Strain Fitness in Sphingobium sp. HT1-2 around GFF2987

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
3,042,027	+		GFF2986	0.62	+0.4
3,042,035	-		GFF2986	0.63	+1.2
3,042,035	-		GFF2986	0.63	+0.0
3,042,038	+		GFF2986	0.63	-0.4
3,042,048	+		GFF2986	0.63	-1.0
3,042,048	+		GFF2986	0.63	-1.4
3,042,052	+		GFF2986	0.63	+0.9
3,042,069	+		GFF2986	0.64	+1.0
3,042,081	+		GFF2986	0.64	-0.1
3,042,089	-		GFF2986	0.65	-1.9
3,042,091	-		GFF2986	0.65	-0.3
3,042,096	-		GFF2986	0.65	-0.5
3,042,117	+		GFF2986	0.66	+1.1
3,042,117	+		GFF2986	0.66	+0.6
3,042,117	+		GFF2986	0.66	+1.1
3,042,117	+		GFF2986	0.66	+0.6
3,042,117	+		GFF2986	0.66	-0.9
3,042,117	+		GFF2986	0.66	-0.3
3,042,117	+		GFF2986	0.66	+0.8
3,042,117	+		GFF2986	0.66	-0.2
3,042,117	+		GFF2986	0.66	-0.6
3,042,117	+		GFF2986	0.66	-1.7
3,042,117	+		GFF2986	0.66	+0.0
3,042,117	+		GFF2986	0.66	-1.8
3,042,124	-		GFF2986	0.66	-0.8
3,042,125	-		GFF2986	0.66	-0.7
3,042,125	-		GFF2986	0.66	-0.3
3,042,125	-		GFF2986	0.66	+1.0
3,042,125	-		GFF2986	0.66	-0.5
3,042,125	-		GFF2986	0.66	+0.8
3,042,125	-		GFF2986	0.66	+0.9
3,042,125	-		GFF2986	0.66	-0.2
3,042,125	-		GFF2986	0.66	-0.4
3,042,125	-		GFF2986	0.66	-0.2
3,042,125	-		GFF2986	0.66	+0.2
3,042,125	-		GFF2986	0.66	+0.9
3,042,125	-		GFF2986	0.66	-0.2
3,042,125	-		GFF2986	0.66	-1.0
3,042,125	-		GFF2986	0.66	-0.6
3,042,125	-		GFF2986	0.66	+0.4
3,042,125	-		GFF2986	0.66	-0.6
3,042,145	+		GFF2986	0.67	-0.3
3,042,149	-		GFF2986	0.67	-2.2
3,042,153	-		GFF2986	0.67	-1.1
3,042,168	+		GFF2986	0.68	-0.6
3,042,168	+		GFF2986	0.68	-1.5
3,042,173	+		GFF2986	0.68	-0.0
3,042,173	+		GFF2986	0.68	-1.4
3,042,181	-		GFF2986	0.68	-0.2
3,042,181	-		GFF2986	0.68	-1.7
3,042,188	+		GFF2986	0.68	+0.8
3,042,193	+		GFF2986	0.69	-1.8
3,042,196	-		GFF2986	0.69	-0.4
3,042,207	+		GFF2986	0.69	-0.7
3,042,222	+		GFF2986	0.70	-0.2
3,042,222	+		GFF2986	0.70	-0.5
3,042,225	-		GFF2986	0.70	+0.9
3,042,225	-		GFF2986	0.70	+0.9
3,042,225	-		GFF2986	0.70	-0.9
3,042,225	-		GFF2986	0.70	+0.1
3,042,225	-		GFF2986	0.70	+0.6
3,042,230	-		GFF2986	0.70	+0.1
3,042,239	+		GFF2986	0.70	+1.0
3,042,239	+		GFF2986	0.70	+1.3
3,042,249	-		GFF2986	0.71	-0.7
3,042,295	-		GFF2986	0.72	-1.4
3,042,298	+		GFF2986	0.73	-1.4
3,042,300	-		GFF2986	0.73	-0.1
3,042,300	-		GFF2986	0.73	-1.3
3,042,304	+		GFF2986	0.73	+0.2
3,042,304	+		GFF2986	0.73	-0.1
3,042,343	-		GFF2986	0.74	-0.5
3,042,345	+		GFF2986	0.74	-1.2
3,042,345	-		GFF2986	0.74	-1.5
3,042,352	+		GFF2986	0.75	+0.5
3,042,352	+		GFF2986	0.75	-1.5
3,042,360	+		GFF2986	0.75	+0.4
3,042,366	+		GFF2986	0.75	-1.6
3,042,366	+		GFF2986	0.75	-0.8
3,042,366	+		GFF2986	0.75	-2.3
3,042,366	+		GFF2986	0.75	-0.3
