Strain Fitness in Sphingobium sp. HT1-2 around GFF2617

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
2,637,665	+				-0.7
2,637,666	+				-0.4
2,637,666	+				+0.9
2,637,666	+				-0.2
2,637,666	+				+0.6
2,637,674	-				+1.4
2,637,676	+				+0.2
2,637,677	+				-2.0
2,637,677	+				-1.3
2,637,684	-				+0.5
2,637,685	-				-0.5
2,637,685	-				-1.3
2,637,685	-				-0.1
2,637,707	-				-1.3
2,637,711	+				+0.4
2,637,734	+				-0.3
2,637,735	-				-0.5
2,637,742	-				-0.8
2,637,742	-				+0.1
2,637,742	-				+1.0
2,637,743	-				-1.6
2,637,775	+				+1.0
2,637,775	+				+0.2
2,637,775	+				+0.3
2,637,775	+				-0.7
2,637,775	+				-1.2
2,637,780	+				+0.9
2,637,780	+				-0.7
2,637,780	+				+0.4
2,637,780	+				+0.7
2,637,780	+				+0.5
2,637,780	+				+0.3
2,637,780	+				-0.1
2,637,780	+				+0.6
2,637,780	+				-1.3
2,637,780	+				-0.7
2,637,780	+				-1.1
2,637,780	+				-1.0
2,637,780	+				-2.5
2,637,780	+				-1.6
2,637,780	+				+0.3
2,637,780	+				-0.2
2,637,780	+				-0.7
2,637,780	+				-1.3
2,637,780	+				-0.3
2,637,780	+				-1.3
2,637,783	-				+0.4
2,637,785	+				+0.8
2,637,788	-				+0.4
2,637,788	-				-1.3
2,637,788	-				-1.8
2,637,788	-				-1.2
2,637,788	-				+0.6
2,637,788	-				-1.1
2,637,788	-				+0.0
2,637,788	-				-0.3
2,637,788	-				-1.0
2,637,788	-				-0.5
2,637,788	-				+0.2
2,637,788	-				-1.3
2,637,788	-				-0.5
2,637,788	-				+0.9
2,637,788	-				+0.8
2,637,788	-				-0.7
2,637,788	-				+0.3
2,637,788	-				-0.5
2,637,788	-				+0.3
2,637,790	+				-1.3
2,637,793	-				-0.2
2,637,793	-				-0.3
2,637,798	-				+0.3
2,637,808	+				-2.0
2,637,808	+				-0.8
2,637,816	-				-0.8
2,637,820	+				+1.0
2,637,821	+				-0.6
2,637,821	+				+0.8
2,637,821	+				-0.6
2,637,826	-				-1.4
2,637,829	-				+0.4
2,637,836	-				-0.1
2,637,840	+				-1.6
2,637,886	-				-1.4
2,637,895	-				-0.1
2,637,913	+				-0.0
2,637,921	-				-0.4
2,637,934	+				-0.6
2,637,993	-				+0.3
2,637,993	-				-0.6
2,637,993	-				-0.2
2,638,008	+				-0.4
2,638,015	-				-2.2
2,638,015	-				+0.9
2,638,039	-				-0.1
2,638,049	+				+0.1
2,638,062	-				-1.9
2,638,081	+				-0.3
2,638,089	-				+1.1
2,638,089	-				+1.0
2,638,089	-				-1.7
2,638,112	+		GFF2616	0.14	+0.1
2,638,120	-		GFF2616	0.16	+0.7
2,638,131	+		GFF2616	0.18	+0.4
2,638,135	-		GFF2616	0.18	+0.8
2,638,139	-		GFF2616	0.19	-0.1
2,638,163	+		GFF2616	0.24	-0.2
2,638,173	+		GFF2616	0.26	+1.6
2,638,209	-		GFF2616	0.33	-0.5
2,638,245	-		GFF2616	0.39	-1.0
2,638,277	+		GFF2616	0.46	-0.1
2,638,286	+		GFF2616	0.47	+0.4
2,638,286	+		GFF2616	0.47	+1.0
2,638,286	+		GFF2616	0.47	-0.4
2,638,286	+		GFF2616	0.47	-0.8
2,638,286	+		GFF2616	0.47	+0.4
2,638,286	+		GFF2616	0.47	+0.3
2,638,286	+		GFF2616	0.47	+0.7
