Strain Fitness in Sphingobium sp. HT1-2 around GFF2573

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
2,587,511	-		GFF2571	0.49	+0.2
2,587,511	-		GFF2571	0.49	-1.1
2,587,511	-		GFF2571	0.49	-1.9
2,587,513	+		GFF2571	0.49	+0.1
2,587,513	-		GFF2571	0.49	-0.6
2,587,513	-		GFF2571	0.49	-0.6
2,587,513	-		GFF2571	0.49	+0.7
2,587,514	-		GFF2571	0.49	-2.2
2,587,521	-		GFF2571	0.50	-0.8
2,587,543	+		GFF2571	0.54	+1.2
2,587,545	+		GFF2571	0.54	-0.4
2,587,571	+		GFF2571	0.58	-1.0
2,587,571	+		GFF2571	0.58	+0.1
2,587,571	+		GFF2571	0.58	-0.3
2,587,571	+		GFF2571	0.58	-1.0
2,587,579	-		GFF2571	0.59	+1.3
2,587,579	-		GFF2571	0.59	+0.3
2,587,579	-		GFF2571	0.59	+1.9
2,587,579	-		GFF2571	0.59	-0.8
2,587,610	-		GFF2571	0.64	+0.2
2,587,620	+		GFF2571	0.66	-2.2
2,587,620	+		GFF2571	0.66	-2.4
2,587,623	+		GFF2571	0.66	+0.1
2,587,623	+		GFF2571	0.66	+0.0
2,587,630	-		GFF2571	0.67	-0.2
2,587,630	-		GFF2571	0.67	-0.3
2,587,631	-		GFF2571	0.68	+0.7
2,587,631	-		GFF2571	0.68	+0.6
2,587,631	-		GFF2571	0.68	-0.2
2,587,636	-		GFF2571	0.68	-1.2
2,587,661	-		GFF2571	0.72	+0.4
2,587,662	+		GFF2571	0.72	+0.3
2,587,665	-		GFF2571	0.73	+1.6
2,587,666	+		GFF2571	0.73	+0.9
2,587,690	+		GFF2571	0.77	-1.3
2,587,733	+		GFF2571	0.84	-0.1
2,587,757	-		GFF2571	0.87	+0.7
2,587,757	-		GFF2571	0.87	-1.9
2,587,766	+		GFF2571	0.89	+1.0
2,587,766	+		GFF2571	0.89	-0.6
2,587,776	+				-0.3
2,587,784	-				-0.5
2,587,786	+				-1.2
2,587,786	+				-2.1
2,587,797	+				-1.4
2,587,805	-				-2.0
2,587,805	-				+1.5
2,587,816	+				-0.3
2,587,843	-				+1.2
2,587,846	+				+1.2
2,587,856	+				+1.7
2,587,857	+				-0.9
2,587,865	-				-0.3
2,587,865	-				-2.7
2,587,871	-				-0.1
2,587,873	+				-0.4
2,587,898	-				+0.4
2,587,906	+				-0.5
2,587,920	+				+0.2
2,587,923	-				-0.3
2,587,923	-				-0.4
2,587,951	-				-1.0
2,587,959	+				-0.4
2,587,967	-				+0.8
2,587,969	+				-1.5
2,587,975	-				-1.3
2,587,975	-				-0.3
2,587,978	+		GFF2572	0.10	-0.3
2,587,981	-		GFF2572	0.11	-0.3
2,587,986	-		GFF2572	0.12	-0.1
2,587,986	-		GFF2572	0.12	-1.3
2,587,986	-		GFF2572	0.12	-0.5
2,587,986	-		GFF2572	0.12	-1.3
2,587,988	+		GFF2572	0.12	-0.6
2,588,010	+		GFF2572	0.15	-0.1
2,588,010	+		GFF2572	0.15	-0.4
2,588,010	+		GFF2572	0.15	-0.3
2,588,010	+		GFF2572	0.15	-0.6
2,588,010	+		GFF2572	0.15	-1.1
2,588,010	+		GFF2572	0.15	-0.2
2,588,010	+		GFF2572	0.15	-0.6
2,588,010	+		GFF2572	0.15	-1.1
2,588,010	+		GFF2572	0.15	-2.2
2,588,010	+		GFF2572	0.15	+0.4
2,588,010	+		GFF2572	0.15	-1.8
2,588,010	+		GFF2572	0.15	+0.3
2,588,010	+		GFF2572	0.15	-0.6
2,588,015	+		GFF2572	0.16	+0.2
2,588,018	-		GFF2572	0.17	-0.5
2,588,018	-		GFF2572	0.17	+0.1