3,042,366	+		GFF2986	0.75	+0.3
3,042,366	+		GFF2986	0.75	+0.5
3,042,366	+		GFF2986	0.75	-1.2
3,042,366	+		GFF2986	0.75	+0.7
3,042,366	+		GFF2986	0.75	-0.6
3,042,366	+		GFF2986	0.75	-1.1
3,042,366	+		GFF2986	0.75	-0.0
3,042,366	+		GFF2986	0.75	-0.2
3,042,366	+		GFF2986	0.75	-0.1
3,042,366	+		GFF2986	0.75	-1.1
3,042,366	+		GFF2986	0.75	-2.0
3,042,366	+		GFF2986	0.75	-0.4
3,042,366	+		GFF2986	0.75	-0.9
3,042,374	-		GFF2986	0.75	+0.6
3,042,374	-		GFF2986	0.75	-1.1
3,042,374	-		GFF2986	0.75	+0.2
3,042,374	-		GFF2986	0.75	-2.1
3,042,374	-		GFF2986	0.75	-1.2
3,042,374	-		GFF2986	0.75	+0.9
3,042,374	-		GFF2986	0.75	+0.2
3,042,374	-		GFF2986	0.75	+0.6
3,042,374	-		GFF2986	0.75	-0.1
3,042,374	-		GFF2986	0.75	-1.1
3,042,374	-		GFF2986	0.75	+1.0
3,042,374	-		GFF2986	0.75	+0.1
3,042,374	-		GFF2986	0.75	-0.4
3,042,374	-		GFF2986	0.75	-0.7
3,042,374	-		GFF2986	0.75	-0.7
3,042,374	-		GFF2986	0.75	-0.4
3,042,374	-		GFF2986	0.75	+0.1
3,042,374	-		GFF2986	0.75	+0.7
3,042,374	-		GFF2986	0.75	+1.5
3,042,374	-		GFF2986	0.75	-1.1
3,042,374	-		GFF2986	0.75	+0.7
3,042,374	-		GFF2986	0.75	-0.3
3,042,374	-		GFF2986	0.75	-0.3
3,042,374	-		GFF2986	0.75	-0.1
3,042,374	-		GFF2986	0.75	+0.3
3,042,374	-		GFF2986	0.75	+0.4
3,042,374	-		GFF2986	0.75	-1.3
3,042,383	+		GFF2986	0.76	+0.2
3,042,390	+		GFF2986	0.76	-0.1
3,042,391	-		GFF2986	0.76	-0.9
3,042,397	+		GFF2986	0.76	+0.9
3,042,397	+		GFF2986	0.76	-1.1
3,042,398	-		GFF2986	0.76	+0.1
3,042,405	-		GFF2986	0.77	-0.4
3,042,405	-		GFF2986	0.77	-0.3
3,042,405	-		GFF2986	0.77	-0.2
3,042,429	-		GFF2986	0.77	+0.8
3,042,432	+		GFF2986	0.78	-0.8
3,042,435	-		GFF2986	0.78	+1.1
3,042,440	-		GFF2986	0.78	-2.1
3,042,442	+		GFF2986	0.78	-0.1
3,042,450	-		GFF2986	0.78	-0.3
3,042,454	+		GFF2986	0.78	-1.0
3,042,462	-		GFF2986	0.79	+0.7
3,042,464	+		GFF2986	0.79	+1.0
3,042,464	+		GFF2986	0.79	+0.2
3,042,472	-		GFF2986	0.79	-2.2
3,042,486	+		GFF2986	0.80	+0.5
3,042,496	+		GFF2986	0.80	-2.2
3,042,502	-		GFF2986	0.80	+0.4
3,042,504	-		GFF2986	0.80	+0.5
3,042,511	+		GFF2986	0.81	+0.1
3,042,527	+		GFF2986	0.81	+0.6
3,042,535	-		GFF2986	0.81	-0.0
3,042,546	+		GFF2986	0.82	-2.0
3,042,546	+		GFF2986	0.82	-0.8
3,042,564	-		GFF2986	0.83	-0.7
3,042,566	+		GFF2986	0.83	-0.7
3,042,568	+		GFF2986	0.83	-0.6
3,042,578	+		GFF2986	0.83	+0.4
3,042,578	+		GFF2986	0.83	+0.2
3,042,586	-		GFF2986	0.83	-0.4
3,042,586	-		GFF2986	0.83	-0.2
3,042,594	-		GFF2986	0.84	-0.1
3,042,596	+		GFF2986	0.84	+0.2
3,042,628	-		GFF2986	0.85	-3.0
3,042,630	+		GFF2986	0.85	-0.5
3,042,633	-		GFF2986	0.85	-0.5
3,042,633	-		GFF2986	0.85	+0.9
3,042,646	+		GFF2986	0.86	-1.6
3,042,646	+		GFF2986	0.86	+0.4
3,042,646	+		GFF2986	0.86	-0.6
