Strain Fitness in Sphingobium sp. HT1-2 around GFF4199

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
4,221,793	-		GFF4198	0.33	-0.7
4,221,793	-		GFF4198	0.33	-0.6
4,221,793	-		GFF4198	0.33	-1.4
4,221,800	+		GFF4198	0.33	-1.1
4,221,800	+		GFF4198	0.33	-0.2
4,221,800	+		GFF4198	0.33	-0.5
4,221,800	+		GFF4198	0.33	+1.0
4,221,822	-		GFF4198	0.35	-1.5
4,221,824	+		GFF4198	0.35	+0.3
4,221,824	+		GFF4198	0.35	+0.2
4,221,834	+		GFF4198	0.35	+0.4
4,221,839	+		GFF4198	0.36	+0.0
4,221,842	-		GFF4198	0.36	+0.3
4,221,854	+		GFF4198	0.37	+0.0
4,221,863	-		GFF4198	0.38	-0.5
4,221,887	-		GFF4198	0.39	-0.7
4,221,887	-		GFF4198	0.39	-1.0
4,221,892	+		GFF4198	0.40	-0.0
4,221,893	-		GFF4198	0.40	-0.5
4,221,895	-		GFF4198	0.40	-1.7
4,221,895	-		GFF4198	0.40	+0.9
4,221,900	-		GFF4198	0.40	-0.3
4,221,900	-		GFF4198	0.40	-0.3
4,221,905	-		GFF4198	0.40	-0.4
4,221,955	+		GFF4198	0.44	+0.4
4,221,955	+		GFF4198	0.44	-0.2
4,221,957	+		GFF4198	0.44	+1.0
4,221,962	+		GFF4198	0.45	-0.1
4,221,962	+		GFF4198	0.45	-2.0
4,221,963	-		GFF4198	0.45	-0.4
4,221,963	-		GFF4198	0.45	-0.8
4,221,969	+		GFF4198	0.45	+0.3
4,221,969	+		GFF4198	0.45	-2.1
4,221,969	+		GFF4198	0.45	-0.7
4,221,969	+		GFF4198	0.45	+1.6
4,221,969	+		GFF4198	0.45	+0.3
4,221,970	-		GFF4198	0.45	-1.3
4,221,970	-		GFF4198	0.45	-0.9
4,221,970	-		GFF4198	0.45	-0.8
4,221,970	-		GFF4198	0.45	-1.6
4,221,970	-		GFF4198	0.45	+0.9
4,221,972	-		GFF4198	0.45	-2.8
4,221,977	-		GFF4198	0.46	-1.4
4,221,994	+		GFF4198	0.47	-0.9
4,222,002	-		GFF4198	0.47	-1.4
4,222,004	+		GFF4198	0.48	+0.3
4,222,016	-		GFF4198	0.48	+1.2
4,222,018	-		GFF4198	0.49	-2.0
4,222,022	+		GFF4198	0.49	-0.3
4,222,035	-		GFF4198	0.50	-1.7
4,222,072	+		GFF4198	0.52	-0.3
4,222,080	-		GFF4198	0.53	-0.2
4,222,111	-		GFF4198	0.55	-0.3
4,222,116	-		GFF4198	0.55	+1.1
4,222,116	-		GFF4198	0.55	+1.4
4,222,116	-		GFF4198	0.55	+0.3
4,222,134	+		GFF4198	0.57	+0.5
4,222,134	-		GFF4198	0.57	+0.9
4,222,166	+		GFF4198	0.59	-0.7
4,222,182	-		GFF4198	0.60	-0.4
4,222,187	-		GFF4198	0.60	+0.2
4,222,206	+		GFF4198	0.62	+0.2
4,222,216	+		GFF4198	0.63	-0.3
4,222,259	+		GFF4198	0.66	-1.5
4,222,267	-		GFF4198	0.66	-0.4
4,222,267	-		GFF4198	0.66	-1.2
4,222,267	-		GFF4198	0.66	+0.3
4,222,267	-		GFF4198	0.66	-2.0
4,222,267	-		GFF4198	0.66	-1.0
4,222,267	-		GFF4198	0.66	-2.0
4,222,268	+		GFF4198	0.66	+0.1
