Strain Fitness in Sphingobium sp. HT1-2 around GFF2036

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
2,066,211	-		GFF2035	0.27	-0.5
2,066,216	-		GFF2035	0.27	-1.2
2,066,227	+		GFF2035	0.28	-1.3
2,066,227	+		GFF2035	0.28	-1.2
2,066,227	+		GFF2035	0.28	+1.0
2,066,227	+		GFF2035	0.28	-1.0
2,066,235	-		GFF2035	0.28	+0.6
2,066,235	-		GFF2035	0.28	-0.9
2,066,237	+		GFF2035	0.29	+1.1
2,066,245	-		GFF2035	0.29	+0.6
2,066,245	-		GFF2035	0.29	-0.1
2,066,258	+		GFF2035	0.30	-0.1
2,066,266	+		GFF2035	0.31	-0.9
2,066,266	+		GFF2035	0.31	+0.3
2,066,268	-		GFF2035	0.31	+0.8
2,066,271	+		GFF2035	0.31	-0.1
2,066,271	+		GFF2035	0.31	-1.9
2,066,274	-		GFF2035	0.32	-1.0
2,066,274	-		GFF2035	0.32	-1.7
2,066,274	-		GFF2035	0.32	+0.9
2,066,274	-		GFF2035	0.32	+1.3
2,066,284	-		GFF2035	0.32	+0.6
2,066,284	-		GFF2035	0.32	-0.2
2,066,293	+		GFF2035	0.33	-0.4
2,066,293	+		GFF2035	0.33	-0.2
2,066,306	-		GFF2035	0.34	-1.0
2,066,306	-		GFF2035	0.34	+0.5
2,066,348	-		GFF2035	0.37	+2.2
2,066,353	-		GFF2035	0.38	+0.6
2,066,456	+		GFF2035	0.46	-0.3
2,066,546	-		GFF2035	0.53	+1.8
2,066,548	+		GFF2035	0.53	-0.1
2,066,556	-		GFF2035	0.54	-0.4
2,066,556	-		GFF2035	0.54	+1.9
2,066,568	+		GFF2035	0.55	-0.0
2,066,570	-		GFF2035	0.55	+0.4
2,066,576	-		GFF2035	0.55	-0.2
2,066,594	+		GFF2035	0.57	-1.5
2,066,626	-		GFF2035	0.59	+1.3
2,066,626	-		GFF2035	0.59	+0.3
2,066,631	-		GFF2035	0.60	-1.1
2,066,635	-		GFF2035	0.60	+0.1
2,066,645	-		GFF2035	0.61	-1.7
2,066,645	-		GFF2035	0.61	+0.8
2,066,645	-		GFF2035	0.61	+1.0
2,066,645	-		GFF2035	0.61	+1.0
2,066,653	+		GFF2035	0.62	-0.6
2,066,653	+		GFF2035	0.62	-0.7
2,066,653	+		GFF2035	0.62	+0.2
2,066,653	+		GFF2035	0.62	+0.8
2,066,653	+		GFF2035	0.62	+0.5
2,066,661	-		GFF2035	0.62	+0.5
2,066,661	-		GFF2035	0.62	+0.2
2,066,661	-		GFF2035	0.62	+1.1
2,066,661	-		GFF2035	0.62	-0.5
2,066,687	+		GFF2035	0.64	+0.7
2,066,703	+		GFF2035	0.66	-0.8
2,066,816	-		GFF2035	0.75	-0.5
2,066,816	-		GFF2035	0.75	+0.1
2,066,823	-		GFF2035	0.75	-0.9
2,066,835	+		GFF2035	0.76	-1.8
2,066,860	-		GFF2035	0.78	+0.1
2,066,931	+		GFF2035	0.84	-0.4
2,066,931	+		GFF2035	0.84	-0.0
2,066,931	+		GFF2035	0.84	+1.4
2,066,931	+		GFF2035	0.84	+0.7
2,066,931	+		GFF2035	0.84	-0.7
2,066,931	+		GFF2035	0.84	+0.3
2,066,931	+		GFF2035	0.84	+0.4
2,066,931	+		GFF2035	0.84	+1.6
2,066,931	+		GFF2035	0.84	-0.2
2,066,931	+		GFF2035	0.84	-0.9
2,066,931	+		GFF2035	0.84	-0.5
