Strain Fitness in Sphingobium sp. HT1-2 around GFF2495

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
2,513,829	+				-0.2
2,513,837	-				-0.9
2,513,837	-				+1.1
2,513,881	+				-0.5
2,513,883	-				+0.3
2,513,887	-				+1.8
2,513,893	+				-0.7
2,513,893	+				+0.3
2,513,917	+		GFF2493	0.17	-0.8
2,513,917	+		GFF2493	0.17	-0.3
2,513,917	+		GFF2493	0.17	+0.9
2,513,917	+		GFF2493	0.17	+0.5
2,513,925	-		GFF2493	0.19	+0.5
2,513,925	-		GFF2493	0.19	+1.5
2,513,925	-		GFF2493	0.19	+0.1
2,513,925	-		GFF2493	0.19	-1.0
2,513,925	-		GFF2493	0.19	+1.4
2,513,925	-		GFF2493	0.19	-1.2
2,513,925	-		GFF2493	0.19	-0.5
2,513,964	+		GFF2493	0.32	+1.0
2,513,965	+		GFF2493	0.32	+1.3
2,513,965	+		GFF2493	0.32	+0.1
2,513,973	-		GFF2493	0.35	-0.5
2,513,973	-		GFF2493	0.35	+0.3
2,513,973	-		GFF2493	0.35	+0.7
2,513,973	-		GFF2493	0.35	-0.0
2,514,234	-				-0.9
2,514,243	+				-0.8
2,514,251	-				+0.5
2,514,251	-				-0.7
2,514,279	+		GFF2494	0.11	-1.1
2,514,285	+		GFF2494	0.12	+0.3
2,514,291	+		GFF2494	0.13	-0.2
2,514,308	+		GFF2494	0.17	-0.5
2,514,316	-		GFF2494	0.18	-1.5
2,514,316	-		GFF2494	0.18	-0.1
2,514,317	+		GFF2494	0.18	+0.4
2,514,317	+		GFF2494	0.18	-1.2
2,514,317	+		GFF2494	0.18	+0.9
2,514,317	+		GFF2494	0.18	-0.5
2,514,325	-		GFF2494	0.20	-1.1
2,514,330	-		GFF2494	0.21	-1.9
2,514,336	-		GFF2494	0.22	-1.2
2,514,356	+		GFF2494	0.25	-0.4
2,514,356	+		GFF2494	0.25	-2.0
2,514,356	+		GFF2494	0.25	-0.8
2,514,356	+		GFF2494	0.25	-1.9
2,514,356	+		GFF2494	0.25	-1.8
2,514,356	+		GFF2494	0.25	-0.2
2,514,356	+		GFF2494	0.25	+0.3
2,514,361	+		GFF2494	0.26	+1.6
2,514,364	-		GFF2494	0.27	+0.4
2,514,364	-		GFF2494	0.27	+0.3
2,514,364	-		GFF2494	0.27	-2.6
2,514,364	-		GFF2494	0.27	+1.1
2,514,366	+		GFF2494	0.27	+0.1
2,514,366	+		GFF2494	0.27	-1.2
2,514,366	+		GFF2494	0.27	+0.1
2,514,374	-		GFF2494	0.29	-1.2
2,514,374	-		GFF2494	0.29	+0.0
2,514,374	-		GFF2494	0.29	-0.4
2,514,374	-		GFF2494	0.29	+0.6
2,514,374	-		GFF2494	0.29	+0.3
2,514,379	-		GFF2494	0.30	+1.0
2,514,419	+		GFF2494	0.37	+1.1
2,514,422	-		GFF2494	0.37	-1.7
2,514,422	-		GFF2494	0.37	-0.1
2,514,422	-		GFF2494	0.37	-1.4
2,514,424	+		GFF2494	0.38	-0.4
2,514,424	+		GFF2494	0.38	-0.6
2,514,424	+		GFF2494	0.38	-1.5
2,514,424	+		GFF2494	0.38	-0.4
2,514,427	-		GFF2494	0.38	-0.6
2,514,432	-		GFF2494	0.39	-0.1
2,514,432	-		GFF2494	0.39	+1.0
