Strain Fitness in Sphingobium sp. HT1-2 around GFF4607

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
4,601,395	-		GFF4606	0.40	+0.6
4,601,395	-		GFF4606	0.40	-2.6
4,601,395	-		GFF4606	0.40	-0.2
4,601,395	-		GFF4606	0.40	-0.9
4,601,411	+		GFF4606	0.41	-0.8
4,601,411	+		GFF4606	0.41	+0.7
4,601,416	+		GFF4606	0.41	-0.7
4,601,416	+		GFF4606	0.41	+2.1
4,601,416	+		GFF4606	0.41	+0.9
4,601,416	+		GFF4606	0.41	+0.4
4,601,419	-		GFF4606	0.41	-0.8
4,601,419	-		GFF4606	0.41	+1.2
4,601,422	+		GFF4606	0.42	-0.4
4,601,424	-		GFF4606	0.42	-1.0
4,601,424	-		GFF4606	0.42	-0.6
4,601,424	-		GFF4606	0.42	-0.2
4,601,432	+		GFF4606	0.42	-1.8
4,601,432	+		GFF4606	0.42	-0.1
4,601,467	-		GFF4606	0.45	-0.2
4,601,471	+		GFF4606	0.45	-0.6
4,601,471	+		GFF4606	0.45	+0.1
4,601,479	-		GFF4606	0.46	-0.9
4,601,479	-		GFF4606	0.46	+1.4
4,601,479	-		GFF4606	0.46	-1.5
4,601,479	-		GFF4606	0.46	-0.3
4,601,479	-		GFF4606	0.46	-0.8
4,601,479	-		GFF4606	0.46	+0.8
4,601,480	+		GFF4606	0.46	-1.2
4,601,490	+		GFF4606	0.46	-2.0
4,601,503	+		GFF4606	0.47	+0.2
4,601,503	+		GFF4606	0.47	-0.1
4,601,503	+		GFF4606	0.47	-0.5
4,601,503	+		GFF4606	0.47	-0.7
4,601,511	-		GFF4606	0.48	+0.1
4,601,511	-		GFF4606	0.48	+0.0
4,601,511	-		GFF4606	0.48	+0.5
4,601,511	-		GFF4606	0.48	+0.7
4,601,511	-		GFF4606	0.48	-1.7
4,601,512	+		GFF4606	0.48	-0.5
4,601,530	-		GFF4606	0.49	-0.9
4,601,535	-		GFF4606	0.50	-1.7
4,601,535	-		GFF4606	0.50	-0.9
4,601,572	+		GFF4606	0.52	+0.3
4,601,572	+		GFF4606	0.52	-1.5
4,601,572	-		GFF4606	0.52	-0.7
4,601,575	+		GFF4606	0.53	+0.9
4,601,575	+		GFF4606	0.53	-1.7
4,601,583	-		GFF4606	0.53	-0.4
4,601,593	+		GFF4606	0.54	-0.6
4,601,603	-		GFF4606	0.55	-0.3
4,601,603	-		GFF4606	0.55	-1.4
4,601,698	-		GFF4606	0.62	-2.3
4,601,698	-		GFF4606	0.62	-0.6
4,601,704	+		GFF4606	0.62	-0.5
4,601,739	+		GFF4606	0.65	-0.0
4,601,739	+		GFF4606	0.65	+0.2
4,601,746	+		GFF4606	0.65	-0.5
4,601,747	-		GFF4606	0.65	+1.0
4,601,747	-		GFF4606	0.65	-0.4
4,601,747	-		GFF4606	0.65	-1.7
4,601,747	-		GFF4606	0.65	-0.2
4,601,747	-		GFF4606	0.65	-1.3
4,601,794	-		GFF4606	0.69	+0.3
4,601,807	+		GFF4606	0.69	+0.1
4,601,817	-		GFF4606	0.70	-1.1
4,601,834	-		GFF4606	0.71	+0.4
4,601,842	-		GFF4606	0.72	-0.1
4,601,850	-		GFF4606	0.73	+0.4
4,601,864	-		GFF4606	0.74	-0.7
4,601,864	-		GFF4606	0.74	-0.1
4,601,866	-		GFF4606	0.74	-0.2
4,601,887	-		GFF4606	0.75	-0.9
4,601,922	-		GFF4606	0.78	+0.7
4,601,940	+		GFF4606	0.79	+1.6
4,601,940	+		GFF4606	0.79	-0.5
4,601,940	+		GFF4606	0.79	+0.1
4,601,948	-		GFF4606	0.80	-0.9
4,601,959	+		GFF4606	0.81	-1.0
4,601,959	+		GFF4606	0.81	-2.4
4,601,991	-		GFF4606	0.83	-0.7
4,601,991	-		GFF4606	0.83	-0.8
4,602,031	-		GFF4606	0.86	-0.0
4,602,032	-		GFF4606	0.86	+0.2
4,602,062	+		GFF4606	0.88	-0.0