4,222,287	+		GFF4198	0.68	+0.1
4,222,295	-		GFF4198	0.68	-2.9
4,222,295	-		GFF4198	0.68	-0.2
4,222,303	+		GFF4198	0.69	+0.3
4,222,325	+		GFF4198	0.70	-0.2
4,222,325	+		GFF4198	0.70	-0.1
4,222,325	+		GFF4198	0.70	-1.3
4,222,325	+		GFF4198	0.70	+0.2
4,222,325	+		GFF4198	0.70	-0.5
4,222,325	+		GFF4198	0.70	+0.6
4,222,325	+		GFF4198	0.70	+0.4
4,222,333	-		GFF4198	0.71	+0.8
4,222,333	-		GFF4198	0.71	-0.1
4,222,333	-		GFF4198	0.71	-1.8
4,222,333	-		GFF4198	0.71	-0.5
4,222,333	-		GFF4198	0.71	-2.0
4,222,333	-		GFF4198	0.71	-2.1
4,222,343	-		GFF4198	0.72	-1.6
4,222,351	+		GFF4198	0.72	-0.1
4,222,351	+		GFF4198	0.72	-0.2
4,222,358	+		GFF4198	0.73	-1.9
4,222,359	-		GFF4198	0.73	-0.7
4,222,367	+		GFF4198	0.73	-2.6
4,222,370	-		GFF4198	0.73	+0.2
4,222,372	+		GFF4198	0.74	-0.6
4,222,375	-		GFF4198	0.74	-0.5
4,222,377	+		GFF4198	0.74	-0.5
4,222,389	-		GFF4198	0.75	-0.8
4,222,392	+		GFF4198	0.75	-0.0
4,222,392	+		GFF4198	0.75	-0.5
4,222,392	+		GFF4198	0.75	-2.7
4,222,392	+		GFF4198	0.75	-1.4
4,222,400	-		GFF4198	0.76	+0.5
4,222,400	-		GFF4198	0.76	+0.8
4,222,400	-		GFF4198	0.76	-0.2
4,222,405	+		GFF4198	0.76	-0.0
4,222,413	-		GFF4198	0.77	-0.0
4,222,418	+		GFF4198	0.77	-0.7
4,222,418	+		GFF4198	0.77	+0.6
4,222,418	+		GFF4198	0.77	-0.7
4,222,418	+		GFF4198	0.77	+0.0
4,222,418	+		GFF4198	0.77	-0.5
4,222,418	+		GFF4198	0.77	-0.8
4,222,418	+		GFF4198	0.77	-0.7
4,222,418	+		GFF4198	0.77	+1.1
4,222,423	+		GFF4198	0.77	-0.1
4,222,426	-		GFF4198	0.77	-1.4
4,222,426	-		GFF4198	0.77	+0.0
4,222,426	-		GFF4198	0.77	+0.8
4,222,452	+		GFF4198	0.79	-0.5
4,222,465	+		GFF4198	0.80	-0.7
4,222,467	+		GFF4198	0.80	-1.3
4,222,467	+		GFF4198	0.80	+0.2
4,222,467	+		GFF4198	0.80	+0.5
4,222,472	+		GFF4198	0.81	+0.1
4,222,472	+		GFF4198	0.81	-0.4
4,222,480	-		GFF4198	0.81	-0.3
4,222,480	-		GFF4198	0.81	+0.9
4,222,480	-		GFF4198	0.81	-0.1
4,222,490	-		GFF4198	0.82	-2.5
4,222,508	-		GFF4198	0.83	-0.5
4,222,510	+		GFF4198	0.83	+0.3
4,222,510	+		GFF4198	0.83	-0.5
4,222,517	+		GFF4198	0.84	-1.7
4,222,524	+		GFF4198	0.84	-0.9
4,222,524	+		GFF4198	0.84	-0.3
4,222,532	-		GFF4198	0.85	-0.1
4,222,532	-		GFF4198	0.85	-0.1
4,222,548	+		GFF4198	0.86	-0.7
4,222,548	+		GFF4198	0.86	-0.0
4,222,559	+		GFF4198	0.87	-0.4
4,222,581	+		GFF4198	0.88	-1.2
4,222,581	+		GFF4198	0.88	+0.1
4,222,581	+		GFF4198	0.88	-1.5
4,222,589	-		GFF4198	0.89	-1.2