2,588,018	-		GFF2572	0.17	-0.3
2,588,018	-		GFF2572	0.17	-0.1
2,588,018	-		GFF2572	0.17	-1.3
2,588,018	-		GFF2572	0.17	-0.1
2,588,018	-		GFF2572	0.17	-0.6
2,588,028	+		GFF2572	0.18	-1.1
2,588,030	+		GFF2572	0.19	+0.4
2,588,065	+		GFF2572	0.25	+1.2
2,588,086	+		GFF2572	0.28	+0.4
2,588,094	-		GFF2572	0.29	+0.0
2,588,094	-		GFF2572	0.29	-0.7
2,588,133	+		GFF2572	0.36	-0.6
2,588,134	+		GFF2572	0.36	-1.1
2,588,136	-		GFF2572	0.36	-2.2
2,588,142	-		GFF2572	0.38	-0.5
2,588,142	-		GFF2572	0.38	-0.6
2,588,144	-		GFF2572	0.38	-1.4
2,588,165	+		GFF2572	0.41	-0.1
2,588,165	+		GFF2572	0.41	-0.2
2,588,165	+		GFF2572	0.41	+0.9
2,588,177	-		GFF2572	0.43	+1.4
2,588,192	+		GFF2572	0.46	-1.1
2,588,192	+		GFF2572	0.46	-1.3
2,588,192	+		GFF2572	0.46	+1.4
2,588,197	+		GFF2572	0.47	+0.8
2,588,197	+		GFF2572	0.47	+0.2
2,588,200	-		GFF2572	0.47	-0.4
2,588,200	-		GFF2572	0.47	+0.9
2,588,205	-		GFF2572	0.48	-1.1
2,588,205	-		GFF2572	0.48	+0.0
2,588,217	+		GFF2572	0.50	+0.6
2,588,219	-		GFF2572	0.50	+0.8
2,588,232	+		GFF2572	0.53	-1.1
2,588,233	+		GFF2572	0.53	-1.8
2,588,240	-		GFF2572	0.54	-1.3
2,588,240	-		GFF2572	0.54	-0.2
2,588,240	-		GFF2572	0.54	-1.0
2,588,246	-		GFF2572	0.55	-0.4
2,588,251	+		GFF2572	0.56	+0.1
2,588,254	-		GFF2572	0.56	-0.8
2,588,295	+		GFF2572	0.63	-0.6
2,588,297	-		GFF2572	0.63	+0.1
2,588,300	+		GFF2572	0.64	-0.4
2,588,300	+		GFF2572	0.64	-1.0
2,588,300	+		GFF2572	0.64	-0.5
2,588,300	+		GFF2572	0.64	+0.8
2,588,300	+		GFF2572	0.64	+1.2
2,588,300	+		GFF2572	0.64	-2.2
2,588,300	+		GFF2572	0.64	-0.8
2,588,302	+		GFF2572	0.64	-0.9
2,588,302	+		GFF2572	0.64	+1.2
2,588,302	+		GFF2572	0.64	+1.2
2,588,302	+		GFF2572	0.64	-0.9
2,588,302	+		GFF2572	0.64	-2.2
2,588,302	+		GFF2572	0.64	+0.2
2,588,302	+		GFF2572	0.64	+1.6
2,588,302	+		GFF2572	0.64	+0.4
2,588,302	+		GFF2572	0.64	-0.4
2,588,302	+		GFF2572	0.64	+0.3
2,588,302	+		GFF2572	0.64	-0.4
2,588,302	+		GFF2572	0.64	-0.9
2,588,302	+		GFF2572	0.64	-0.1
2,588,302	+		GFF2572	0.64	-0.2
2,588,302	+		GFF2572	0.64	-0.4
2,588,303	-		GFF2572	0.64	-2.3
2,588,308	-		GFF2572	0.65	-0.5
2,588,308	-		GFF2572	0.65	-1.4
2,588,308	-		GFF2572	0.65	+0.8
2,588,308	-		GFF2572	0.65	+0.3
2,588,308	-		GFF2572	0.65	+0.7
2,588,308	-		GFF2572	0.65	+0.5
2,588,308	-		GFF2572	0.65	+0.4
2,588,308	-		GFF2572	0.65	-2.2
2,588,308	-		GFF2572	0.65	-0.0
2,588,308	-		GFF2572	0.65	-2.4
2,588,310	-		GFF2572	0.66	-0.3
2,588,310	-		GFF2572	0.66	+0.0
2,588,310	-		GFF2572	0.66	+0.4
2,588,310	-		GFF2572	0.66	-2.0
2,588,310	-		GFF2572	0.66	-0.3
2,588,310	-		GFF2572	0.66	-0.0
2,588,310	-		GFF2572	0.66	-0.4
2,588,310	-		GFF2572	0.66	-0.2
2,588,310	-		GFF2572	0.66	-1.1
2,588,310	-		GFF2572	0.66	-0.7