2,066,931	+		GFF2035	0.84	-0.3
2,066,939	-		GFF2035	0.84	+0.4
2,066,939	-		GFF2035	0.84	+0.1
2,066,939	-		GFF2035	0.84	+1.4
2,066,939	-		GFF2035	0.84	-0.3
2,066,939	-		GFF2035	0.84	-0.3
2,066,939	-		GFF2035	0.84	+1.1
2,066,939	-		GFF2035	0.84	-0.8
2,066,939	-		GFF2035	0.84	+1.6
2,066,939	-		GFF2035	0.84	+0.3
2,066,939	-		GFF2035	0.84	-0.5
2,066,939	-		GFF2035	0.84	+0.1
2,066,939	-		GFF2035	0.84	-0.5
2,066,939	-		GFF2035	0.84	+0.6
2,066,939	-		GFF2035	0.84	-0.9
2,066,939	-		GFF2035	0.84	-0.2
2,066,939	-		GFF2035	0.84	-1.1
2,066,967	+		GFF2035	0.87	+0.9
2,066,975	-		GFF2035	0.87	-0.0
2,066,979	+		GFF2035	0.87	-0.0
2,066,979	+		GFF2035	0.87	+0.4
2,066,979	+		GFF2035	0.87	+1.3
2,066,979	+		GFF2035	0.87	-2.4
2,066,979	+		GFF2035	0.87	+1.4
2,066,979	+		GFF2035	0.87	-0.1
2,066,985	-		GFF2035	0.88	+1.3
2,066,987	-		GFF2035	0.88	+0.4
2,066,987	-		GFF2035	0.88	-0.3
2,066,989	+		GFF2035	0.88	-1.4
2,066,992	-		GFF2035	0.88	-2.0
2,067,033	+				+0.6
2,067,063	-				-1.2
2,067,064	+				+0.2
2,067,095	+				+0.3
2,067,095	+				+1.1
2,067,096	-				-0.6
2,067,096	-				-1.1
2,067,098	-				-1.0
2,067,134	+				-2.6
2,067,141	-				+1.2
2,067,152	-				+1.4
2,067,189	-				+0.1
2,067,191	+				-2.4
2,067,194	-				-0.7
2,067,365	+				+1.3
2,067,469	+		GFF2036	0.13	-1.4
2,067,470	+		GFF2036	0.13	-0.4
2,067,477	-		GFF2036	0.13	-2.1
2,067,537	+		GFF2036	0.16	+0.7
2,067,558	+		GFF2036	0.17	-1.7
2,067,558	+		GFF2036	0.17	-0.4
2,067,558	+		GFF2036	0.17	-1.6
2,067,598	+		GFF2036	0.19	-0.9
2,067,602	-		GFF2036	0.19	-0.2
2,067,647	-		GFF2036	0.21	+0.3
2,067,671	-		GFF2036	0.22	+0.3
2,067,680	+		GFF2036	0.23	-0.0
2,067,682	-		GFF2036	0.23	-0.8
2,067,804	+		GFF2036	0.28	-1.3
2,067,804	+		GFF2036	0.28	-1.6
2,067,804	+		GFF2036	0.28	-2.7
2,067,814	+		GFF2036	0.29	+1.0
2,067,814	+		GFF2036	0.29	-0.9
2,067,822	-		GFF2036	0.29	-0.5
2,067,822	-		GFF2036	0.29	-1.7
2,067,828	+		GFF2036	0.30	-2.0
2,067,850	+		GFF2036	0.31	+0.5
2,067,850	+		GFF2036	0.31	+1.3
2,067,875	-		GFF2036	0.32	-2.9
2,067,875	-		GFF2036	0.32	-1.2
2,067,889	-		GFF2036	0.32	+0.6
2,067,911	+		GFF2036	0.33	+0.1
2,067,929	+		GFF2036	0.34	+0.5
2,067,950	-		GFF2036	0.35	-0.7
2,067,990	-		GFF2036	0.37	-0.0
2,068,005	-		GFF2036	0.38	-1.9
2,068,024	-		GFF2036	0.39	-0.0
2,068,067	+		GFF2036	0.41	-1.0
2,068,107	+		GFF2036	0.42	-1.3
2,068,114	+		GFF2036	0.43	-2.7
2,068,114	+		GFF2036	0.43	-1.2