2,638,294	-		GFF2616	0.49	-0.8
2,638,294	-		GFF2616	0.49	-0.3
2,638,294	-		GFF2616	0.49	+0.1
2,638,294	-		GFF2616	0.49	-1.3
2,638,294	-		GFF2616	0.49	-0.1
2,638,331	-		GFF2616	0.56	-1.3
2,638,338	+		GFF2616	0.57	+2.1
2,638,349	+		GFF2616	0.59	-0.6
2,638,354	+		GFF2616	0.60	-0.1
2,638,354	+		GFF2616	0.60	+0.4
2,638,356	+		GFF2616	0.61	-0.4
2,638,356	+		GFF2616	0.61	+0.4
2,638,357	-		GFF2616	0.61	+0.3
2,638,362	-		GFF2616	0.62	+0.7
2,638,362	-		GFF2616	0.62	-0.6
2,638,364	-		GFF2616	0.62	+0.2
2,638,369	+		GFF2616	0.63	+0.2
2,638,377	-		GFF2616	0.65	-0.8
2,638,377	-		GFF2616	0.65	-1.3
2,638,377	-		GFF2616	0.65	-0.4
2,638,377	-		GFF2616	0.65	+0.7
2,638,379	+		GFF2616	0.65	+0.9
2,638,380	+		GFF2616	0.65	-0.1
2,638,387	-		GFF2616	0.66	+0.1
2,638,387	-		GFF2616	0.66	-0.1
2,638,387	-		GFF2616	0.66	+0.4
2,638,387	-		GFF2616	0.66	-0.7
2,638,394	-		GFF2616	0.68	+0.3
2,638,406	+		GFF2616	0.70	+0.3
2,638,424	+		GFF2616	0.74	-0.9
2,638,424	+		GFF2616	0.74	-0.4
2,638,478	+		GFF2616	0.84	+0.4
2,638,483	+		GFF2616	0.85	+1.5
2,638,489	+		GFF2616	0.86	-0.6
2,638,492	-		GFF2616	0.86	-0.2
2,638,494	+		GFF2616	0.87	-0.6
2,638,501	-		GFF2616	0.88	+0.7
2,638,502	-		GFF2616	0.88	+0.3
2,638,510	+				-1.0
2,638,518	-				-0.2
2,638,527	+				+0.9
2,638,557	+				-0.0
2,638,557	+				-1.9
2,638,557	+				+0.5
2,638,557	+				-1.3
2,638,565	-				-1.7
2,638,565	-				+0.1
2,638,567	-				+0.1
2,638,595	+				-1.2
2,638,600	+				+1.4
2,638,608	-				+0.1
2,638,613	+				-1.2
2,638,613	+				-2.5
2,638,613	+				+0.3
2,638,613	+				-1.0
2,638,613	+				+0.2
2,638,619	-				-1.1
2,638,621	-				-0.0
2,638,623	+				+0.4
2,638,635	-				-0.4
2,638,635	-				-2.7
2,638,641	-				-1.5
2,638,678	+				-0.1
2,638,707	+				+1.4
2,638,717	+				+0.4
2,638,729	-				+0.2
2,638,740	+		GFF2617	0.11	-1.4
2,638,748	-		GFF2617	0.12	-1.2
2,638,758	-		GFF2617	0.14	-1.1
2,638,762	+		GFF2617	0.14	-0.1
2,638,762	+		GFF2617	0.14	-0.3
2,638,762	+		GFF2617	0.14	-0.6
2,638,762	+		GFF2617	0.14	-1.3
2,638,762	+		GFF2617	0.14	-2.3
2,638,767	+		GFF2617	0.15	+0.1
2,638,767	+		GFF2617	0.15	-0.1
2,638,767	+		GFF2617	0.15	-0.1
2,638,768	-		GFF2617	0.15	-2.2
2,638,768	-		GFF2617	0.15	-1.4
2,638,769	+		GFF2617	0.15	-0.6
2,638,770	-		GFF2617	0.15	+1.2
2,638,770	-		GFF2617	0.15	+0.1
2,638,770	-		GFF2617	0.15	-0.2
2,638,770	-		GFF2617	0.15	-1.4
2,638,770	-		GFF2617	0.15	-0.1
2,638,770	-		GFF2617	0.15	+0.5
2,638,770	-		GFF2617	0.15	+0.5
2,638,770	-		GFF2617	0.15	-0.1
2,638,770	-		GFF2617	0.15	-2.7
2,638,770	-		GFF2617	0.15	-0.8
2,638,775	-		GFF2617	0.16	-0.4
2,638,777	-		GFF2617	0.16	-0.0
2,638,777	-		GFF2617	0.16	+0.0
2,638,797	-		GFF2617	0.19	-0.0
2,638,824	-		GFF2617	0.23	+1.9