4,222,589	-		GFF4198	0.89	+0.2
4,222,589	-		GFF4198	0.89	+1.1
4,222,594	-		GFF4198	0.89	-0.8
4,222,612	+				+0.5
4,222,612	+				-1.9
4,222,620	-				-0.0
4,222,620	-				-0.4
4,222,629	+				+0.3
4,222,659	+				-1.4
4,222,667	-				-0.5
4,222,667	-				-0.6
4,222,690	+				-0.4
4,222,703	+				+1.0
4,222,703	+				-0.3
4,222,728	+				+0.5
4,222,728	+				-2.4
4,222,728	+				+0.6
4,222,728	+				-2.0
4,222,728	+				+0.1
4,222,728	+				-0.2
4,222,728	+				-0.0
4,222,728	+				-0.1
4,222,736	-				-0.0
4,222,736	-				-1.8
4,222,736	-				-0.6
4,222,736	-				-2.4
4,222,736	-				-0.8
4,222,736	-				-0.1
4,222,736	-				+0.3
4,222,736	-				-1.2
4,222,736	-				-1.2
4,222,797	+				-0.7
4,222,809	+				+0.8
4,222,809	+				-1.1
4,222,809	+				+0.0
4,222,817	-				-0.3
4,222,817	-				-1.0
4,222,817	-				+0.4
4,222,817	-				+1.1
4,222,817	-				-1.8
4,222,819	+				+0.6
4,222,854	+				-1.2
4,222,864	-				+2.0
4,222,888	+				-0.8
4,222,888	+				-0.0
4,222,893	+				-0.8
4,222,893	+				+0.1
4,222,893	+				-0.1
4,222,893	+				+0.2
4,222,893	+				-0.5
4,222,893	+				-0.4
4,222,893	+				-0.1
4,222,893	+				+0.5
4,222,893	+				+0.3
4,222,893	+				+0.2
4,222,893	+				-0.2
4,222,896	-				+0.3
4,222,896	-				-1.0
4,222,896	-				-1.2
4,222,898	+				-0.1
4,222,898	+				+1.1
4,222,901	-				-0.7
4,222,901	-				-1.8
4,222,901	-				+0.2
4,222,901	-				-1.7
4,222,901	-				+0.5
4,222,901	-				+0.0
4,222,901	-				+1.0
4,222,901	-				+1.1
4,222,901	-				-1.1
4,222,903	+				-0.6
4,222,906	-				-1.3
4,222,906	-				-0.2
4,222,906	-				-0.3
4,222,906	-				-0.5
4,222,906	-				+1.0
4,222,920	+				-1.5
4,222,920	+				+0.2
4,222,926	+				-0.8
4,222,926	+				-2.3
4,222,941	+				+0.4
4,222,945	+		GFF4199	0.10	-0.3
4,222,945	+		GFF4199	0.10	+0.9
4,222,949	-		GFF4199	0.10	-0.2
4,222,953	-		GFF4199	0.11	-2.0
4,222,953	-		GFF4199	0.11	-0.8
4,222,957	+		GFF4199	0.11	-0.1
4,222,962	+		GFF4199	0.11	-1.1
4,222,962	+		GFF4199	0.11	-0.7
4,222,962	+		GFF4199	0.11	-1.0
4,222,970	-		GFF4199	0.12	-0.0
4,222,970	-		GFF4199	0.12	+0.6
4,222,970	-		GFF4199	0.12	+0.6
4,222,972	+		GFF4199	0.12	-1.6
4,222,972	+		GFF4199	0.12	+1.2
4,222,978	-		GFF4199	0.12	-0.6
4,223,007	+		GFF4199	0.14	-1.0
4,223,013	-		GFF4199	0.15	-0.1
4,223,022	+		GFF4199	0.15	-1.8
4,223,057	+		GFF4199	0.17	-0.5
4,223,064	+		GFF4199	0.18	+0.2
4,223,064	+		GFF4199	0.18	-1.5
