Strain Fitness in Sphingobium sp. HT1-2 around GFF2369

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
2,390,480	+				-0.3
2,390,483	-				-0.0
2,390,488	-				+0.8
2,390,490	+				+0.9
2,390,494	-				+0.8
2,390,494	-				-0.8
2,390,498	-				-0.3
2,390,498	-				-0.2
2,390,513	-				+1.2
2,390,529	-				+0.4
2,390,538	-				-0.4
2,391,254	+				-0.9
2,391,254	+				-0.9
2,391,262	-				+0.8
2,391,307	-				-0.2
2,391,313	-				-1.1
2,391,338	-				+0.0
2,391,396	-				-0.4
2,391,396	-				-0.2
2,391,440	-				+0.6
2,391,466	-				+0.1
2,391,468	-				-2.3
2,391,594	-				-1.1
2,391,594	-				-1.9
2,391,594	-				-2.4
2,391,615	+				-1.0
2,391,623	+				-2.9
2,391,651	+				-1.0
2,391,651	+				-1.2
2,391,726	+		GFF2369	0.13	-0.7
2,391,726	+		GFF2369	0.13	+0.1
2,391,734	-		GFF2369	0.14	-1.4
2,391,753	+		GFF2369	0.15	-1.5
2,391,821	+		GFF2369	0.18	-1.4
2,391,895	+		GFF2369	0.22	-0.9
2,391,903	-		GFF2369	0.23	-2.5
2,391,967	+		GFF2369	0.26	-1.2
2,391,983	+		GFF2369	0.27	-0.2
2,392,007	+		GFF2369	0.28	-3.3
2,392,012	+		GFF2369	0.28	-1.1
2,392,012	+		GFF2369	0.28	-1.2
2,392,017	+		GFF2369	0.28	-0.4
2,392,017	+		GFF2369	0.28	+1.4
2,392,017	+		GFF2369	0.28	+1.6
2,392,017	+		GFF2369	0.28	-0.8
2,392,058	-		GFF2369	0.31	-1.2
2,392,104	-		GFF2369	0.33	-2.1
2,392,143	+		GFF2369	0.35	-1.5
2,392,154	+		GFF2369	0.35	-0.8
2,392,154	+		GFF2369	0.35	+0.2
2,392,154	+		GFF2369	0.35	-1.8
2,392,162	-		GFF2369	0.36	-2.6
2,392,289	+		GFF2369	0.42	-2.0
2,392,294	+		GFF2369	0.43	-1.0
2,392,344	+		GFF2369	0.45	-0.1
2,392,344	+		GFF2369	0.45	+0.2
2,392,344	+		GFF2369	0.45	-1.9
2,392,352	-		GFF2369	0.46	-1.2
2,392,352	-		GFF2369	0.46	-0.9
2,392,388	-		GFF2369	0.47	-1.0
2,392,388	-		GFF2369	0.47	-1.3
2,392,390	-		GFF2369	0.48	-1.2
2,392,390	-		GFF2369	0.48	-1.3
2,392,390	-		GFF2369	0.48	-1.0
2,392,414	-		GFF2369	0.49	-2.1
2,392,431	+		GFF2369	0.50	+0.8
2,392,442	+		GFF2369	0.50	-0.8
2,392,482	+		GFF2369	0.52	-0.6
2,392,500	+		GFF2369	0.53	-0.4
2,392,500	+		GFF2369	0.53	-0.2
2,392,504	-		GFF2369	0.53	-2.1
2,392,520	+		GFF2369	0.54	-1.8
2,392,540	+		GFF2369	0.55	-0.8
2,392,560	-		GFF2369	0.56	-0.6
2,392,560	-		GFF2369	0.56	-2.2
2,392,577	-		GFF2369	0.57	-0.8
2,392,592	+		GFF2369	0.58	-0.8
2,392,600	-		GFF2369	0.58	-1.4
2,392,600	-		GFF2369	0.58	-0.4
2,392,600	-		GFF2369	0.58	-0.2
2,392,703	-		GFF2369	0.64	-2.7
2,392,703	-		GFF2369	0.64	-2.1
2,392,703	-		GFF2369	0.64	-2.3
2,392,710	+		GFF2369	0.64	+2.6
2,392,757	-		GFF2369	0.66	-1.2
2,392,776	-		GFF2369	0.67	-1.3
2,392,778	-		GFF2369	0.67	-1.9
2,392,783	-		GFF2369	0.68	-1.9
2,392,794	+		GFF2369	0.68	+0.7
2,392,848	-		GFF2369	0.71	-1.4
2,392,939	+		GFF2369	0.76	-2.2
2,392,939	+		GFF2369	0.76	+0.6
2,392,939	+		GFF2369	0.76	-2.1
2,392,944	+		GFF2369	0.76	+0.3
2,392,953	+		GFF2369	0.76	-0.7
2,392,955	+		GFF2369	0.77	-1.7
2,392,972	+		GFF2369	0.77	-0.3
2,392,984	+		GFF2369	0.78	-1.3
