Strain Fitness in Sphingobium sp. HT1-2 around GFF4119

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
4,139,703	-		GFF4118	0.67	+0.2
4,139,728	+		GFF4118	0.68	-0.7
4,139,768	-		GFF4118	0.70	-0.3
4,139,768	-		GFF4118	0.70	-0.7
4,139,768	-		GFF4118	0.70	+0.6
4,139,794	+		GFF4118	0.71	-0.7
4,139,797	-		GFF4118	0.71	-0.3
4,139,797	-		GFF4118	0.71	-0.7
4,139,817	+		GFF4118	0.72	+0.4
4,139,830	-		GFF4118	0.73	+0.3
4,139,830	-		GFF4118	0.73	-1.2
4,139,842	+		GFF4118	0.73	-1.5
4,139,842	+		GFF4118	0.73	-1.1
4,139,842	+		GFF4118	0.73	-1.1
4,139,842	+		GFF4118	0.73	+0.6
4,139,848	+		GFF4118	0.73	-0.9
4,139,850	-		GFF4118	0.74	-0.3
4,139,850	-		GFF4118	0.74	-1.7
4,139,850	-		GFF4118	0.74	+0.4
4,139,858	+		GFF4118	0.74	-0.1
4,139,861	-		GFF4118	0.74	-0.4
4,139,863	+		GFF4118	0.74	+0.8
4,139,873	+		GFF4118	0.74	-0.3
4,139,910	+		GFF4118	0.76	-0.7
4,139,929	-		GFF4118	0.77	+1.5
4,139,929	-		GFF4118	0.77	-0.9
4,139,939	+		GFF4118	0.77	-0.5
4,139,947	-		GFF4118	0.78	+0.3
4,139,947	-		GFF4118	0.78	+0.2
4,139,949	+		GFF4118	0.78	-0.3
4,139,954	+		GFF4118	0.78	-1.7
4,139,954	+		GFF4118	0.78	+0.4
4,139,954	+		GFF4118	0.78	-1.0
4,139,954	+		GFF4118	0.78	-0.7
4,139,954	+		GFF4118	0.78	-1.2
4,139,954	+		GFF4118	0.78	-0.7
4,139,954	+		GFF4118	0.78	+0.4
4,139,954	+		GFF4118	0.78	-2.3
4,139,954	+		GFF4118	0.78	-1.2
4,139,954	+		GFF4118	0.78	-0.1
4,139,954	+		GFF4118	0.78	+0.1
4,139,962	-		GFF4118	0.78	+0.3
4,139,962	-		GFF4118	0.78	-0.7
4,139,962	-		GFF4118	0.78	+0.8
4,139,962	-		GFF4118	0.78	-1.8
4,139,962	-		GFF4118	0.78	-0.6
4,139,962	-		GFF4118	0.78	+0.1
4,139,962	-		GFF4118	0.78	-0.1
4,139,962	-		GFF4118	0.78	-2.1
4,139,962	-		GFF4118	0.78	+1.4
4,139,962	-		GFF4118	0.78	-0.4
4,139,983	+		GFF4118	0.79	-1.5
4,140,004	+		GFF4118	0.80	-1.6
4,140,017	-		GFF4118	0.80	-0.6
4,140,024	+		GFF4118	0.81	-0.1
4,140,024	+		GFF4118	0.81	+0.4
4,140,024	+		GFF4118	0.81	-0.7
4,140,024	+		GFF4118	0.81	-0.4
4,140,024	+		GFF4118	0.81	-0.6
4,140,024	+		GFF4118	0.81	-0.3
4,140,025	+		GFF4118	0.81	-0.2
4,140,032	-		GFF4118	0.81	-1.2
4,140,032	-		GFF4118	0.81	-0.8
4,140,032	-		GFF4118	0.81	+0.7
4,140,032	-		GFF4118	0.81	-0.9
4,140,032	-		GFF4118	0.81	-0.7
4,140,032	-		GFF4118	0.81	+0.3
4,140,032	-		GFF4118	0.81	-1.6
4,140,032	-		GFF4118	0.81	+0.1
4,140,032	-		GFF4118	0.81	-0.3
4,140,032	-		GFF4118	0.81	-1.2
4,140,032	-		GFF4118	0.81	-0.8
4,140,032	-		GFF4118	0.81	+0.2
4,140,033	-		GFF4118	0.81	-0.5
4,140,033	-		GFF4118	0.81	-1.3
4,140,033	-		GFF4118	0.81	-2.2
4,140,033	-		GFF4118	0.81	+1.1
4,140,033	-		GFF4118	0.81	-0.0
4,140,057	-		GFF4118	0.82	-0.2
4,140,058	+		GFF4118	0.82	-0.3
4,140,058	+		GFF4118	0.82	-0.1