4,223,064	-		GFF4199	0.18	+0.3
4,223,065	-		GFF4199	0.18	-1.7
4,223,071	+		GFF4199	0.18	+0.9
4,223,071	+		GFF4199	0.18	-2.6
4,223,071	+		GFF4199	0.18	+0.6
4,223,072	-		GFF4199	0.18	-1.0
4,223,077	-		GFF4199	0.19	-1.6
4,223,087	-		GFF4199	0.19	-0.2
4,223,101	-		GFF4199	0.20	+0.3
4,223,115	+		GFF4199	0.21	-0.6
4,223,115	-		GFF4199	0.21	-1.5
4,223,134	+		GFF4199	0.22	-0.6
4,223,136	+		GFF4199	0.23	-1.5
4,223,142	-		GFF4199	0.23	+0.2
4,223,142	-		GFF4199	0.23	+0.2
4,223,151	-		GFF4199	0.24	+1.7
4,223,169	+		GFF4199	0.25	-0.4
4,223,176	-		GFF4199	0.25	-1.8
4,223,209	-		GFF4199	0.27	+0.3
4,223,217	-		GFF4199	0.28	-0.5
4,223,225	+		GFF4199	0.28	-0.1
4,223,238	-		GFF4199	0.29	-0.2
4,223,252	-		GFF4199	0.30	-0.5
4,223,257	-		GFF4199	0.31	-0.7
4,223,261	+		GFF4199	0.31	-1.3
4,223,303	+		GFF4199	0.34	-1.9
4,223,322	-		GFF4199	0.35	-1.6
4,223,323	-		GFF4199	0.35	+0.6
4,223,331	+		GFF4199	0.35	-0.7
4,223,346	-		GFF4199	0.36	+0.1
4,223,351	-		GFF4199	0.37	-2.2
4,223,353	+		GFF4199	0.37	-2.4
4,223,353	+		GFF4199	0.37	-0.6
4,223,353	+		GFF4199	0.37	+0.3
4,223,356	-		GFF4199	0.37	+1.0
4,223,356	-		GFF4199	0.37	-0.5
4,223,356	-		GFF4199	0.37	-0.9
4,223,364	-		GFF4199	0.38	-0.8
4,223,376	+		GFF4199	0.38	-1.2
4,223,377	-		GFF4199	0.38	+0.4
4,223,392	+		GFF4199	0.39	+1.4
4,223,400	-		GFF4199	0.40	-0.4
4,223,408	+		GFF4199	0.40	-0.2
4,223,416	-		GFF4199	0.41	+0.8
4,223,433	+		GFF4199	0.42	-0.3
4,223,441	-		GFF4199	0.43	-0.5
4,223,455	+		GFF4199	0.43	+0.6
4,223,463	-		GFF4199	0.44	-0.7
4,223,472	-		GFF4199	0.45	+0.1
4,223,481	+		GFF4199	0.45	-0.7
4,223,488	+		GFF4199	0.46	+0.2
4,223,488	+		GFF4199	0.46	-0.6
4,223,488	+		GFF4199	0.46	-0.1
4,223,489	-		GFF4199	0.46	+0.5
4,223,489	-		GFF4199	0.46	-2.0
4,223,489	-		GFF4199	0.46	-1.2
4,223,489	-		GFF4199	0.46	-0.8
4,223,496	+		GFF4199	0.46	-1.5
4,223,496	-		GFF4199	0.46	-0.5
4,223,496	-		GFF4199	0.46	-0.5
4,223,496	-		GFF4199	0.46	-0.6
4,223,496	-		GFF4199	0.46	-0.2
4,223,509	+		GFF4199	0.47	-1.8
4,223,524	+		GFF4199	0.48	-1.0
4,223,532	-		GFF4199	0.48	-1.6
4,223,565	-		GFF4199	0.51	-0.2
4,223,588	+		GFF4199	0.52	-1.4
4,223,603	+		GFF4199	0.53	-1.9
4,223,604	-		GFF4199	0.53	-0.2
4,223,663	+		GFF4199	0.57	-0.6
4,223,663	-		GFF4199	0.57	+1.2
4,223,663	-		GFF4199	0.57	-0.5
4,223,663	-		GFF4199	0.57	-0.5
4,223,698	+		GFF4199	0.59	-0.4
4,223,699	+		GFF4199	0.59	+1.0