2,393,032	+		GFF2369	0.80	+1.8
2,393,045	-		GFF2369	0.81	-0.2
2,393,045	-		GFF2369	0.81	-1.7
2,393,048	+		GFF2369	0.81	-1.3
2,393,048	+		GFF2369	0.81	-0.9
2,393,070	+		GFF2369	0.82	+0.6
2,393,070	+		GFF2369	0.82	-0.5
2,393,078	-		GFF2369	0.83	-0.1
2,393,100	-		GFF2369	0.84	-0.2
2,393,157	-		GFF2369	0.87	-1.8
2,393,203	+		GFF2369	0.89	-3.1
2,393,262	+				+0.1
2,393,270	-				-0.4
2,393,331	+				-0.0
2,393,334	+				-0.5
2,393,339	-				-0.1
2,393,346	-				-0.5
2,393,371	+				-0.5
2,393,440	-				-2.3
2,393,447	+				-1.8
2,393,448	-				-0.7
2,393,468	+				-3.3
2,393,468	+				-1.1
2,393,476	-				-1.5
2,393,483	+				-2.6
2,393,483	+				-2.5
2,393,486	-				-2.1
2,393,491	-				-2.0
2,393,491	-				-0.8
2,393,529	+				-1.8
2,393,545	+				-1.4
2,393,605	-		GFF2370	0.13	-2.6
2,393,605	-		GFF2370	0.13	-1.9
2,393,625	-		GFF2370	0.14	-1.6
2,393,662	+		GFF2370	0.16	-1.4
2,393,662	+		GFF2370	0.16	-2.4
2,393,765	+		GFF2370	0.23	-2.8
2,393,765	+		GFF2370	0.23	-2.1
2,393,765	+		GFF2370	0.23	-2.9
2,393,766	+		GFF2370	0.23	-1.5
2,393,773	-		GFF2370	0.24	-0.8
2,393,773	-		GFF2370	0.24	-2.4
2,393,773	-		GFF2370	0.24	-1.8
2,393,794	+		GFF2370	0.25	-2.3
2,393,797	-		GFF2370	0.25	-2.9
2,393,856	-		GFF2370	0.29	-0.8
2,393,874	-		GFF2370	0.30	-3.3
2,393,876	-		GFF2370	0.30	-0.0
2,393,878	+		GFF2370	0.30	-2.7
2,393,886	-		GFF2370	0.31	-1.0
2,393,886	-		GFF2370	0.31	-3.2
2,393,888	-		GFF2370	0.31	-2.7
2,393,890	+		GFF2370	0.31	-0.6
2,393,903	+		GFF2370	0.32	-2.5
2,393,937	+		GFF2370	0.34	-1.0
2,393,941	+		GFF2370	0.35	-0.9
2,393,941	+		GFF2370	0.35	-2.0
2,393,949	-		GFF2370	0.35	-2.0
2,393,949	-		GFF2370	0.35	-2.0
2,393,949	-		GFF2370	0.35	-2.7
2,393,949	-		GFF2370	0.35	-2.1
2,393,957	+		GFF2370	0.36	-1.4
2,393,966	+		GFF2370	0.36	-1.8
2,393,974	-		GFF2370	0.37	-2.8
2,394,002	+		GFF2370	0.39	-2.2
2,394,021	-		GFF2370	0.40	-2.2
2,394,046	+		GFF2370	0.41	-3.1
2,394,108	-		GFF2370	0.46	-1.8
2,394,142	+		GFF2370	0.48	-1.5
2,394,142	+		GFF2370	0.48	-1.5
2,394,142	+		GFF2370	0.48	-1.7
2,394,145	+		GFF2370	0.48	-2.0
2,394,150	-		GFF2370	0.48	-0.4
2,394,150	-		GFF2370	0.48	-0.4
2,394,150	-		GFF2370	0.48	-1.0
2,394,150	-		GFF2370	0.48	-1.4
2,394,158	+		GFF2370	0.49	-3.1
2,394,174	-		GFF2370	0.50	-2.0
2,394,196	-		GFF2370	0.51	-2.1
2,394,199	+		GFF2370	0.52	-2.8
2,394,200	-		GFF2370	0.52	-1.0
2,394,234	-		GFF2370	0.54	-2.5
2,394,246	-		GFF2370	0.55	-1.8
2,394,270	+		GFF2370	0.56	-1.3
2,394,278	+		GFF2370	0.57	-0.0
2,394,285	+		GFF2370	0.57	-1.4
2,394,285	+		GFF2370	0.57	+0.6
2,394,285	+		GFF2370	0.57	-2.3
2,394,285	+		GFF2370	0.57	-1.8
2,394,285	+		GFF2370	0.57	-1.9
2,394,285	+		GFF2370	0.57	-0.1
2,394,285	+		GFF2370	0.57	-1.9
2,394,285	+		GFF2370	0.57	-1.3
2,394,293	-		GFF2370	0.58	-1.6
2,394,293	-		GFF2370	0.58	-2.8
2,394,303	-		GFF2370	0.58	-2.2
2,394,359	+		GFF2370	0.62	-2.8
2,394,389	+		GFF2370	0.64	-0.9