFF4746	0.86	-0.4
4,746,710	-		GFF4746	0.86	-1.0
4,746,759	-		GFF4746	0.88	+1.2
4,746,779	-		GFF4746	0.89	+0.0
4,746,806	+				+0.1
4,746,814	-				+0.7
4,746,833	+				-0.3
4,746,851	+				+0.7
4,746,851	+				-1.9
4,746,851	+				-0.1
4,746,865	-				-1.6
4,746,865	-				-2.1
4,746,877	+				-0.9
4,746,896	-				-1.1
4,746,899	+				-0.3
4,746,958	+				-0.1
4,746,958	+				-1.1
4,746,963	+				-0.6
4,746,963	+				+0.9
4,746,995	-				+0.4
4,747,007	+				+0.4
4,747,016	+				-0.3
4,747,016	+				-2.5
4,747,024	-				+0.6
4,747,042	+				+0.5
4,747,055	-				-0.9
4,747,055	-				-1.6
4,747,065	+				-0.8
4,747,065	+				-0.7
4,747,065	+				-0.6
4,747,073	-				-1.1
4,747,104	+				+0.1
4,747,119	+				-0.1
4,747,122	+				-1.2
4,747,137	-				+0.2
4,747,137	-				-0.6
4,747,137	-				-1.8
4,747,149	-		GFF4747	0.10	-2.1
4,747,162	+		GFF4747	0.11	-0.1
4,747,167	-		GFF4747	0.12	+1.0
4,747,171	+		GFF4747	0.12	+0.2
4,747,171	+		GFF4747	0.12	-0.7
4,747,171	-		GFF4747	0.12	-0.1
4,747,171	-		GFF4747	0.12	+1.2
4,747,207	+		GFF4747	0.15	-1.7
4,747,209	-		GFF4747	0.15	-2.0
4,747,216	-		GFF4747	0.16	-0.6
4,747,217	+		GFF4747	0.16	-1.7
4,747,217	+		GFF4747	0.16	+0.7
4,747,217	+		GFF4747	0.16	-0.1
4,747,222	+		GFF4747	0.16	+1.0
4,747,222	+		GFF4747	0.16	-2.7
4,747,224	+		GFF4747	0.17	+0.2
4,747,225	-		GFF4747	0.17	+0.8
4,747,225	-		GFF4747	0.17	+0.7
4,747,230	-		GFF4747	0.17	-0.3
4,747,264	+		GFF4747	0.20	+0.5
4,747,271	-		GFF4747	0.21	-0.7
4,747,271	-		GFF4747	0.21	-0.6
4,747,282	+		GFF4747	0.22	+0.4
4,747,282	+		GFF4747	0.22	+1.0
4,747,283	+		GFF4747	0.22	-0.1
4,747,290	-		GFF4747	0.22	-1.3
4,747,291	-		GFF4747	0.23	-1.1
4,747,291	-		GFF4747	0.23	+0.5
4,747,292	+		GFF4747	0.23	-1.4
4,747,292	+		GFF4747	0.23	-0.7
4,747,292	+		GFF4747	0.23	+0.0
4,747,292	+		GFF4747	0.23	-0.3
4,747,292	+		GFF4747	0.23	-0.5
4,747,292	+		GFF4747	0.23	-2.6
4,747,292	+		GFF4747	0.23	-0.5
4,747,292	+		GFF4747	0.23	-2.0
4,747,292	+		GFF4747	0.23	+1.4
4,747,300	-		GFF4747	0.23	+0.1
4,747,300	-		GFF4747	0.23	-2.5
4,747,300	-		GFF4747	0.23	+0.3
4,747,300	-		GFF4747	0.23	-0.3
4,747,304	+		GFF4747	0.24	-1.1
4,747,305	-		GFF4747	0.24	-2.6
4,747,314	+		GFF4747	0.25	-1.5
4,747,314	+		GFF4747	0.25	-1.2
4,747,322	-		GFF4747	0.25	-1.3
4,747,322	-		GFF4747	0.25	-1.8
4,747,332	+		GFF4747	0.26	+0.3
4,747,333	+		GFF4747	0.26	-1.2
4,747,333	+		GFF4747	0.26	-0.9
4,747,333	+		GFF4747	0.26	-0.0
4,747,333	+		GFF4747	0.26	-2.8
4,747,333	+		GFF4747	0.26	-0.4
4,747,341	-		GFF4747	0.27	-1.1
4,747,341	-		GFF4747	0.27	-0.2
4,747,341	-		GFF4747	0.27	+1.1
4,747,379	-		GFF4747	0.30	+0.5
4,747,387	+		GFF4747	0.31	-0.3