4,223,699	+		GFF4199	0.59	+0.1
4,223,699	+		GFF4199	0.59	-1.7
4,223,699	+		GFF4199	0.59	-1.6
4,223,699	+		GFF4199	0.59	+1.2
4,223,699	+		GFF4199	0.59	-0.5
4,223,699	+		GFF4199	0.59	+1.5
4,223,699	+		GFF4199	0.59	-0.9
4,223,699	+		GFF4199	0.59	-1.0
4,223,699	+		GFF4199	0.59	-0.4
4,223,699	+		GFF4199	0.59	+0.1
4,223,699	+		GFF4199	0.59	-1.3
4,223,699	+		GFF4199	0.59	-0.7
4,223,699	+		GFF4199	0.59	-0.8
4,223,699	+		GFF4199	0.59	-0.1
4,223,704	+		GFF4199	0.60	-1.9
4,223,707	-		GFF4199	0.60	+0.8
4,223,707	-		GFF4199	0.60	+0.4
4,223,707	-		GFF4199	0.60	-1.1
4,223,707	-		GFF4199	0.60	-0.1
4,223,707	-		GFF4199	0.60	-0.5
4,223,707	-		GFF4199	0.60	-0.2
4,223,707	-		GFF4199	0.60	-1.6
4,223,707	-		GFF4199	0.60	+0.0
4,223,707	-		GFF4199	0.60	-2.2
4,223,709	+		GFF4199	0.60	-0.5
4,223,709	+		GFF4199	0.60	-0.7
4,223,709	+		GFF4199	0.60	-0.4
4,223,709	+		GFF4199	0.60	-0.0
4,223,709	+		GFF4199	0.60	-1.6
4,223,709	+		GFF4199	0.60	-2.0
4,223,709	+		GFF4199	0.60	+0.3
4,223,755	+		GFF4199	0.63	-0.4
4,223,764	-		GFF4199	0.64	-1.2
4,223,803	+		GFF4199	0.66	-1.7
4,223,806	+		GFF4199	0.66	+0.7
4,223,835	+		GFF4199	0.68	-0.4
4,223,848	-		GFF4199	0.69	+1.9
4,223,897	-		GFF4199	0.72	-0.1
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4,224,202	-				-0.6
4,224,213	+				-1.0
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4,224,306	+				+0.1
4,224,306	+				-0.2
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4,224,410	+				-0.3
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4,224,418	-				+0.8
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4,224,738	+				+1.2
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4,224,746	-				-1.4
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4,224,862	-				+0.3
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4,225,076	+				+0.1
4,225,084	-				-0.1
4,225,084	-				-0.9
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4,225,101	+				-0.3
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4,225,109	-				+0.1
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4,225,195	+				-0.6
4,225,214	+				-1.1
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4,225,270	+				+0.7
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4,225,278	-				-1.3
4,225,278	-				-0.2
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