Strain Fitness in Sphingobium sp. HT1-2 around GFF4591

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
4,583,245	+				+0.1
4,583,247	-				+0.1
4,583,286	+				+0.1
4,583,286	+				-0.8
4,583,286	+				+0.3
4,583,294	-				+0.3
4,583,294	-				-1.3
4,583,300	+				-0.1
4,583,301	+				-0.7
4,583,309	-				+0.3
4,583,310	-				+1.1
4,583,317	-				-0.5
4,583,357	+		GFF4590	0.13	-2.1
4,583,394	-		GFF4590	0.17	+0.4
4,583,401	+		GFF4590	0.18	-0.2
4,583,401	+		GFF4590	0.18	-1.5
4,583,401	+		GFF4590	0.18	+0.3
4,583,418	+		GFF4590	0.20	+0.1
4,583,418	+		GFF4590	0.20	-0.3
4,583,426	-		GFF4590	0.21	-1.4
4,583,426	-		GFF4590	0.21	+1.0
4,583,433	+		GFF4590	0.21	+0.8
4,583,433	+		GFF4590	0.21	-0.0
4,583,433	+		GFF4590	0.21	+1.4
4,583,433	+		GFF4590	0.21	+0.1
4,583,433	+		GFF4590	0.21	-1.6
4,583,441	-		GFF4590	0.22	-0.3
4,583,453	+		GFF4590	0.24	-0.8
4,583,465	-		GFF4590	0.25	+0.9
4,583,476	+		GFF4590	0.26	-1.7
4,583,488	+		GFF4590	0.28	-1.2
4,583,490	-		GFF4590	0.28	-0.7
4,583,509	+		GFF4590	0.30	-0.3
4,583,510	+		GFF4590	0.30	-0.4
4,583,510	+		GFF4590	0.30	-0.8
4,583,510	+		GFF4590	0.30	-2.0
4,583,510	+		GFF4590	0.30	-1.5
4,583,518	-		GFF4590	0.31	+1.4
4,583,566	+		GFF4590	0.37	-0.6
4,583,569	+		GFF4590	0.37	+0.1
4,583,571	+		GFF4590	0.38	-0.1
4,583,571	+		GFF4590	0.38	-0.3
4,583,574	-		GFF4590	0.38	+0.0
4,583,574	-		GFF4590	0.38	+0.6
4,583,608	+		GFF4590	0.42	+0.1
4,583,608	+		GFF4590	0.42	+0.1
4,583,609	-		GFF4590	0.42	-1.8
4,583,609	-		GFF4590	0.42	+0.9
4,583,611	+		GFF4590	0.42	+0.1
4,583,611	+		GFF4590	0.42	-0.8
4,583,611	+		GFF4590	0.42	-0.7
4,583,611	+		GFF4590	0.42	-0.5
4,583,613	+		GFF4590	0.42	-0.2
4,583,619	-		GFF4590	0.43	-0.6
4,583,619	-		GFF4590	0.43	-0.3
4,583,619	-		GFF4590	0.43	-0.1
4,583,621	-		GFF4590	0.43	-2.2
4,583,621	-		GFF4590	0.43	-0.5
4,583,621	-		GFF4590	0.43	-0.7
4,583,621	-		GFF4590	0.43	+0.5
4,583,629	-		GFF4590	0.44	-2.3
4,583,644	+		GFF4590	0.46	+0.1
4,583,690	+		GFF4590	0.51	-0.6
4,583,698	-		GFF4590	0.52	-0.2
4,583,707	+		GFF4590	0.53	-0.9
4,583,707	+		GFF4590	0.53	+0.2
4,583,709	+		GFF4590	0.54	+0.7
4,583,709	+		GFF4590	0.54	-0.6
4,583,709	+		GFF4590	0.54	+0.0
4,583,709	+		GFF4590	0.54	-0.7
4,583,712	+		GFF4590	0.54	-0.6
4,583,712	+		GFF4590	0.54	+0.6
4,583,712	+		GFF4590	0.54	+0.7
4,583,714	+		GFF4590	0.54	-0.3
4,583,715	-		GFF4590	0.54	-0.5
4,583,715	-		GFF4590	0.54	-2.6
4,583,715	-		GFF4590	0.54	+0.1
4,583,715	-		GFF4590	0.54	+0.1
4,583,715	-		GFF4590	0.54	-0.6
4,583,720	-		GFF4590	0.55	-1.5
4,583,720	-		GFF4590	0.55	-1.1
4,583,720	-		GFF4590	0.55	-0.2