4,747,387	+		GFF4747	0.31	+0.1
4,747,404	+		GFF4747	0.32	-1.6
4,747,412	-		GFF4747	0.33	-0.5
4,747,412	-		GFF4747	0.33	-0.8
4,747,420	-		GFF4747	0.34	-0.0
4,747,420	-		GFF4747	0.34	-0.4
4,747,420	-		GFF4747	0.34	+0.1
4,747,420	-		GFF4747	0.34	+0.4
4,747,425	+		GFF4747	0.34	+0.2
4,747,427	+		GFF4747	0.34	-0.4
4,747,431	+		GFF4747	0.35	+1.1
4,747,433	-		GFF4747	0.35	+0.1
4,747,448	+		GFF4747	0.36	+1.9
4,747,448	+		GFF4747	0.36	+0.2
4,747,456	-		GFF4747	0.37	-0.0
4,747,456	-		GFF4747	0.37	+0.1
4,747,456	-		GFF4747	0.37	-1.7
4,747,456	-		GFF4747	0.37	+0.0
4,747,456	-		GFF4747	0.37	+0.6
4,747,482	+		GFF4747	0.39	+0.7
4,747,498	-		GFF4747	0.41	-0.8
4,747,528	-		GFF4747	0.43	-1.1
4,747,544	-		GFF4747	0.45	+1.0
4,747,544	-		GFF4747	0.45	-1.1
4,747,564	+		GFF4747	0.47	-1.9
4,747,564	+		GFF4747	0.47	-1.5
4,747,572	-		GFF4747	0.47	-1.8
4,747,572	-		GFF4747	0.47	-1.6
4,747,572	-		GFF4747	0.47	+0.5
4,747,572	-		GFF4747	0.47	+0.1
4,747,578	-		GFF4747	0.48	-1.8
4,747,589	+		GFF4747	0.49	-0.0
4,747,589	+		GFF4747	0.49	-0.0
4,747,589	+		GFF4747	0.49	+1.6
4,747,595	-		GFF4747	0.49	-0.1
4,747,597	-		GFF4747	0.49	-0.1
4,747,623	-		GFF4747	0.52	-1.7
4,747,623	-		GFF4747	0.52	-0.9
4,747,648	+		GFF4747	0.54	-0.4
4,747,648	+		GFF4747	0.54	+0.3
4,747,656	-		GFF4747	0.55	+0.6
4,747,656	-		GFF4747	0.55	+0.4
4,747,656	-		GFF4747	0.55	-2.7
4,747,656	-		GFF4747	0.55	+1.0
4,747,656	-		GFF4747	0.55	+0.6
4,747,656	-		GFF4747	0.55	-1.7
4,747,661	-		GFF4747	0.55	+0.3
4,747,675	+		GFF4747	0.56	+0.6
4,747,675	-		GFF4747	0.56	-0.1
4,747,685	+		GFF4747	0.57	-0.2
4,747,685	+		GFF4747	0.57	-0.9
4,747,693	-		GFF4747	0.58	-1.0
4,747,703	-		GFF4747	0.59	-0.1
4,747,726	+		GFF4747	0.61	-1.6
4,747,731	+		GFF4747	0.61	+0.3
4,747,739	-		GFF4747	0.62	-0.3
4,747,748	-		GFF4747	0.63	-0.9
4,747,758	-		GFF4747	0.64	-1.3
4,747,771	+		GFF4747	0.65	-1.0
4,747,773	-		GFF4747	0.65	-0.0
4,747,779	-		GFF4747	0.65	-0.2
4,747,779	-		GFF4747	0.65	-2.3
4,747,783	+		GFF4747	0.66	-0.7
4,747,783	+		GFF4747	0.66	-0.8
4,747,791	-		GFF4747	0.66	+1.6
4,747,818	+		GFF4747	0.69	-1.8
4,747,833	+		GFF4747	0.70	-1.2
4,747,833	+		GFF4747	0.70	+0.7
4,747,833	+		GFF4747	0.70	-0.4
4,747,833	+		GFF4747	0.70	+0.5
4,747,833	+		GFF4747	0.70	+0.1
4,747,833	+		GFF4747	0.70	-0.0
4,747,833	+		GFF4747	0.70	-0.2
4,747,833	+		GFF4747	0.70	+1.4
4,747,833	+		GFF4747	0.70	+0.3
4,747,833	+		GFF4747	0.70	-0.0
4,747,833	+		GFF4747	0.70	-0.4
4,747,841	-		GFF4747	0.71	-0.2
4,747,841	-		GFF4747	0.71	+0.5
4,747,841	-		GFF4747	0.71	-0.5
4,747,841	-		GFF4747	0.71	-0.5
4,747,841	-		GFF4747	0.71	+0.6