2,514,432	-		GFF2494	0.39	-0.4
2,514,432	-		GFF2494	0.39	-1.2
2,514,432	-		GFF2494	0.39	-0.4
2,514,461	+		GFF2494	0.44	+0.6
2,514,464	-		GFF2494	0.45	-0.1
2,514,479	+		GFF2494	0.48	-1.3
2,514,479	+		GFF2494	0.48	-0.4
2,514,479	+		GFF2494	0.48	-1.2
2,514,479	+		GFF2494	0.48	-0.0
2,514,479	+		GFF2494	0.48	+0.8
2,514,479	+		GFF2494	0.48	+0.9
2,514,479	+		GFF2494	0.48	-1.4
2,514,479	+		GFF2494	0.48	+0.7
2,514,484	+		GFF2494	0.49	-2.2
2,514,485	-		GFF2494	0.49	-0.6
2,514,487	-		GFF2494	0.49	+0.7
2,514,487	-		GFF2494	0.49	-0.4
2,514,487	-		GFF2494	0.49	-0.1
2,514,487	-		GFF2494	0.49	+0.5
2,514,487	-		GFF2494	0.49	+0.4
2,514,487	-		GFF2494	0.49	-0.4
2,514,495	-		GFF2494	0.51	-3.1
2,514,510	+		GFF2494	0.53	+1.0
2,514,518	-		GFF2494	0.55	-0.1
2,514,537	-		GFF2494	0.58	-1.4
2,514,544	+		GFF2494	0.60	-1.2
2,514,544	+		GFF2494	0.60	-0.6
2,514,552	-		GFF2494	0.61	-1.2
2,514,552	-		GFF2494	0.61	+1.0
2,514,552	-		GFF2494	0.61	-1.0
2,514,552	-		GFF2494	0.61	-0.5
2,514,558	+		GFF2494	0.62	-1.1
2,514,560	+		GFF2494	0.62	+0.5
2,514,566	-		GFF2494	0.64	-0.1
2,514,566	-		GFF2494	0.64	-0.2
2,514,566	-		GFF2494	0.64	-0.5
2,514,572	+		GFF2494	0.65	-1.2
2,514,575	-		GFF2494	0.65	+0.0
2,514,589	+		GFF2494	0.68	-0.2
2,514,597	-		GFF2494	0.69	-1.4
2,514,618	+		GFF2494	0.73	+0.3
2,514,618	+		GFF2494	0.73	+0.4
2,514,626	-		GFF2494	0.74	-1.3
2,514,626	-		GFF2494	0.74	+0.6
2,514,626	-		GFF2494	0.74	+0.1
2,514,635	-		GFF2494	0.76	-0.2
2,514,640	-		GFF2494	0.77	-2.0
2,514,657	+		GFF2494	0.80	+1.4
2,514,657	+		GFF2494	0.80	-0.8
2,514,675	-		GFF2494	0.83	-2.1
2,514,702	+		GFF2494	0.88	-0.3
2,514,702	+		GFF2494	0.88	-0.7
2,514,736	+				-0.0
2,514,736	+				+0.6
2,514,736	+				+0.1
2,514,744	-				-0.3
2,514,774	-				+0.8
2,514,779	-				+0.1
2,514,784	-				-1.4
2,514,784	-				+0.8
2,514,784	-				-2.9
2,514,784	-				-1.1
2,514,815	+				+0.5
2,514,895	-				-1.0
2,514,904	-				-1.7
2,514,906	+				+0.6
2,514,909	+				+1.4
2,514,915	+				-1.2
2,514,915	+				-0.5
2,514,917	-				+0.4
2,514,917	-				-0.6
2,514,923	-				+0.9
2,514,923	-				+0.1
2,514,981	+				+0.9
2,515,005	-				+0.9
2,515,005	-				-0.8
2,515,005	-				+0.4
2,515,021	+				-0.7
2,515,042	+				+0.3
2,515,055	-				-1.4
2,515,065	+				-0.1
2,515,075	+				-0.5
2,515,082	-				+1.1
2,515,138	-		GFF2495	0.11	-0.5
2,515,165	-		GFF2495	0.12	+0.0