3,042,646	+		GFF2986	0.86	+1.5
3,042,654	-		GFF2986	0.86	-1.8
3,042,654	-		GFF2986	0.86	-0.1
3,042,654	-		GFF2986	0.86	-1.2
3,042,655	-		GFF2986	0.86	-2.6
3,042,657	+		GFF2986	0.86	-1.6
3,042,657	+		GFF2986	0.86	-1.0
3,042,657	+		GFF2986	0.86	-0.5
3,042,659	-		GFF2986	0.86	-1.0
3,042,665	-		GFF2986	0.86	+1.1
3,042,665	-		GFF2986	0.86	-0.6
3,042,665	-		GFF2986	0.86	+1.1
3,042,665	-		GFF2986	0.86	-1.6
3,042,665	-		GFF2986	0.86	-0.0
3,042,672	+		GFF2986	0.87	-1.0
3,042,678	-		GFF2986	0.87	-0.3
3,042,680	-		GFF2986	0.87	-0.9
3,042,680	-		GFF2986	0.87	+0.3
3,042,680	-		GFF2986	0.87	+0.6
3,042,680	-		GFF2986	0.87	+1.3
3,042,680	-		GFF2986	0.87	+1.0
3,042,684	-		GFF2986	0.87	+0.7
3,042,689	-		GFF2986	0.87	-1.6
3,042,689	-		GFF2986	0.87	-0.4
3,042,707	+		GFF2986	0.88	+0.3
3,042,745	-		GFF2986	0.89	-1.2
3,042,752	-		GFF2986	0.90	-0.1
3,042,762	+				-0.3
3,042,770	-				+0.9
3,042,770	-				-1.1
3,042,772	+				+0.6
3,042,780	-				+0.2
3,042,787	+				-0.6
3,042,791	-				-1.3
3,042,791	-				-0.2
3,042,796	-				+0.7
3,042,823	+				-1.2
3,042,831	-				-0.3
3,042,839	-				+0.6
3,042,848	+				-0.6
3,042,848	+				+1.0
3,042,849	+				-0.6
3,042,849	+				-0.4
3,042,856	-				+0.9
3,042,857	-				+0.4
3,042,858	+				+0.6
3,042,859	+				+0.1
3,042,870	+				-0.8
3,042,878	-				+0.8
3,042,881	+				-0.9
3,042,884	-				-0.3
3,042,884	-				+0.4
3,042,892	+				-2.0
3,042,892	+				-0.3
3,042,892	+				-2.7
3,042,892	+				+0.4
3,042,893	+				-0.1
3,042,893	+				-1.4
3,042,893	+				+0.2
3,042,898	+				-0.2
3,042,900	-				-0.7
3,042,901	-				-0.8
3,042,905	+				-0.8
3,042,924	+				-2.2
3,042,924	+				-0.8
3,042,926	-				+0.6
3,042,942	+				-2.2
3,042,942	+				-0.4
3,042,950	-				+1.2
3,042,963	+				+0.2
3,042,963	+				-1.0
3,042,963	+				-1.4
3,042,968	+				-0.2
3,042,971	-				-1.1
3,042,971	-				-0.2
3,042,981	-				+0.4
3,042,987	+				+0.2
3,042,987	+				+0.4
3,042,987	+				-1.8
3,042,991	-				+0.1
3,042,995	-				-0.2
3,042,995	-				+0.3
3,043,018	-				-0.4
3,043,018	-				-1.5
3,043,030	-				-1.4
3,043,071	-				-1.4
3,043,076	+				+0.4
3,043,080	+				+0.8
3,043,080	+				+1.3
3,043,088	-				+0.0
3,043,088	-				+1.2
3,043,089	-				+1.4
3,043,090	+				-0.7
3,043,090	+				+0.6
3,043,090	+				+0.7
3,043,098	-		GFF2987	0.11	-1.7
3,043,098	-		GFF2987	0.11	+0.5
3,043,103	-		GFF2987	0.11	+0.1
3,043,141	+		GFF2987	0.17	-0.6
3,043,149	-		GFF2987	0.18	-0.6
3,043,153	-		GFF2987	0.19	+1.3
3,043,160	-		GFF2987	0.20	+1.2
3,043,172	+		GFF2987	0.21	-0.6
3,043,172	+		GFF2987	0.21	+0.7
3,043,180	-		GFF2987	0.22	-0.5
3,043,182	+		GFF2987	0.23	+1.5
3,043,189	-		GFF2987	0.24	-0.8
3,043,189	-		GFF2987	0.24	-1.1
3,043,191	+		GFF2987	0.24	+0.9
3,043,195	-		GFF2987	0.25	+0.7