2,588,310	-		GFF2572	0.66	-0.8
2,588,310	-		GFF2572	0.66	+1.2
2,588,310	-		GFF2572	0.66	-0.6
2,588,310	-		GFF2572	0.66	+0.1
2,588,310	-		GFF2572	0.66	+0.7
2,588,310	-		GFF2572	0.66	+0.2
2,588,310	-		GFF2572	0.66	-1.1
2,588,310	-		GFF2572	0.66	-1.7
2,588,310	-		GFF2572	0.66	-1.0
2,588,310	-		GFF2572	0.66	+0.6
2,588,310	-		GFF2572	0.66	-1.5
2,588,310	-		GFF2572	0.66	-0.9
2,588,310	-		GFF2572	0.66	-0.9
2,588,310	-		GFF2572	0.66	+0.5
2,588,319	+		GFF2572	0.67	+0.8
2,588,334	+		GFF2572	0.69	-0.2
2,588,342	-		GFF2572	0.71	-0.0
2,588,344	+		GFF2572	0.71	-0.5
2,588,352	-		GFF2572	0.72	-1.1
2,588,356	+		GFF2572	0.73	-1.4
2,588,382	+		GFF2572	0.78	+0.6
2,588,384	+		GFF2572	0.78	-0.3
2,588,391	-		GFF2572	0.79	+0.5
2,588,416	-		GFF2572	0.83	+0.5
2,588,416	-		GFF2572	0.83	-1.1
2,588,416	-		GFF2572	0.83	+0.6
2,588,444	+		GFF2572	0.88	+0.5
2,588,444	+		GFF2572	0.88	-1.1
2,588,452	-		GFF2572	0.89	+0.4
2,588,452	-		GFF2572	0.89	+0.6
2,588,452	-		GFF2572	0.89	+0.9
2,588,457	-				-0.1
2,588,457	-				-1.4
2,588,463	-				+1.9
2,588,467	-				-2.1
2,588,467	-				-0.4
2,588,485	+				-0.2
2,588,526	+				+0.2
2,588,535	-				-0.8
2,588,578	+				-0.2
2,588,608	+		GFF2573	0.13	-1.4
2,588,609	+		GFF2573	0.13	-0.1
2,588,618	+		GFF2573	0.14	-1.8
2,588,618	+		GFF2573	0.14	-1.4
2,588,619	+		GFF2573	0.14	+0.7
2,588,626	-		GFF2573	0.15	-1.0
2,588,628	+		GFF2573	0.16	+0.5
2,588,628	+		GFF2573	0.16	-2.7
2,588,628	+		GFF2573	0.16	-0.1
2,588,628	+		GFF2573	0.16	-1.7
2,588,628	+		GFF2573	0.16	+0.1
2,588,628	+		GFF2573	0.16	-0.1
2,588,628	+		GFF2573	0.16	+0.7
2,588,636	-		GFF2573	0.17	-0.0
2,588,636	-		GFF2573	0.17	-0.4
2,588,636	-		GFF2573	0.17	+0.6
2,588,636	-		GFF2573	0.17	-0.4
2,588,636	-		GFF2573	0.17	+0.2
2,588,636	-		GFF2573	0.17	-2.6
2,588,636	-		GFF2573	0.17	+2.0
2,588,640	+		GFF2573	0.17	+0.7
2,588,640	+		GFF2573	0.17	-2.0
2,588,640	+		GFF2573	0.17	-1.5
2,588,640	+		GFF2573	0.17	-0.6
2,588,640	+		GFF2573	0.17	-0.8
2,588,641	+		GFF2573	0.17	-2.0
2,588,641	+		GFF2573	0.17	-2.9
2,588,641	+		GFF2573	0.17	-1.2
2,588,641	+		GFF2573	0.17	-0.3
2,588,648	-		GFF2573	0.18	-0.5
2,588,648	-		GFF2573	0.18	-0.1
2,588,649	-		GFF2573	0.18	-0.6
2,588,649	-		GFF2573	0.18	-1.8
2,588,649	-		GFF2573	0.18	-1.6
2,588,649	-		GFF2573	0.18	-1.0
2,588,649	-		GFF2573	0.18	-0.1
2,588,649	-		GFF2573	0.18	-1.0
2,588,649	-		GFF2573	0.18	+0.3
2,588,649	-		GFF2573	0.18	+0.1
2,588,649	-		GFF2573	0.18	-1.7
2,588,665	+		GFF2573	0.20	-0.5
2,588,671	+		GFF2573	0.21	+0.3
2,588,673	-		GFF2573	0.22	+0.2
2,588,690	-		GFF2573	0.24	+1.0
2,588,695	-		GFF2573	0.24	+0.0
2,588,699	+		GFF2573	0.25	-0.5
2,588,716	+		GFF2573	0.27	+0.4