2,515,174	-		GFF2495	0.13	-2.3
2,515,184	-		GFF2495	0.13	+0.3
2,515,212	-		GFF2495	0.14	-2.4
2,515,212	-		GFF2495	0.14	+0.1
2,515,268	-		GFF2495	0.16	-0.1
2,515,288	-		GFF2495	0.16	-1.2
2,515,312	-		GFF2495	0.17	+0.6
2,515,313	-		GFF2495	0.17	-1.9
2,515,314	+		GFF2495	0.17	-1.1
2,515,314	+		GFF2495	0.17	+0.1
2,515,317	-		GFF2495	0.17	+0.5
2,515,325	+		GFF2495	0.17	-0.5
2,515,325	+		GFF2495	0.17	-1.0
2,515,343	+		GFF2495	0.18	+0.8
2,515,343	+		GFF2495	0.18	+0.1
2,515,421	-		GFF2495	0.21	+0.1
2,515,423	+		GFF2495	0.21	-1.3
2,515,423	+		GFF2495	0.21	+0.3
2,515,423	+		GFF2495	0.21	-0.4
2,515,431	-		GFF2495	0.21	-0.8
2,515,431	-		GFF2495	0.21	-1.3
2,515,431	-		GFF2495	0.21	-0.2
2,515,437	-		GFF2495	0.21	-2.7
2,515,438	-		GFF2495	0.21	-0.4
2,515,445	-		GFF2495	0.21	+0.1
2,515,465	+		GFF2495	0.22	+0.2
2,515,470	+		GFF2495	0.22	-0.8
2,515,470	+		GFF2495	0.22	-0.7
2,515,470	+		GFF2495	0.22	+0.7
2,515,470	+		GFF2495	0.22	+0.1
2,515,478	-		GFF2495	0.22	-0.1
2,515,478	-		GFF2495	0.22	-0.5
2,515,478	-		GFF2495	0.22	+0.5
2,515,478	-		GFF2495	0.22	+0.4
2,515,478	-		GFF2495	0.22	-0.9
2,515,478	-		GFF2495	0.22	-1.1
2,515,485	+		GFF2495	0.23	-0.3
2,515,491	-		GFF2495	0.23	-0.6
2,515,493	-		GFF2495	0.23	+0.7
2,515,531	+		GFF2495	0.24	+0.7
2,515,532	+		GFF2495	0.24	-1.5
2,515,540	-		GFF2495	0.24	+0.3
2,515,546	+		GFF2495	0.25	-0.6
2,515,578	+		GFF2495	0.26	-0.7
2,515,578	+		GFF2495	0.26	-0.2
2,515,578	+		GFF2495	0.26	-2.0
2,515,586	-		GFF2495	0.26	-1.9
2,515,586	-		GFF2495	0.26	+0.4
2,515,586	-		GFF2495	0.26	-0.7
2,515,586	-		GFF2495	0.26	-1.3
2,515,588	+		GFF2495	0.26	-1.2
2,515,588	+		GFF2495	0.26	-1.3
2,515,625	+		GFF2495	0.27	-0.5
2,515,625	+		GFF2495	0.27	+1.1
2,515,627	-		GFF2495	0.27	+0.8
2,515,633	-		GFF2495	0.27	+0.5
2,515,633	-		GFF2495	0.27	-1.1
2,515,659	+		GFF2495	0.28	-0.9
2,515,667	-		GFF2495	0.28	-1.5
2,515,669	-		GFF2495	0.29	-0.0
2,515,675	-		GFF2495	0.29	+0.5
2,515,687	+		GFF2495	0.29	-0.7
2,515,691	-		GFF2495	0.29	+0.3
2,515,693	+		GFF2495	0.29	+0.1
2,515,707	+		GFF2495	0.30	-2.1
2,515,715	-		GFF2495	0.30	-0.0
2,515,715	-		GFF2495	0.30	-1.3
2,515,752	+		GFF2495	0.31	-0.5
2,515,755	-		GFF2495	0.31	-1.7
2,515,765	-		GFF2495	0.32	+0.5
2,515,801	-		GFF2495	0.33	-0.1
2,515,802	+		GFF2495	0.33	+0.8
2,515,810	-		GFF2495	0.33	-1.0
2,515,812	+		GFF2495	0.33	-0.2