4,583,720	-		GFF4590	0.55	-0.8
4,583,720	-		GFF4590	0.55	-1.8
4,583,720	-		GFF4590	0.55	+0.5
4,583,720	-		GFF4590	0.55	+0.8
4,583,720	-		GFF4590	0.55	+0.5
4,583,720	-		GFF4590	0.55	+1.5
4,583,730	-		GFF4590	0.56	+0.5
4,583,756	+		GFF4590	0.59	-0.1
4,583,764	-		GFF4590	0.60	+0.3
4,583,788	-		GFF4590	0.63	+0.7
4,583,788	-		GFF4590	0.63	-1.2
4,583,788	-		GFF4590	0.63	-0.4
4,583,813	+		GFF4590	0.66	+1.1
4,583,821	-		GFF4590	0.67	-0.8
4,583,821	-		GFF4590	0.67	-0.7
4,583,857	+		GFF4590	0.71	+0.1
4,583,857	+		GFF4590	0.71	-1.3
4,583,858	-		GFF4590	0.71	-0.7
4,583,876	+		GFF4590	0.73	-0.1
4,583,879	-		GFF4590	0.73	-0.9
4,583,884	-		GFF4590	0.74	+0.2
4,583,895	-		GFF4590	0.75	-1.7
4,583,905	+		GFF4590	0.76	-0.9
4,583,914	-		GFF4590	0.77	+0.5
4,583,914	-		GFF4590	0.77	-1.0
4,583,936	+		GFF4590	0.80	+0.0
4,583,946	+		GFF4590	0.81	+0.3
4,583,946	+		GFF4590	0.81	+0.1
4,583,975	+		GFF4590	0.84	-0.5
4,583,983	-		GFF4590	0.85	+0.4
4,583,986	+		GFF4590	0.86	+0.1
4,583,989	-		GFF4590	0.86	+1.2
4,583,989	-		GFF4590	0.86	+0.3
4,583,991	+		GFF4590	0.86	-0.2
4,583,991	+		GFF4590	0.86	-0.4
4,583,991	+		GFF4590	0.86	+0.3
4,583,997	+		GFF4590	0.87	+0.5
4,583,997	-		GFF4590	0.87	-0.8
4,584,016	-		GFF4590	0.89	-0.8
4,584,051	+				-0.9
4,584,150	+				-2.5
4,584,151	+				+0.2
4,584,159	-				-0.2
4,584,175	-				-0.4
4,584,181	-				-0.7
4,584,217	+				-1.0
4,584,222	+				-0.5
4,584,222	+				+0.6
4,584,222	+				+0.7
4,584,222	+				+0.3
4,584,222	+				-0.2
4,584,222	+				-1.5
4,584,222	+				-0.5
4,584,225	-				-1.0
4,584,230	-				-0.2
4,584,230	-				-0.5
4,584,230	-				-0.5
4,584,230	-				+0.1
4,584,244	+				+0.9
4,584,254	+				-0.3
4,584,254	+				-0.4
4,584,254	+				-1.9
4,584,256	+				-1.9
4,584,262	-				+0.1
4,584,262	-				-1.6
4,584,262	-				-1.0
4,584,264	-				-0.0
4,584,264	-				-2.3
4,584,264	-				-0.7
4,584,264	-				-0.3
4,584,264	-				+0.5
4,584,264	-				+0.5
4,584,282	+				-0.5
4,584,285	-				-0.4
4,584,292	-				+1.5
4,584,301	+				-0.5
4,584,309	-				-0.3
4,584,368	+		GFF4591	0.13	+0.3
4,584,368	+		GFF4591	0.13	-0.5
4,584,368	+		GFF4591	0.13	-1.2
4,584,368	+		GFF4591	0.13	-0.6
4,584,368	+		GFF4591	0.13	-1.1
4,584,368	+		GFF4591	0.13	-1.8
4,584,368	+		GFF4591	0.13	-0.4
4,584,368	+		GFF4591	0.13	-0.1
4,584,376	-		GFF4591	0.14	-1.0
4,584,376	-		GFF4591	0.14	+1.0
4,584,376	-		GFF4591	0.14	-0.8
4,584,376	-		GFF4591	0.14	+0.2
4,584,376	-		GFF4591	0.14	+0.7
4,584,376	-		GFF4591	0.14	+0.8
4,584,376	-		GFF4591	0.14	+0.1
4,584,376	-		GFF4591	0.14	-0.8
4,584,376	-		GFF4591	0.14	-0.5