2,638,829	-		GFF2617	0.24	+0.4
2,638,829	-		GFF2617	0.24	-0.7
2,638,837	+		GFF2617	0.25	-0.2
2,638,845	-		GFF2617	0.26	-0.6
2,638,851	+		GFF2617	0.27	-1.8
2,638,856	+		GFF2617	0.27	-0.2
2,638,866	+		GFF2617	0.29	+0.1
2,638,866	+		GFF2617	0.29	+0.5
2,638,866	+		GFF2617	0.29	+0.9
2,638,866	+		GFF2617	0.29	+0.5
2,638,866	+		GFF2617	0.29	-0.1
2,638,866	+		GFF2617	0.29	-0.3
2,638,874	-		GFF2617	0.30	-0.4
2,638,874	-		GFF2617	0.30	-1.5
2,638,874	-		GFF2617	0.30	-0.3
2,638,874	-		GFF2617	0.30	+0.5
2,638,874	-		GFF2617	0.30	-1.1
2,638,874	-		GFF2617	0.30	-0.3
2,638,874	-		GFF2617	0.30	-0.7
2,638,874	-		GFF2617	0.30	-0.4
2,638,875	+		GFF2617	0.30	-0.5
2,638,881	-		GFF2617	0.31	-2.0
2,638,882	+		GFF2617	0.31	+0.9
2,638,882	+		GFF2617	0.31	-0.2
2,638,916	+		GFF2617	0.36	-0.5
2,638,942	+		GFF2617	0.39	+0.7
2,638,957	+		GFF2617	0.42	-0.1
2,638,958	-		GFF2617	0.42	-1.1
2,638,976	+		GFF2617	0.44	+0.1
2,638,995	+		GFF2617	0.47	-1.9
2,639,008	+		GFF2617	0.49	-1.7
2,639,012	+		GFF2617	0.49	-0.4
2,639,064	+		GFF2617	0.56	-0.2
2,639,064	-		GFF2617	0.56	-1.1
2,639,067	-		GFF2617	0.57	-2.9
2,639,067	-		GFF2617	0.57	-2.2
2,639,069	+		GFF2617	0.57	+0.6
2,639,077	-		GFF2617	0.58	+1.0
2,639,077	-		GFF2617	0.58	+1.0
2,639,118	-		GFF2617	0.64	+1.5
2,639,124	+		GFF2617	0.65	-1.3
2,639,163	+		GFF2617	0.70	-0.3
2,639,179	+		GFF2617	0.73	-0.6
2,639,179	+		GFF2617	0.73	-0.3
2,639,183	+		GFF2617	0.73	-0.1
2,639,187	-		GFF2617	0.74	+0.3
2,639,190	+		GFF2617	0.74	-1.0
2,639,190	+		GFF2617	0.74	-0.3
2,639,191	-		GFF2617	0.74	-1.4
2,639,200	+		GFF2617	0.75	+1.7
2,639,200	+		GFF2617	0.75	-0.3
2,639,203	-		GFF2617	0.76	+1.1
2,639,206	-		GFF2617	0.76	-1.3
2,639,220	+		GFF2617	0.78	-0.2
2,639,221	+		GFF2617	0.78	+0.8
2,639,225	+		GFF2617	0.79	+0.3
2,639,229	-		GFF2617	0.79	+0.8
2,639,256	+		GFF2617	0.83	-1.1
2,639,256	+		GFF2617	0.83	+1.0
2,639,256	+		GFF2617	0.83	+0.9
2,639,256	+		GFF2617	0.83	-0.2
2,639,256	+		GFF2617	0.83	-0.5
2,639,256	+		GFF2617	0.83	+0.2
2,639,261	+		GFF2617	0.84	-0.3
2,639,261	+		GFF2617	0.84	-1.3
2,639,264	-		GFF2617	0.84	+0.4
2,639,264	-		GFF2617	0.84	-1.4
2,639,264	-		GFF2617	0.84	+1.2
2,639,264	-		GFF2617	0.84	+0.1
2,639,267	+		GFF2617	0.85	-0.1
2,639,268	+		GFF2617	0.85	-1.1
2,639,269	-		GFF2617	0.85	-0.3
2,639,269	-		GFF2617	0.85	-1.0
2,639,269	-		GFF2617	0.85	-2.0
2,639,276	-		GFF2617	0.86	+0.5
2,639,295	+		GFF2617	0.89	-0.1
2,639,298	-		GFF2617	0.89	+1.8
2,639,332	-				-0.1
2,639,347	-				-0.6
2,639,354	+				-0.0
2,639,354	+				-1.1
2,639,362	-				+0.4
2,639,362	-				+0.7
2,639,362	-				+0.1
2,639,370	+				-0.8
2,639,370	+				-0.9
2,639,388	+				-1.2
2,639,389	+				+0.0
2,639,389	+				-1.9