2,515,812	+		GFF2495	0.33	-0.4
2,515,812	+		GFF2495	0.33	-0.1
2,515,812	+		GFF2495	0.33	-1.3
2,515,812	+		GFF2495	0.33	+1.7
2,515,820	-		GFF2495	0.33	+0.2
2,515,820	-		GFF2495	0.33	+1.0
2,515,820	-		GFF2495	0.33	+0.7
2,515,866	+		GFF2495	0.35	-1.3
2,515,866	-		GFF2495	0.35	-1.1
2,515,872	+		GFF2495	0.35	-1.5
2,515,873	+		GFF2495	0.35	-0.0
2,515,885	-		GFF2495	0.35	+0.2
2,515,890	-		GFF2495	0.36	-1.6
2,515,890	-		GFF2495	0.36	-1.1
2,515,895	-		GFF2495	0.36	+0.7
2,515,895	-		GFF2495	0.36	-0.3
2,515,918	+		GFF2495	0.37	+1.0
2,515,918	+		GFF2495	0.37	+1.1
2,515,918	+		GFF2495	0.37	-1.6
2,515,918	+		GFF2495	0.37	+1.6
2,515,918	+		GFF2495	0.37	+0.5
2,515,918	+		GFF2495	0.37	-2.1
2,515,926	-		GFF2495	0.37	+0.4
2,515,926	-		GFF2495	0.37	-2.4
2,515,926	-		GFF2495	0.37	+0.5
2,515,926	-		GFF2495	0.37	+0.3
2,515,926	-		GFF2495	0.37	-1.5
2,515,926	-		GFF2495	0.37	-2.0
2,515,926	-		GFF2495	0.37	-0.8
2,515,995	-		GFF2495	0.39	-0.4
2,516,019	-		GFF2495	0.40	+1.3
2,516,019	-		GFF2495	0.40	-0.1
2,516,029	-		GFF2495	0.40	-1.1
2,516,038	+		GFF2495	0.40	-1.2
2,516,046	-		GFF2495	0.41	+1.0
2,516,064	-		GFF2495	0.41	-1.8
2,516,072	+		GFF2495	0.41	+1.2
2,516,082	+		GFF2495	0.42	-1.8
2,516,122	-		GFF2495	0.43	-0.6
2,516,122	-		GFF2495	0.43	-1.1
2,516,122	-		GFF2495	0.43	-2.3
2,516,122	-		GFF2495	0.43	-0.5
2,516,134	+		GFF2495	0.43	+0.4
2,516,142	-		GFF2495	0.44	+0.2
2,516,142	-		GFF2495	0.44	-1.7
2,516,152	+		GFF2495	0.44	-0.0
2,516,152	+		GFF2495	0.44	+0.5
2,516,157	+		GFF2495	0.44	+1.0
2,516,182	+		GFF2495	0.45	+0.1
2,516,188	+		GFF2495	0.45	-2.3
2,516,196	-		GFF2495	0.45	+0.3
2,516,207	-		GFF2495	0.46	-1.5
2,516,209	+		GFF2495	0.46	-2.1
2,516,209	+		GFF2495	0.46	-0.1
2,516,209	+		GFF2495	0.46	-1.2
2,516,217	-		GFF2495	0.46	-0.9
2,516,234	+		GFF2495	0.47	+1.2
2,516,234	+		GFF2495	0.47	-0.1
2,516,242	-		GFF2495	0.47	-0.6
2,516,242	-		GFF2495	0.47	+0.4
2,516,260	+		GFF2495	0.48	-0.1
2,516,276	-		GFF2495	0.48	-0.2
2,516,330	+		GFF2495	0.50	+1.4
2,516,330	-		GFF2495	0.50	-1.2
2,516,337	-		GFF2495	0.50	-0.2
2,516,338	-		GFF2495	0.50	-0.6
2,516,355	-		GFF2495	0.51	-0.9
2,516,361	-		GFF2495	0.51	+0.1
2,516,411	+		GFF2495	0.52	-1.0
2,516,414	+		GFF2495	0.52	-1.1
2,516,414	+		GFF2495	0.52	+0.2
2,516,422	-		GFF2495	0.53	+0.3
2,516,422	-		GFF2495	0.53	-0.6
2,516,424	+		GFF2495	0.53	-0.6