4,140,066	+		GFF4118	0.82	-0.6
4,140,066	-		GFF4118	0.82	-0.1
4,140,066	-		GFF4118	0.82	+0.3
4,140,074	-		GFF4118	0.83	-2.1
4,140,082	+		GFF4118	0.83	-1.0
4,140,082	+		GFF4118	0.83	-0.3
4,140,085	-		GFF4118	0.83	+0.5
4,140,105	+		GFF4118	0.84	-0.9
4,140,113	-		GFF4118	0.84	+0.1
4,140,120	-		GFF4118	0.85	-1.0
4,140,134	-		GFF4118	0.85	+0.3
4,140,144	-		GFF4118	0.86	-0.4
4,140,164	+		GFF4118	0.87	-0.7
4,140,170	+		GFF4118	0.87	-2.5
4,140,189	-		GFF4118	0.88	-1.5
4,140,189	-		GFF4118	0.88	+0.4
4,140,245	-		GFF4118	0.90	-1.8
4,140,275	+				-0.4
4,140,275	+				-1.3
4,140,275	+				+1.2
4,140,275	+				-1.4
4,140,282	+				-2.2
4,140,283	-				-1.3
4,140,283	-				-0.3
4,140,283	-				+0.5
4,140,283	-				-1.0
4,140,304	+				-0.8
4,140,312	-				-0.0
4,140,408	-				+0.7
4,140,409	+				-0.1
4,140,417	-				-1.5
4,140,431	+				-1.7
4,140,446	+				-0.4
4,140,464	+				-1.5
4,140,464	+				-1.5
4,140,464	+				-0.3
4,140,472	-				-2.0
4,140,472	-				-0.7
4,140,496	+				-1.5
4,140,496	+				+0.4
4,140,504	-				-0.2
4,140,504	-				-1.3
4,140,505	-				+0.5
4,140,508	+				+0.0
4,140,533	+				-0.3
4,140,533	-				-0.2
4,140,535	+				-1.2
4,140,543	-				-0.2
4,140,543	-				-1.6
4,140,558	-				-2.4
4,140,576	-				-0.2
4,140,588	+				+0.1
4,140,596	-				+0.3
4,140,626	-				+0.0
4,140,635	-				-1.5
4,140,641	-				-0.2
4,140,644	+				-0.6
4,140,657	-				+0.1
4,140,673	+				-2.0
4,140,693	+				-0.4
4,140,696	+				-2.4
4,140,725	+				-0.4
4,140,735	-				-1.4
4,140,745	+				+0.6
4,140,753	-				+0.5
4,140,753	-				-1.5
4,140,753	-				+0.0
4,140,755	+				+0.8
4,140,763	-				-1.3
4,140,763	-				-1.2
4,140,817	-				-0.0
4,140,839	-				-0.4
4,140,863	-				-3.1
4,140,864	+				-2.0
4,140,878	-				-2.4
4,140,882	+				+0.5
4,140,914	-		GFF4119	0.11	-0.4
4,140,921	-		GFF4119	0.11	-1.4
4,140,930	+		GFF4119	0.11	-1.0
4,140,930	+		GFF4119	0.11	-1.3
4,140,930	+		GFF4119	0.11	-0.8
4,140,930	+		GFF4119	0.11	+0.9
4,140,932	+		GFF4119	0.12	+0.1
4,140,938	-		GFF4119	0.12	-0.2
4,140,938	-		GFF4119	0.12	+0.6
4,140,940	+		GFF4119	0.12	-0.7
4,140,940	+		GFF4119	0.12	-0.1
4,140,940	+		GFF4119	0.12	-1.2
4,140,948	-		GFF4119	0.12	+0.8
4,140,948	-		GFF4119	0.12	+1.4
4,140,948	-		GFF4119	0.12	-1.2
4,140,964	+		GFF4119	0.13	-0.7
4,140,975	-		GFF4119	0.13	-1.6
4,141,002	+		GFF4119	0.15	-1.0
4,141,002	+		GFF4119	0.15	-1.7
4,141,010	-		GFF4119	0.15	-0.1
4,141,010	-		GFF4119	0.15	-0.1
4,141,030	+		GFF4119	0.16	+0.3
4,141,035	+		GFF4119	0.16	-0.9
4,141,035	+		GFF4119	0.16	-0.6
4,141,035	+		GFF4119	0.16	-1.4
4,141,035	+		GFF4119	0.16	+0.5
4,141,043	-		GFF4119	0.16	-0.2
4,141,043	-		GFF4119	0.16	+0.0
4,141,043	-		GFF4119	0.16	-0.5