4,584,376	-		GFF4591	0.14	-1.6
4,584,376	-		GFF4591	0.14	+0.6
4,584,376	-		GFF4591	0.14	-1.0
4,584,376	-		GFF4591	0.14	+0.5
4,584,376	-		GFF4591	0.14	-0.5
4,584,386	-		GFF4591	0.15	-0.3
4,584,392	-		GFF4591	0.16	-0.0
4,584,408	+		GFF4591	0.17	+0.3
4,584,421	-		GFF4591	0.19	+0.0
4,584,476	+		GFF4591	0.25	-0.3
4,584,476	+		GFF4591	0.25	-0.1
4,584,484	-		GFF4591	0.25	-1.7
4,584,484	-		GFF4591	0.25	+0.5
4,584,495	+		GFF4591	0.26	-0.6
4,584,501	-		GFF4591	0.27	-0.3
4,584,503	+		GFF4591	0.27	-2.6
4,584,503	+		GFF4591	0.27	-0.0
4,584,503	+		GFF4591	0.27	+0.2
4,584,503	+		GFF4591	0.27	-0.0
4,584,503	-		GFF4591	0.27	+0.5
4,584,503	-		GFF4591	0.27	+0.3
4,584,504	+		GFF4591	0.27	+0.3
4,584,511	+		GFF4591	0.28	-0.7
4,584,511	-		GFF4591	0.28	-0.2
4,584,511	-		GFF4591	0.28	+1.1
4,584,511	-		GFF4591	0.28	-0.3
4,584,511	-		GFF4591	0.28	+0.3
4,584,511	-		GFF4591	0.28	+0.4
4,584,511	-		GFF4591	0.28	-0.5
4,584,511	-		GFF4591	0.28	+0.3
4,584,511	-		GFF4591	0.28	-1.3
4,584,512	+		GFF4591	0.28	+0.1
4,584,512	+		GFF4591	0.28	-0.9
4,584,512	+		GFF4591	0.28	-1.5
4,584,512	+		GFF4591	0.28	-1.6
4,584,512	+		GFF4591	0.28	-0.4
4,584,512	-		GFF4591	0.28	-0.1
4,584,512	-		GFF4591	0.28	+0.7
4,584,517	+		GFF4591	0.29	-0.0
4,584,518	+		GFF4591	0.29	-1.5
4,584,520	-		GFF4591	0.29	-1.9
4,584,520	-		GFF4591	0.29	-0.6
4,584,525	-		GFF4591	0.30	-0.1
4,584,539	+		GFF4591	0.31	-1.0
4,584,542	-		GFF4591	0.31	+0.3
4,584,545	+		GFF4591	0.32	-0.9
4,584,553	-		GFF4591	0.33	-0.0
4,584,555	+		GFF4591	0.33	-0.9
4,584,572	+		GFF4591	0.35	+0.5
4,584,591	+		GFF4591	0.37	+0.5
4,584,591	+		GFF4591	0.37	+0.0
4,584,591	+		GFF4591	0.37	-1.0
4,584,591	+		GFF4591	0.37	+0.1
4,584,599	-		GFF4591	0.37	-0.5
4,584,599	-		GFF4591	0.37	+0.1
4,584,601	+		GFF4591	0.38	+0.9
4,584,610	+		GFF4591	0.39	-0.7
4,584,614	-		GFF4591	0.39	-0.6
4,584,634	-		GFF4591	0.41	+0.6
4,584,652	-		GFF4591	0.43	-1.2
4,584,656	+		GFF4591	0.43	+0.0
4,584,657	-		GFF4591	0.44	+0.1
4,584,661	+		GFF4591	0.44	-0.5
4,584,718	+		GFF4591	0.50	+0.4
4,584,718	-		GFF4591	0.50	-1.2
4,584,726	+		GFF4591	0.51	-1.5
4,584,734	-		GFF4591	0.52	+0.4
4,584,734	-		GFF4591	0.52	-1.1
4,584,734	-		GFF4591	0.52	-0.9
4,584,746	-		GFF4591	0.53	-0.5
4,584,753	-		GFF4591	0.54	-1.8
4,584,766	+		GFF4591	0.55	-0.0
4,584,775	+		GFF4591	0.56	-1.6
4,584,778	+		GFF4591	0.56	-1.6
4,584,780	+		GFF4591	0.56	-1.0
4,584,780	+		GFF4591	0.56	+0.3
4,584,780	+		GFF4591	0.56	+0.3
4,584,787	+		GFF4591	0.57	-0.7
4,584,787	+		GFF4591	0.57	+0.2
4,584,787	+		GFF4591	0.57	-1.3
4,584,788	-		GFF4591	0.57	-1.2
4,584,788	-		GFF4591	0.57	+0.8