4,602,089	-				-0.1
4,602,089	-				+0.0
4,602,101	+				+0.2
4,602,114	+				-1.4
4,602,115	-				+1.3
4,602,140	+				-0.5
4,602,141	+				-1.1
4,602,141	+				-2.0
4,602,147	-				-0.8
4,602,149	-				+0.7
4,602,157	+				-0.6
4,602,157	+				-1.7
4,602,165	-				-1.5
4,602,176	+				-0.3
4,602,179	-				-0.1
4,602,184	-				-1.9
4,602,185	-				-0.1
4,602,191	-				-0.1
4,602,232	+				+0.1
4,602,241	-				+0.1
4,602,242	+				-0.2
4,602,252	+				-1.0
4,602,266	+				-1.7
4,602,267	-				-1.0
4,602,267	-				-1.1
4,602,274	-				-0.4
4,602,274	-				-0.3
4,602,289	-				+1.0
4,602,326	+				-0.5
4,602,336	+				-0.1
4,602,352	-				-1.2
4,602,366	-				-0.5
4,602,390	+				-0.0
4,602,392	+				-0.8
4,602,392	+				-0.0
4,602,392	+				-1.2
4,602,392	+				+0.7
4,602,392	+				-2.6
4,602,398	-				+0.6
4,602,400	+				+0.7
4,602,400	+				+0.4
4,602,400	-				-0.8
4,602,400	-				+0.1
4,602,400	-				-2.0
4,602,405	+				-0.7
4,602,419	+				-0.6
4,602,434	+				-0.4
4,602,434	+				-0.5
4,602,439	+				-0.7
4,602,442	-				-0.8
4,602,442	-				-1.3
4,602,442	-				-1.8
4,602,442	-				-0.9
4,602,447	-				+0.5
4,602,447	-				-0.7
4,602,474	+				-1.9
4,602,474	+				-0.1
4,602,474	+				+0.1
4,602,482	+				-1.3
4,602,482	+				-0.8
4,602,482	-				-0.7
4,602,482	-				+0.7
4,602,482	-				+0.1
4,602,489	+				-2.8
4,602,490	-				-1.0
4,602,503	+				-0.0
4,602,511	-				-1.8
4,602,511	-				+0.3
4,602,511	-				+0.5
4,602,516	-				-1.9
4,602,549	+				-0.2
4,602,592	+		GFF4607	0.11	+0.8
4,602,601	-		GFF4607	0.11	-1.0
4,602,608	-		GFF4607	0.12	+0.8
4,602,610	+		GFF4607	0.12	-2.5
4,602,615	+		GFF4607	0.12	-0.5
4,602,620	+		GFF4607	0.12	-0.3
4,602,627	-		GFF4607	0.13	+0.4
4,602,628	-		GFF4607	0.13	-0.9
4,602,638	+		GFF4607	0.13	+0.5
4,602,638	-		GFF4607	0.13	-2.0
4,602,638	-		GFF4607	0.13	+0.5
4,602,639	-		GFF4607	0.13	+0.0
4,602,640	+		GFF4607	0.13	-1.6
4,602,646	-		GFF4607	0.14	+0.3
4,602,651	-		GFF4607	0.14	+1.0
4,602,651	-		GFF4607	0.14	+0.1
4,602,680	+		GFF4607	0.16	-0.8
4,602,686	+		GFF4607	0.16	-0.6
4,602,694	+		GFF4607	0.16	-1.0
4,602,696	+		GFF4607	0.17	-1.2
4,602,702	-		GFF4607	0.17	-2.0
4,602,705	+		GFF4607	0.17	-1.5
4,602,721	+		GFF4607	0.18	-1.1
4,602,721	+		GFF4607	0.18	+0.5
4,602,726	+		GFF4607	0.18	-1.6
4,602,726	+		GFF4607	0.18	+1.5
4,602,726	+		GFF4607	0.18	-0.9
4,602,726	+		GFF4607	0.18	-0.7
4,602,726	+		GFF4607	0.18	-0.5
4,602,726	+		GFF4607	0.18	-0.9
4,602,729	-		GFF4607	0.18	-2.1
4,602,729	-		GFF4607	0.18	+0.6
4,602,729	-		GFF4607	0.18	+0.0
4,602,734	-		GFF4607	0.19	+0.5
4,602,734	-		GFF4607	0.19	-1.6
4,602,734	-		GFF4607	0.19	-0.5
4,602,766	-		GFF4607	0.20	+1.0
4,602,774	+		GFF4607	0.21	-1.6
4,602,778	-		GFF4607	0.21	+0.4
4,602,780	-		GFF4607	0.21	-0.9
4,602,782	-		GFF4607	0.21	+0.5