4,747,841	-		GFF4747	0.71	+0.2
4,747,841	-		GFF4747	0.71	-1.6
4,747,841	-		GFF4747	0.71	+0.6
4,747,841	-		GFF4747	0.71	+0.6
4,747,841	-		GFF4747	0.71	-0.3
4,747,841	-		GFF4747	0.71	+0.6
4,747,852	-		GFF4747	0.72	-0.1
4,747,875	+		GFF4747	0.74	-0.9
4,747,875	+		GFF4747	0.74	-1.8
4,747,875	+		GFF4747	0.74	+0.4
4,747,880	+		GFF4747	0.74	+0.9
4,747,880	+		GFF4747	0.74	+0.0
4,747,880	+		GFF4747	0.74	-0.6
4,747,883	-		GFF4747	0.75	+0.9
4,747,883	-		GFF4747	0.75	-1.6
4,747,900	+		GFF4747	0.76	+0.1
4,747,918	-		GFF4747	0.78	-0.7
4,747,931	-		GFF4747	0.79	-0.2
4,747,943	-		GFF4747	0.80	-1.8
4,747,947	+		GFF4747	0.80	+0.3
4,747,974	+		GFF4747	0.83	-0.5
4,747,974	+		GFF4747	0.83	-1.0
4,747,980	-		GFF4747	0.83	+0.4
4,748,005	-		GFF4747	0.85	+0.4
4,748,007	+		GFF4747	0.85	+0.1
4,748,007	+		GFF4747	0.85	+0.4
4,748,007	+		GFF4747	0.85	+0.1
4,748,010	-		GFF4747	0.86	-0.7
4,748,015	-		GFF4747	0.86	-2.6
4,748,020	-		GFF4747	0.87	-0.8
4,748,020	-		GFF4747	0.87	+1.8
4,748,126	+				-2.0
4,748,127	+				-0.3
4,748,127	+				-2.0
4,748,127	+				-0.7
4,748,134	-				+0.6
4,748,142	+				+0.2
4,748,255	+				+0.7
4,748,265	-				-0.0
4,748,266	+				-0.6
4,748,291	+				-1.2
4,748,291	+				+0.5
4,748,299	-				-2.2
4,748,299	-				-1.8
4,748,309	-				-0.8
4,748,356	-				+0.3
4,748,363	+				+0.3
4,748,371	-				-1.7
4,748,371	-				-0.9
4,748,371	-				+0.8
4,748,371	-				+0.1
4,748,375	-				-0.1
4,748,375	-				-1.8
4,748,382	+				+0.4
4,748,412	-				+0.3
4,748,424	+				-0.8
4,748,427	+				+0.5
4,748,432	-				+0.5
4,748,435	+				+0.3
4,748,569	-		GFF4748	0.18	-0.1
4,748,573	+		GFF4748	0.19	-0.9
4,748,583	+		GFF4748	0.20	+0.9
4,748,586	-		GFF4748	0.21	+0.4
4,748,613	+		GFF4748	0.25	+0.2
4,748,613	+		GFF4748	0.25	-0.3
4,748,641	+		GFF4748	0.29	+0.8
4,748,641	+		GFF4748	0.29	+0.7
4,748,641	+		GFF4748	0.29	-1.0
4,748,649	-		GFF4748	0.30	-0.7
4,748,669	+		GFF4748	0.33	-1.5
4,748,679	+		GFF4748	0.35	+0.3
4,748,687	-		GFF4748	0.36	+0.3
4,748,691	+		GFF4748	0.37	+0.6
4,748,699	-		GFF4748	0.38	-0.8
4,748,717	-		GFF4748	0.41	+0.1
4,748,720	+		GFF4748	0.41	+0.5
4,748,723	-		GFF4748	0.42	-1.5
4,748,738	-		GFF4748	0.44	+0.3
4,748,743	+		GFF4748	0.45	-0.1
4,748,743	+		GFF4748	0.45	-0.4
4,748,743	+		GFF4748	0.45	-0.6
4,748,743	+		GFF4748	0.45	+0.7
4,748,743	+		GFF4748	0.45	-1.6
4,748,743	+		GFF4748	0.45	-1.0
4,748,743	+		GFF4748	0.45	-1.7
4,748,743	+		GFF4748	0.45	-0.3
4,748,743	+		GFF4748	0.45	+0.6
4,748,743	+		GFF4748	0.45	+0.5
4,748,743	+		GFF4748	0.45	-0.8
4,748,743	+		GFF4748	0.45	-0.7
4,748,743	+		GFF4748	0.45	-0.5
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