4,141,043	-		GFF4119	0.16	-1.5
4,141,045	+		GFF4119	0.16	-0.2
4,141,057	+		GFF4119	0.17	-0.3
4,141,101	-		GFF4119	0.19	-0.3
4,141,106	-		GFF4119	0.19	-2.0
4,141,126	+		GFF4119	0.20	+0.7
4,141,126	-		GFF4119	0.20	-0.2
4,141,153	-		GFF4119	0.21	-0.6
4,141,243	+		GFF4119	0.25	-0.1
4,141,251	+		GFF4119	0.25	-1.4
4,141,251	+		GFF4119	0.25	-0.6
4,141,259	-		GFF4119	0.25	-2.2
4,141,270	+		GFF4119	0.26	+0.8
4,141,270	+		GFF4119	0.26	-0.5
4,141,270	+		GFF4119	0.26	-1.3
4,141,270	+		GFF4119	0.26	-1.6
4,141,270	+		GFF4119	0.26	-1.2
4,141,270	+		GFF4119	0.26	+0.6
4,141,271	+		GFF4119	0.26	-2.3
4,141,278	-		GFF4119	0.26	+0.8
4,141,278	-		GFF4119	0.26	-0.8
4,141,278	-		GFF4119	0.26	-2.6
4,141,278	-		GFF4119	0.26	+0.4
4,141,278	-		GFF4119	0.26	-0.5
4,141,290	+		GFF4119	0.27	-1.3
4,141,290	+		GFF4119	0.27	-1.1
4,141,290	+		GFF4119	0.27	-1.2
4,141,290	+		GFF4119	0.27	+0.5
4,141,297	-		GFF4119	0.27	+0.0
4,141,298	-		GFF4119	0.27	+0.5
4,141,298	-		GFF4119	0.27	-1.5
4,141,300	+		GFF4119	0.27	+0.5
4,141,314	-		GFF4119	0.28	-0.7
4,141,327	+		GFF4119	0.28	-0.1
4,141,327	+		GFF4119	0.28	+0.0
4,141,338	+		GFF4119	0.29	-1.1
4,141,343	+		GFF4119	0.29	-0.3
4,141,343	+		GFF4119	0.29	-1.1
4,141,343	+		GFF4119	0.29	+0.7
4,141,350	+		GFF4119	0.29	-0.3
4,141,350	+		GFF4119	0.29	+0.4
4,141,351	-		GFF4119	0.29	+0.4
4,141,351	-		GFF4119	0.29	+1.3
4,141,351	-		GFF4119	0.29	-0.6
4,141,356	+		GFF4119	0.30	+0.1
4,141,358	-		GFF4119	0.30	+0.3
4,141,364	-		GFF4119	0.30	+0.7
4,141,374	-		GFF4119	0.30	+0.8
4,141,406	-		GFF4119	0.32	-1.1
4,141,423	+		GFF4119	0.32	-1.3
4,141,464	+		GFF4119	0.34	-0.0
4,141,472	-		GFF4119	0.34	+0.6
4,141,524	+		GFF4119	0.37	-0.5
4,141,524	-		GFF4119	0.37	+0.1
4,141,532	-		GFF4119	0.37	-0.7
4,141,576	-		GFF4119	0.39	-1.1
4,141,592	+		GFF4119	0.40	-1.7
4,141,606	+		GFF4119	0.40	-1.1
4,141,615	-		GFF4119	0.41	+1.0
4,141,615	-		GFF4119	0.41	-1.8
4,141,660	+		GFF4119	0.42	+0.5
4,141,668	+		GFF4119	0.43	-0.7
4,141,668	+		GFF4119	0.43	-0.4
4,141,668	-		GFF4119	0.43	+0.5
4,141,676	-		GFF4119	0.43	+1.3
4,141,676	-		GFF4119	0.43	-0.9
4,141,707	+		GFF4119	0.44	-1.2
4,141,707	+		GFF4119	0.44	-0.5
4,141,707	+		GFF4119	0.44	-1.5
4,141,707	+		GFF4119	0.44	-0.2
4,141,707	+		GFF4119	0.44	-0.3
4,141,707	+		GFF4119	0.44	+0.8
4,141,707	+		GFF4119	0.44	+1.0
4,141,707	+		GFF4119	0.44	-1.2
4,141,707	+		GFF4119	0.44	-0.8
4,141,707	+		GFF4119	0.44	-1.1
4,141,707	+		GFF4119	0.44	+0.0
4,141,707	+		GFF4119	0.44	+0.3
4,141,707	+		GFF4119	0.44	-2.3
4,141,707	+		GFF4119	0.44	+0.8
4,141,707	+		GFF4119	0.44	-1.4
4,141,715	-		GFF4119	0.45	+0.0
4,141,715	-		GFF4119	0.45	+0.0
4,141,715	-		GFF4119	0.45	-1.3