2,588,716	+		GFF2573	0.27	+0.6
2,588,716	+		GFF2573	0.27	-0.0
2,588,716	+		GFF2573	0.27	-2.2
2,588,717	-		GFF2573	0.27	-1.0
2,588,724	-		GFF2573	0.28	+0.9
2,588,724	-		GFF2573	0.28	-0.2
2,588,728	+		GFF2573	0.29	-0.2
2,588,741	+		GFF2573	0.30	-2.0
2,588,741	+		GFF2573	0.30	-1.3
2,588,759	-		GFF2573	0.33	+1.2
2,588,763	+		GFF2573	0.33	-0.2
2,588,766	-		GFF2573	0.34	-0.5
2,588,780	+		GFF2573	0.36	-1.6
2,588,786	+		GFF2573	0.36	+0.4
2,588,786	+		GFF2573	0.36	-0.3
2,588,786	+		GFF2573	0.36	+0.0
2,588,786	+		GFF2573	0.36	-0.3
2,588,786	+		GFF2573	0.36	-0.1
2,588,786	+		GFF2573	0.36	-0.1
2,588,794	-		GFF2573	0.37	-1.2
2,588,794	-		GFF2573	0.37	+0.3
2,588,794	-		GFF2573	0.37	-1.1
2,588,794	-		GFF2573	0.37	-1.3
2,588,794	-		GFF2573	0.37	-0.2
2,588,794	-		GFF2573	0.37	-1.5
2,588,794	-		GFF2573	0.37	-1.2
2,588,794	-		GFF2573	0.37	+1.4
2,588,794	-		GFF2573	0.37	-2.1
2,588,794	-		GFF2573	0.37	-1.7
2,588,794	-		GFF2573	0.37	-2.3
2,588,794	-		GFF2573	0.37	-1.0
2,588,794	-		GFF2573	0.37	-0.1
2,588,794	-		GFF2573	0.37	-0.0
2,588,794	-		GFF2573	0.37	-0.6
2,588,794	-		GFF2573	0.37	-0.8
2,588,796	+		GFF2573	0.38	-0.2
2,588,796	+		GFF2573	0.38	-1.1
2,588,796	+		GFF2573	0.38	-1.1
2,588,796	+		GFF2573	0.38	-1.0
2,588,796	+		GFF2573	0.38	-2.2
2,588,796	+		GFF2573	0.38	+0.3
2,588,796	+		GFF2573	0.38	-0.4
2,588,799	+		GFF2573	0.38	+0.2
2,588,804	-		GFF2573	0.39	+0.4
2,588,804	-		GFF2573	0.39	+0.1
2,588,833	+		GFF2573	0.43	+0.2
2,588,879	-		GFF2573	0.49	-0.3
2,588,908	+		GFF2573	0.52	+0.6
2,588,925	+		GFF2573	0.55	-0.1
2,588,925	+		GFF2573	0.55	-0.4
2,588,938	+		GFF2573	0.56	-1.8
2,588,953	-		GFF2573	0.58	-1.5
2,588,964	-		GFF2573	0.60	-0.5
2,588,964	-		GFF2573	0.60	+0.9
2,588,965	+		GFF2573	0.60	+1.1
2,588,981	+		GFF2573	0.62	-1.3
2,588,982	+		GFF2573	0.62	-0.1
2,588,991	+		GFF2573	0.63	-1.8
2,589,006	+		GFF2573	0.65	-0.6
2,589,011	-		GFF2573	0.66	-0.9
2,589,016	-		GFF2573	0.67	-0.7
2,589,018	+		GFF2573	0.67	+1.6
2,589,023	+		GFF2573	0.67	-1.4
2,589,028	+		GFF2573	0.68	-0.1
2,589,045	-		GFF2573	0.70	+0.2
2,589,045	-		GFF2573	0.70	-1.5
2,589,045	-		GFF2573	0.70	+0.7
2,589,045	-		GFF2573	0.70	-0.1
2,589,049	+		GFF2573	0.71	-1.7
2,589,100	+		GFF2573	0.78	-0.4
2,589,108	-		GFF2573	0.79	+0.6
2,589,110	+		GFF2573	0.79	-0.0
2,589,111	+		GFF2573	0.79	-1.2
2,589,111	+		GFF2573	0.79	-2.2
2,589,118	-		GFF2573	0.80	-0.0
2,589,119	-		GFF2573	0.80	+0.4
2,589,126	+		GFF2573	0.81	-1.0
2,589,139	-		GFF2573	0.83	-2.1
2,589,168	+		GFF2573	0.86	-1.6
2,589,176	+		GFF2573	0.88	-0.4
2,589,184	-		GFF2573	0.89	+1.1
2,589,194	+				+0.3
2,589,210	+				-2.9
2,589,218	-				-0.6
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