3,043,195	-		GFF2987	0.25	-0.3
3,043,195	-		GFF2987	0.25	-0.1
3,043,195	-		GFF2987	0.25	-0.7
3,043,211	+		GFF2987	0.27	-1.0
3,043,211	+		GFF2987	0.27	+0.0
3,043,211	+		GFF2987	0.27	-0.4
3,043,217	+		GFF2987	0.28	-1.7
3,043,219	-		GFF2987	0.28	-0.6
3,043,240	-		GFF2987	0.31	+0.1
3,043,248	-		GFF2987	0.32	+0.9
3,043,255	-		GFF2987	0.33	-0.3
3,043,260	-		GFF2987	0.34	-0.3
3,043,300	+		GFF2987	0.40	+0.6
3,043,301	+		GFF2987	0.40	+0.1
3,043,303	+		GFF2987	0.40	-0.2
3,043,309	-		GFF2987	0.41	-0.3
3,043,313	-		GFF2987	0.42	-1.4
3,043,313	-		GFF2987	0.42	-1.2
3,043,324	+		GFF2987	0.43	-0.6
3,043,332	-		GFF2987	0.44	+0.6
3,043,338	+		GFF2987	0.45	-2.0
3,043,338	+		GFF2987	0.45	-0.3
3,043,346	+		GFF2987	0.46	-0.6
3,043,346	+		GFF2987	0.46	+1.2
3,043,351	-		GFF2987	0.47	+0.6
3,043,354	+		GFF2987	0.47	-0.5
3,043,354	+		GFF2987	0.47	+0.5
3,043,375	+		GFF2987	0.50	+0.0
3,043,378	-		GFF2987	0.51	+0.5
3,043,378	-		GFF2987	0.51	-0.2
3,043,393	-		GFF2987	0.53	-0.4
3,043,410	+		GFF2987	0.55	+0.8
3,043,451	+		GFF2987	0.61	+0.2
3,043,467	+		GFF2987	0.64	+0.0
3,043,467	+		GFF2987	0.64	-1.5
3,043,472	+		GFF2987	0.64	+0.4
3,043,472	+		GFF2987	0.64	-1.8
3,043,472	+		GFF2987	0.64	+0.2
3,043,474	+		GFF2987	0.65	+1.3
3,043,475	-		GFF2987	0.65	-1.3
3,043,482	+		GFF2987	0.66	+1.1
3,043,482	-		GFF2987	0.66	-0.8
3,043,483	+		GFF2987	0.66	-1.4
3,043,497	+		GFF2987	0.68	-0.5
3,043,517	+		GFF2987	0.71	-0.6
3,043,539	+		GFF2987	0.74	+0.3
3,043,555	-		GFF2987	0.76	-0.0
3,043,555	-		GFF2987	0.76	+1.5
3,043,564	+		GFF2987	0.78	-0.6
3,043,569	+		GFF2987	0.78	-0.6
3,043,644	+		GFF2987	0.89	-1.2
3,043,646	-		GFF2987	0.89	-0.3
3,043,668	-				-1.7
3,043,673	+				+0.4
3,043,683	+				+0.6
3,043,686	-				-0.6
3,043,689	+				+0.6
3,043,689	-				+0.2
3,043,697	+				-0.3
3,043,697	+				-1.6
3,043,705	-				-0.7
3,043,705	-				-0.4
3,043,705	-				-0.3
3,043,705	-				-1.0
3,043,705	-				+0.3
3,043,725	+				-0.2
3,043,736	+				-1.7
3,043,740	-				-0.8
3,043,740	-				+1.3
3,043,744	+				-1.2
3,043,744	+				+0.1
3,043,744	+				+0.5
3,043,745	-				+0.7
3,043,752	-				-1.2
3,043,752	-				+0.9
3,043,755	+				-0.3
3,043,755	+				-1.6
3,043,755	+				-0.2
3,043,755	+				+0.7
3,043,755	+				-1.2
3,043,755	+				-1.5
3,043,755	+				+0.0
3,043,755	+				-1.7
3,043,755	+				+1.7
3,043,755	+				-0.3
3,043,755	+				-1.1
3,043,760	+				-0.1
3,043,760	+				+0.9
3,043,760	+				+1.0
3,043,760	+				-0.3
3,043,763	-				+2.2
3,043,763	-				+0.7
3,043,763	-				-0.1
3,043,763	-				+0.0
3,043,763	-				-0.1
3,043,763	-				-0.1
3,043,763	-				-1.4
3,043,763	-				+0.4
3,043,763	-				-1.0
3,043,763	-				-0.2
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