4,141,715	-		GFF4119	0.45	+0.1
4,141,715	-		GFF4119	0.45	-0.6
4,141,715	-		GFF4119	0.45	-0.7
4,141,715	-		GFF4119	0.45	+1.7
4,141,715	-		GFF4119	0.45	-0.5
4,141,715	-		GFF4119	0.45	-0.1
4,141,749	-		GFF4119	0.46	-0.4
4,141,749	-		GFF4119	0.46	+1.2
4,141,771	+		GFF4119	0.47	-2.4
4,141,775	+		GFF4119	0.47	-0.4
4,141,780	+		GFF4119	0.48	+0.3
4,141,783	-		GFF4119	0.48	-0.8
4,141,785	-		GFF4119	0.48	+0.7
4,141,840	-		GFF4119	0.50	-2.3
4,141,851	+		GFF4119	0.51	-1.0
4,141,859	+		GFF4119	0.51	-2.0
4,141,859	+		GFF4119	0.51	-0.9
4,141,859	-		GFF4119	0.51	-0.6
4,141,865	+		GFF4119	0.51	+1.3
4,141,865	+		GFF4119	0.51	+0.0
4,141,867	-		GFF4119	0.51	-0.5
4,141,868	-		GFF4119	0.51	-0.5
4,141,872	-		GFF4119	0.51	-0.3
4,141,874	+		GFF4119	0.52	+0.0
4,141,877	+		GFF4119	0.52	-0.1
4,141,887	+		GFF4119	0.52	-1.0
4,141,887	+		GFF4119	0.52	+0.6
4,141,889	+		GFF4119	0.52	-2.0
4,141,892	+		GFF4119	0.52	+0.5
4,141,892	+		GFF4119	0.52	+0.0
4,141,895	-		GFF4119	0.52	+0.8
4,141,895	-		GFF4119	0.52	-1.3
4,141,895	-		GFF4119	0.52	+0.2
4,141,895	-		GFF4119	0.52	-1.1
4,141,922	-		GFF4119	0.54	+1.5
4,141,925	+		GFF4119	0.54	+0.4
4,141,933	-		GFF4119	0.54	+0.9
4,141,954	-		GFF4119	0.55	-0.9
4,141,956	+		GFF4119	0.55	-1.2
4,141,956	+		GFF4119	0.55	-2.1
4,141,964	-		GFF4119	0.55	-0.1
4,141,964	-		GFF4119	0.55	-1.4
4,141,966	+		GFF4119	0.55	-1.4
4,141,966	+		GFF4119	0.55	+0.4
4,141,966	+		GFF4119	0.55	-0.6
4,141,966	+		GFF4119	0.55	+0.1
4,141,966	+		GFF4119	0.55	-0.2
4,141,966	-		GFF4119	0.55	+0.4
4,141,972	+		GFF4119	0.56	-2.2
4,141,972	+		GFF4119	0.56	+0.1
4,141,974	-		GFF4119	0.56	+0.5
4,141,974	-		GFF4119	0.56	-1.4
4,141,974	-		GFF4119	0.56	-0.3
4,141,974	-		GFF4119	0.56	-0.2
4,141,974	-		GFF4119	0.56	-0.6
4,141,980	-		GFF4119	0.56	-0.8
4,141,985	-		GFF4119	0.56	-0.7
4,142,018	+		GFF4119	0.58	+0.6
4,142,028	+		GFF4119	0.58	+0.7
4,142,028	+		GFF4119	0.58	-1.0
4,142,028	+		GFF4119	0.58	-2.0
4,142,028	+		GFF4119	0.58	-0.7
4,142,028	+		GFF4119	0.58	-1.7
4,142,028	+		GFF4119	0.58	-0.8
4,142,028	+		GFF4119	0.58	+0.3
4,142,028	+		GFF4119	0.58	-1.4
4,142,036	-		GFF4119	0.58	-0.2
4,142,036	-		GFF4119	0.58	-0.5
4,142,036	-		GFF4119	0.58	-0.8
4,142,036	-		GFF4119	0.58	-2.4
4,142,036	-		GFF4119	0.58	-1.5
4,142,036	-		GFF4119	0.58	+0.0
4,142,036	-		GFF4119	0.58	-0.2
4,142,036	-		GFF4119	0.58	+1.2
4,142,038	+		GFF4119	0.58	-1.1
4,142,094	+		GFF4119	0.61	+0.2
4,142,104	+		GFF4119	0.61	-1.4
4,142,111	+		GFF4119	0.62	+0.8
4,142,113	+		GFF4119	0.62	+1.0
4,142,113	-		GFF4119	0.62	+0.0
4,142,130	-		GFF4119	0.62	-1.2
4,142,135	+		GFF4119	0.63	-1.7
4,142,147	+		GFF4119	0.63	-1.8
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