4,602,782	-		GFF4607	0.21	-0.3
4,602,782	-		GFF4607	0.21	-1.5
4,602,791	+		GFF4607	0.22	+0.8
4,602,792	-		GFF4607	0.22	-1.1
4,602,804	-		GFF4607	0.22	+0.6
4,602,809	+		GFF4607	0.23	-1.1
4,602,817	-		GFF4607	0.23	-0.7
4,602,822	-		GFF4607	0.23	+1.2
4,602,822	-		GFF4607	0.23	+1.0
4,602,829	+		GFF4607	0.24	-0.8
4,602,876	+		GFF4607	0.26	-0.6
4,602,889	+		GFF4607	0.27	-1.6
4,602,897	-		GFF4607	0.27	-0.5
4,602,912	-		GFF4607	0.28	-1.7
4,602,917	-		GFF4607	0.29	-1.6
4,602,923	-		GFF4607	0.29	-0.9
4,602,939	-		GFF4607	0.30	-0.0
4,602,955	+		GFF4607	0.31	-2.1
4,602,955	+		GFF4607	0.31	-0.2
4,602,962	+		GFF4607	0.31	-0.2
4,602,962	+		GFF4607	0.31	-2.0
4,602,963	-		GFF4607	0.31	-0.5
4,602,967	+		GFF4607	0.31	-0.6
4,602,977	+		GFF4607	0.32	+1.0
4,602,977	+		GFF4607	0.32	-1.2
4,602,987	+		GFF4607	0.32	-0.3
4,602,992	+		GFF4607	0.33	-0.2
4,602,992	+		GFF4607	0.33	-2.2
4,602,995	-		GFF4607	0.33	+0.1
4,603,003	+		GFF4607	0.33	+0.4
4,603,011	-		GFF4607	0.34	-0.3
4,603,011	-		GFF4607	0.34	-1.0
4,603,011	-		GFF4607	0.34	-0.0
4,603,013	+		GFF4607	0.34	+0.3
4,603,027	+		GFF4607	0.35	-1.3
4,603,048	-		GFF4607	0.36	-1.1
4,603,058	+		GFF4607	0.36	-0.0
4,603,058	-		GFF4607	0.36	-1.7
4,603,073	+		GFF4607	0.37	-0.8
4,603,079	+		GFF4607	0.37	-1.0
4,603,079	+		GFF4607	0.37	-0.3
4,603,079	+		GFF4607	0.37	+0.4
4,603,080	-		GFF4607	0.37	-1.6
4,603,087	-		GFF4607	0.38	-0.4
4,603,087	-		GFF4607	0.38	-1.6
4,603,098	-		GFF4607	0.38	-2.9
4,603,120	+		GFF4607	0.40	-1.5
4,603,148	+		GFF4607	0.41	+0.5
4,603,149	+		GFF4607	0.41	+0.2
4,603,160	+		GFF4607	0.42	+0.2
4,603,160	+		GFF4607	0.42	+0.9
4,603,160	+		GFF4607	0.42	-0.2
4,603,160	+		GFF4607	0.42	-0.1
4,603,160	+		GFF4607	0.42	-2.1
4,603,160	+		GFF4607	0.42	-0.5
4,603,160	+		GFF4607	0.42	-1.0
4,603,160	+		GFF4607	0.42	-0.3
4,603,160	+		GFF4607	0.42	-0.2
4,603,160	+		GFF4607	0.42	-1.0
4,603,160	+		GFF4607	0.42	+0.5
4,603,160	+		GFF4607	0.42	-0.5
4,603,168	-		GFF4607	0.42	-0.2
4,603,168	-		GFF4607	0.42	-0.6
4,603,168	-		GFF4607	0.42	-0.7
4,603,168	-		GFF4607	0.42	-1.3
4,603,168	-		GFF4607	0.42	+0.1
4,603,168	-		GFF4607	0.42	+0.1
4,603,168	-		GFF4607	0.42	-0.3
4,603,168	-		GFF4607	0.42	-2.6
4,603,168	-		GFF4607	0.42	-0.7
4,603,168	-		GFF4607	0.42	-0.4
4,603,168	-		GFF4607	0.42	+0.9
4,603,168	-		GFF4607	0.42	-0.3
4,603,168	-		GFF4607	0.42	-0.2
4,603,168	-		GFF4607	0.42	-0.9
4,603,192	+		GFF4607	0.44	+0.6
4,603,195	-		GFF4607	0.44	+0.1
4,603,200	-		GFF4607	0.44	+0.3
4,603,200	-		GFF4607	0.44	-1.8
4,603,206	+		GFF4607	0.44	+0.0
4,603,207	-		GFF4607	0.44	-2.8
4,603,211	+		GFF4607	0.45	+0.7
4,603,218	+		GFF4607	0.45	+0.8
4,603,219	-		GFF4607	0.45	-0.5
4,603,227	-		GFF4607	0.46	-0.8
4,603,229	+		GFF4607	0.46	-0.9
4,603,249	+		GFF4607	0.47	-0.8