2,068,164	+		GFF2036	0.45	+1.0
2,068,164	+		GFF2036	0.45	+0.2
2,068,164	+		GFF2036	0.45	-0.3
2,068,164	+		GFF2036	0.45	-2.4
2,068,164	+		GFF2036	0.45	+0.3
2,068,164	+		GFF2036	0.45	+2.4
2,068,164	+		GFF2036	0.45	-1.7
2,068,164	+		GFF2036	0.45	-0.2
2,068,164	+		GFF2036	0.45	-1.1
2,068,164	+		GFF2036	0.45	-0.4
2,068,164	+		GFF2036	0.45	-1.2
2,068,164	+		GFF2036	0.45	-1.8
2,068,164	+		GFF2036	0.45	-1.0
2,068,164	+		GFF2036	0.45	-0.4
2,068,164	+		GFF2036	0.45	-0.1
2,068,164	+		GFF2036	0.45	-0.4
2,068,164	+		GFF2036	0.45	-1.2
2,068,164	+		GFF2036	0.45	-1.2
2,068,164	+		GFF2036	0.45	-1.5
2,068,164	+		GFF2036	0.45	-1.3
2,068,164	+		GFF2036	0.45	-1.8
2,068,164	+		GFF2036	0.45	-0.7
2,068,164	+		GFF2036	0.45	-0.0
2,068,164	+		GFF2036	0.45	-1.4
2,068,164	+		GFF2036	0.45	-1.0
2,068,172	-		GFF2036	0.45	-0.0
2,068,172	-		GFF2036	0.45	-0.0
2,068,172	-		GFF2036	0.45	-1.7
2,068,172	-		GFF2036	0.45	-0.2
2,068,172	-		GFF2036	0.45	-0.2
2,068,172	-		GFF2036	0.45	-2.5
2,068,172	-		GFF2036	0.45	-0.4
2,068,172	-		GFF2036	0.45	+0.6
2,068,172	-		GFF2036	0.45	-0.9
2,068,172	-		GFF2036	0.45	-1.6
2,068,172	-		GFF2036	0.45	-0.6
2,068,172	-		GFF2036	0.45	+0.4
2,068,172	-		GFF2036	0.45	-0.6
2,068,193	+		GFF2036	0.46	+0.8
2,068,223	-		GFF2036	0.48	-1.0
2,068,230	+		GFF2036	0.48	-1.2
2,068,232	+		GFF2036	0.48	-0.8
2,068,240	-		GFF2036	0.49	-1.4
2,068,287	+		GFF2036	0.51	-2.6
2,068,317	+		GFF2036	0.52	-1.2
2,068,356	-		GFF2036	0.54	-0.5
2,068,395	-		GFF2036	0.56	-0.1
2,068,431	-		GFF2036	0.57	+0.3
2,068,432	+		GFF2036	0.57	-0.3
2,068,446	-		GFF2036	0.58	-0.2
2,068,454	+		GFF2036	0.58	-0.2
2,068,478	+		GFF2036	0.59	+0.4
2,068,498	+		GFF2036	0.60	+0.8
2,068,519	+		GFF2036	0.61	-0.5
2,068,519	+		GFF2036	0.61	-1.3
2,068,556	-		GFF2036	0.63	+0.4
2,068,592	+		GFF2036	0.65	-0.2
2,068,592	+		GFF2036	0.65	-1.8
2,068,592	+		GFF2036	0.65	+0.7
2,068,592	+		GFF2036	0.65	-0.0
2,068,592	+		GFF2036	0.65	-0.4
2,068,600	-		GFF2036	0.65	-1.7
2,068,611	+		GFF2036	0.66	-0.0
2,068,619	-		GFF2036	0.66	-0.7
2,068,650	-		GFF2036	0.67	+0.8
2,068,655	-		GFF2036	0.68	-1.2
2,068,657	+		GFF2036	0.68	+1.3
2,068,668	+		GFF2036	0.68	-1.0
2,068,689	+		GFF2036	0.69	-0.4
2,068,713	-		GFF2036	0.70	+0.8
2,068,715	+		GFF2036	0.70	-0.1
2,068,715	-		GFF2036	0.70	-0.6
2,068,720	+		GFF2036	0.71	-0.2
2,068,720	+		GFF2036	0.71	-1.9
2,068,723	-		GFF2036	0.71	-0.6
2,068,728	-		GFF2036	0.71	-1.7