2,639,389	+				-0.3
2,639,389	+				-0.2
2,639,397	-				-0.3
2,639,397	-				+0.5
2,639,424	-				+1.1
2,639,469	+				+1.2
2,639,474	+				-2.0
2,639,488	+				-0.4
2,639,488	+				-2.1
2,639,488	+				+0.1
2,639,488	+				-1.0
2,639,490	-				+0.4
2,639,494	+				+0.1
2,639,494	+				+0.5
2,639,494	+				+0.2
2,639,496	-				-0.2
2,639,497	-				+0.3
2,639,507	-				-1.4
2,639,520	+				-0.5
2,639,523	-				-0.0
2,639,524	-				-1.3
2,639,546	-				+1.9
2,639,546	-				-1.7
2,639,568	+		GFF2618	0.11	-0.1
2,639,575	+		GFF2618	0.12	+0.7
2,639,604	+		GFF2618	0.17	-0.0
2,639,604	+		GFF2618	0.17	+0.3
2,639,604	+		GFF2618	0.17	-0.3
2,639,604	+		GFF2618	0.17	+0.0
2,639,612	-		GFF2618	0.18	-0.8
2,639,612	-		GFF2618	0.18	-1.9
2,639,642	+		GFF2618	0.23	+1.4
2,639,657	+		GFF2618	0.25	+0.5
2,639,657	+		GFF2618	0.25	-1.0
2,639,660	-		GFF2618	0.25	+0.0
2,639,665	-		GFF2618	0.26	-1.6
2,639,665	-		GFF2618	0.26	+0.2
2,639,697	+		GFF2618	0.31	+0.6
2,639,705	-		GFF2618	0.33	-0.9
2,639,705	-		GFF2618	0.33	-1.0
2,639,714	+		GFF2618	0.34	-0.7
2,639,714	+		GFF2618	0.34	-0.6
2,639,722	-		GFF2618	0.35	+0.0
2,639,723	+		GFF2618	0.35	-2.2
2,639,723	+		GFF2618	0.35	+0.8
2,639,723	+		GFF2618	0.35	-1.7
2,639,723	+		GFF2618	0.35	+0.8
2,639,731	-		GFF2618	0.37	+0.5
2,639,732	+		GFF2618	0.37	+1.3
2,639,740	-		GFF2618	0.38	-0.8
2,639,748	+		GFF2618	0.39	+0.5
2,639,758	-		GFF2618	0.41	-1.2
2,639,763	-		GFF2618	0.42	+0.8
2,639,770	+		GFF2618	0.43	+1.2
2,639,783	+		GFF2618	0.45	-2.0
2,639,788	+		GFF2618	0.46	-1.3
2,639,791	-		GFF2618	0.46	+1.1
2,639,791	-		GFF2618	0.46	-1.8
2,639,793	+		GFF2618	0.47	-0.3
2,639,795	+		GFF2618	0.47	-1.1
2,639,796	-		GFF2618	0.47	+0.0
2,639,832	-		GFF2618	0.53	+0.2
2,639,844	-		GFF2618	0.55	-0.7
2,639,847	+		GFF2618	0.55	+0.5
2,639,847	+		GFF2618	0.55	-0.5
2,639,848	+		GFF2618	0.55	+0.2
2,639,848	+		GFF2618	0.55	-2.3
2,639,848	+		GFF2618	0.55	+1.0
2,639,848	+		GFF2618	0.55	-0.1
2,639,856	-		GFF2618	0.57	+0.4
2,639,856	-		GFF2618	0.57	+1.2
2,639,856	-		GFF2618	0.57	-1.2
2,639,856	-		GFF2618	0.57	-1.2
2,639,856	-		GFF2618	0.57	+1.0
2,639,856	-		GFF2618	0.57	+0.3
2,639,856	-		GFF2618	0.57	-1.6
2,639,856	-		GFF2618	0.57	+0.2
2,639,860	+		GFF2618	0.57	-0.2
2,639,860	+		GFF2618	0.57	-0.8
2,639,860	+		GFF2618	0.57	-0.9
2,639,860	+		GFF2618	0.57	-0.8
2,639,865	+		GFF2618	0.58	+0.3
2,639,865	+		GFF2618	0.58	-1.0
2,639,868	-		GFF2618	0.58	-0.1
2,639,868	-		GFF2618	0.58	+1.3
2,639,873	-		GFF2618	0.59	+0.4
2,639,880	-		GFF2618	0.60	+0.4
2,639,896	+		GFF2618	0.63	-1.3
2,639,896	+		GFF2618	0.63	-2.0
2,639,896	+		GFF2618	0.63	+0.8
2,639,904	-		GFF2618	0.64	+0.1
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