2,516,424	+		GFF2495	0.53	-1.2
2,516,424	+		GFF2495	0.53	+0.7
2,516,424	+		GFF2495	0.53	-0.8
2,516,424	+		GFF2495	0.53	+0.8
2,516,424	+		GFF2495	0.53	+0.0
2,516,432	-		GFF2495	0.53	-0.4
2,516,432	-		GFF2495	0.53	-1.7
2,516,432	-		GFF2495	0.53	-0.6
2,516,432	-		GFF2495	0.53	-0.1
2,516,432	-		GFF2495	0.53	-1.0
2,516,432	-		GFF2495	0.53	-0.6
2,516,432	-		GFF2495	0.53	-1.7
2,516,432	-		GFF2495	0.53	+0.5
2,516,432	-		GFF2495	0.53	-0.4
2,516,432	-		GFF2495	0.53	-0.1
2,516,434	+		GFF2495	0.53	-0.3
2,516,442	+		GFF2495	0.53	+0.8
2,516,450	-		GFF2495	0.54	+2.0
2,516,457	-		GFF2495	0.54	-0.1
2,516,457	-		GFF2495	0.54	-0.3
2,516,466	-		GFF2495	0.54	-1.4
2,516,512	+		GFF2495	0.56	+0.7
2,516,519	-		GFF2495	0.56	-1.1
2,516,537	+		GFF2495	0.56	-0.8
2,516,539	-		GFF2495	0.57	-0.1
2,516,544	-		GFF2495	0.57	+1.1
2,516,547	+		GFF2495	0.57	-0.2
2,516,548	+		GFF2495	0.57	-0.2
2,516,575	+		GFF2495	0.58	-0.3
2,516,576	+		GFF2495	0.58	-0.2
2,516,579	-		GFF2495	0.58	-0.6
2,516,584	-		GFF2495	0.58	-0.7
2,516,584	-		GFF2495	0.58	+0.3
2,516,621	-		GFF2495	0.59	-0.1
2,516,628	+		GFF2495	0.59	-1.9
2,516,641	-		GFF2495	0.60	-0.3
2,516,641	-		GFF2495	0.60	-1.3
2,516,646	-		GFF2495	0.60	-0.3
2,516,648	+		GFF2495	0.60	-1.1
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2,516,781	+		GFF2495	0.64	-1.6
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2,516,956	-		GFF2495	0.70	-1.9
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2,517,182	-		GFF2495	0.77	-0.1
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2,517,590	-				+0.1
2,517,599	+				+0.9
2,517,619	-				-1.3
2,517,641	+				-1.5
2,517,645	+				+0.1
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2,517,652	+				+1.8
2,517,652	+				-2.2
2,517,661	+				-0.6
2,517,664	+				-0.9
2,517,709	+				+0.8
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2,517,733	+				-1.6
2,517,733	+				-0.1
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2,517,733	+				-1.1
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2,517,741	-				-0.3
2,517,741	-				+0.4
2,517,741	-				-0.9
2,517,742	-				-0.3
2,517,742	-				+0.3
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2,517,795	+				-0.8
2,517,795	+				-1.7
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2,517,834	-				-1.8
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