4,603,249	+		GFF4607	0.47	+0.2
4,603,254	+		GFF4607	0.47	-0.4
4,603,254	+		GFF4607	0.47	+0.1
4,603,257	-		GFF4607	0.47	+0.9
4,603,257	-		GFF4607	0.47	-1.1
4,603,257	-		GFF4607	0.47	-0.4
4,603,257	-		GFF4607	0.47	-2.0
4,603,267	-		GFF4607	0.48	-2.3
4,603,277	-		GFF4607	0.48	+0.5
4,603,277	-		GFF4607	0.48	-0.7
4,603,328	+		GFF4607	0.51	+0.5
4,603,335	-		GFF4607	0.51	-0.9
4,603,338	+		GFF4607	0.52	-0.7
4,603,341	+		GFF4607	0.52	+0.1
4,603,342	+		GFF4607	0.52	+0.9
4,603,364	+		GFF4607	0.53	-1.8
4,603,401	+		GFF4607	0.55	-2.0
4,603,401	+		GFF4607	0.55	-0.1
4,603,401	+		GFF4607	0.55	+0.6
4,603,401	+		GFF4607	0.55	-0.1
4,603,406	+		GFF4607	0.55	-1.5
4,603,406	+		GFF4607	0.55	+0.5
4,603,406	+		GFF4607	0.55	-0.1
4,603,406	+		GFF4607	0.55	-2.3
4,603,406	+		GFF4607	0.55	+0.2
4,603,406	+		GFF4607	0.55	-0.4
4,603,406	+		GFF4607	0.55	-0.5
4,603,406	+		GFF4607	0.55	-0.2
4,603,406	+		GFF4607	0.55	-0.3
4,603,406	+		GFF4607	0.55	-2.2
4,603,406	+		GFF4607	0.55	-0.6
4,603,406	+		GFF4607	0.55	-0.5
4,603,406	+		GFF4607	0.55	-1.0
4,603,406	+		GFF4607	0.55	-1.8
4,603,406	+		GFF4607	0.55	+0.0
4,603,406	+		GFF4607	0.55	+0.2
4,603,406	+		GFF4607	0.55	-0.7
4,603,406	+		GFF4607	0.55	-1.9
4,603,409	-		GFF4607	0.55	+0.9
4,603,409	-		GFF4607	0.55	-2.6
4,603,409	-		GFF4607	0.55	+0.8
4,603,411	-		GFF4607	0.56	-0.1
4,603,414	-		GFF4607	0.56	-0.7
4,603,414	-		GFF4607	0.56	+0.1
4,603,414	-		GFF4607	0.56	-0.5
4,603,414	-		GFF4607	0.56	+0.5
4,603,414	-		GFF4607	0.56	-0.5
4,603,414	-		GFF4607	0.56	-2.0
4,603,414	-		GFF4607	0.56	-0.9
4,603,414	-		GFF4607	0.56	-0.5
4,603,414	-		GFF4607	0.56	-1.6
4,603,414	-		GFF4607	0.56	-0.7
4,603,414	-		GFF4607	0.56	-0.3
4,603,414	-		GFF4607	0.56	-0.2
4,603,414	-		GFF4607	0.56	-1.3
4,603,414	-		GFF4607	0.56	-2.4
4,603,414	-		GFF4607	0.56	-0.0
4,603,414	-		GFF4607	0.56	-1.5
4,603,414	-		GFF4607	0.56	-1.1
4,603,414	-		GFF4607	0.56	-0.9
4,603,414	-		GFF4607	0.56	-0.2
4,603,414	-		GFF4607	0.56	-0.9
4,603,416	+		GFF4607	0.56	-2.1
4,603,416	+		GFF4607	0.56	-1.3
4,603,424	-		GFF4607	0.56	-1.9
4,603,424	-		GFF4607	0.56	-2.1
4,603,433	+		GFF4607	0.57	+0.1
4,603,433	+		GFF4607	0.57	-1.3
4,603,441	-		GFF4607	0.57	-0.8
4,603,445	+		GFF4607	0.57	-1.4
4,603,474	-		GFF4607	0.59	+0.5
4,603,474	-		GFF4607	0.59	-1.0
4,603,497	+		GFF4607	0.60	-1.5
4,603,529	+		GFF4607	0.62	+0.3
4,603,537	-		GFF4607	0.62	-0.1
4,603,537	-		GFF4607	0.62	+0.2
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4,604,070	+				+0.7
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4,604,177	-				-1.3
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4,604,218	+				-0.9
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4,604,218	+				-0.5
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