4,584,797	+		GFF4591	0.58	-1.5
4,584,800	-		GFF4591	0.59	+0.9
4,584,805	-		GFF4591	0.59	-0.2
4,584,812	+		GFF4591	0.60	-1.9
4,584,812	+		GFF4591	0.60	-0.2
4,584,823	+		GFF4591	0.61	+0.1
4,584,850	+		GFF4591	0.64	-1.9
4,584,860	+		GFF4591	0.65	+0.7
4,584,861	+		GFF4591	0.65	+1.4
4,584,861	+		GFF4591	0.65	-0.7
4,584,869	-		GFF4591	0.66	-2.1
4,584,876	+		GFF4591	0.67	-1.4
4,584,879	+		GFF4591	0.67	-0.2
4,584,884	-		GFF4591	0.67	-1.5
4,584,884	-		GFF4591	0.67	-2.6
4,584,912	-		GFF4591	0.70	+0.1
4,584,915	+		GFF4591	0.71	+0.2
4,584,920	+		GFF4591	0.71	+0.7
4,584,920	+		GFF4591	0.71	+1.0
4,584,923	-		GFF4591	0.72	-0.8
4,584,928	-		GFF4591	0.72	+0.0
4,584,928	-		GFF4591	0.72	-2.4
4,584,940	-		GFF4591	0.73	-0.3
4,584,941	+		GFF4591	0.73	-1.6
4,584,941	+		GFF4591	0.73	-0.7
4,584,941	+		GFF4591	0.73	+0.2
4,584,941	+		GFF4591	0.73	+0.8
4,584,941	+		GFF4591	0.73	+0.8
4,584,941	+		GFF4591	0.73	+1.2
4,584,941	+		GFF4591	0.73	+0.0
4,584,941	+		GFF4591	0.73	-1.0
4,584,941	+		GFF4591	0.73	+0.1
4,584,941	+		GFF4591	0.73	-0.0
4,584,941	+		GFF4591	0.73	-1.6
4,584,941	+		GFF4591	0.73	-0.6
4,584,943	+		GFF4591	0.74	-1.3
4,584,949	-		GFF4591	0.74	-3.2
4,584,949	-		GFF4591	0.74	-0.3
4,584,949	-		GFF4591	0.74	+0.5
4,584,949	-		GFF4591	0.74	-0.0
4,584,949	-		GFF4591	0.74	+1.2
4,584,949	-		GFF4591	0.74	+1.4
4,584,949	-		GFF4591	0.74	-0.8
4,584,949	-		GFF4591	0.74	-1.3
4,584,949	-		GFF4591	0.74	-0.7
4,584,949	-		GFF4591	0.74	-0.6
4,584,954	-		GFF4591	0.75	-0.6
4,584,959	-		GFF4591	0.75	-0.0
4,584,966	+		GFF4591	0.76	-0.2
4,584,974	-		GFF4591	0.77	-0.5
4,584,982	-		GFF4591	0.78	-0.2
4,585,020	+		GFF4591	0.82	+0.9
4,585,028	-		GFF4591	0.83	+0.1
4,585,030	+		GFF4591	0.83	-1.7
4,585,033	-		GFF4591	0.83	-0.9
4,585,033	-		GFF4591	0.83	-0.3
4,585,048	+		GFF4591	0.85	-1.0
4,585,058	-		GFF4591	0.86	+0.6
4,585,066	+		GFF4591	0.87	-0.7
4,585,074	-		GFF4591	0.87	-1.1
4,585,081	+		GFF4591	0.88	-2.2
4,585,081	+		GFF4591	0.88	-0.3
4,585,084	+		GFF4591	0.88	-0.6
4,585,084	-		GFF4591	0.88	-0.2
4,585,086	+		GFF4591	0.89	-0.2
4,585,086	+		GFF4591	0.89	+0.3
4,585,094	-		GFF4591	0.89	+0.0
4,585,094	-		GFF4591	0.89	-1.7
4,585,102	+				-0.6
4,585,108	+				-0.8
4,585,129	+				-0.3
4,585,136	+				-1.0
4,585,140	+				-1.1
4,585,141	+				-1.0
4,585,149	-				-0.4
4,585,164	+				-0.1
4,585,164	+				+0.9
4,585,164	+				-2.6
4,585,164	+				+0.4
4,585,167	+				-1.7
4,585,169	+				+0.4
4,585,169	+				-1.2
4,585,169	+				-1.1
4,585,169	+				-1.9
4,585,172	-				-2.0
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