2,068,728	-		GFF2036	0.71	-0.7
2,068,728	-		GFF2036	0.71	+0.3
2,068,728	-		GFF2036	0.71	+1.0
2,068,728	-		GFF2036	0.71	-1.4
2,068,741	+		GFF2036	0.72	-1.0
2,068,741	-		GFF2036	0.72	+0.6
2,068,754	-		GFF2036	0.72	-0.7
2,068,754	-		GFF2036	0.72	-0.1
2,068,759	+		GFF2036	0.72	-1.8
2,068,767	-		GFF2036	0.73	-0.7
2,068,767	-		GFF2036	0.73	-1.4
2,068,791	+		GFF2036	0.74	-0.7
2,068,796	+		GFF2036	0.74	+0.7
2,068,798	-		GFF2036	0.74	-1.2
2,068,801	+		GFF2036	0.74	-1.8
2,068,933	-		GFF2036	0.80	-2.3
2,069,047	-		GFF2036	0.86	-1.8
2,069,065	-		GFF2036	0.86	+0.9
2,069,072	-		GFF2036	0.87	-0.0
2,069,132	+		GFF2036	0.90	+0.1
2,069,155	+				-0.6
2,069,161	-				+1.1
2,069,161	-				-1.9
2,069,163	+				+0.2
2,069,168	+				+0.5
2,069,171	-				-1.7
2,069,199	+				-0.8
2,069,239	-				-1.6
2,069,256	-				-1.1
2,069,278	-				-1.2
2,069,292	-				-1.4
2,069,339	+				-0.2
2,069,352	-				-0.1
2,069,352	-				+0.4
2,069,369	-				+1.3
2,069,371	-				-1.1
2,069,371	-				+1.2
2,069,456	-				-1.2
2,069,472	+				-0.5
2,069,501	+				+1.0
2,069,502	+				+0.6
2,069,502	+				-0.7
2,069,509	-				+0.2
2,069,510	-				-0.1
2,069,539	-				-0.4
2,069,539	-				-0.1
2,069,560	-				+1.5
2,069,595	-				+1.9
2,069,597	-				+0.1
2,069,597	-				-1.4
2,069,676	+		GFF2037	0.11	-1.0
2,069,704	+		GFF2037	0.12	-1.6
2,069,704	+		GFF2037	0.12	-1.7
2,069,706	+		GFF2037	0.12	+0.4
2,069,712	-		GFF2037	0.13	-0.9
2,069,728	+		GFF2037	0.13	+0.3
2,069,728	+		GFF2037	0.13	-0.3
2,069,736	-		GFF2037	0.14	-1.3
2,069,736	-		GFF2037	0.14	+0.5
2,069,763	+		GFF2037	0.15	+0.1
2,069,771	-		GFF2037	0.15	-0.1
2,069,825	-		GFF2037	0.17	+0.1
2,069,859	+		GFF2037	0.19	-1.0
2,069,869	+		GFF2037	0.19	-0.2
2,069,877	-		GFF2037	0.19	-0.0
2,069,883	+		GFF2037	0.20	-1.3
2,069,891	-		GFF2037	0.20	+0.2
2,069,928	+		GFF2037	0.21	-0.2
2,069,929	-		GFF2037	0.21	+1.0
2,069,955	+		GFF2037	0.23	-0.4
2,069,962	-		GFF2037	0.23	+0.1
2,069,969	-		GFF2037	0.23	+0.0
2,069,969	-		GFF2037	0.23	-0.1
2,069,969	-		GFF2037	0.23	-0.9
2,069,980	-		GFF2037	0.24	-0.1
2,069,980	-		GFF2037	0.24	+1.1
2,069,980	-		GFF2037	0.24	+1.4
2,069,994	-		GFF2037	0.24	-0.4
2,069,994	-		GFF2037	0.24	-2.2
2,070,032	-		GFF2037	0.26	+1.1
2,070,039	+		GFF2037	0.26	-1.1
2,070,043	+		GFF2037	0.26	-0.0
2,070,076	+		GFF2037	0.27	+0.5
2,070,083	-		GFF2037	0.28	+0.3
2,070,098	-		GFF2037	0.28	+0.5
2,070,098	-		GFF2037	0.28	-0.0
2,070,098	-		GFF2037	0.28	-0.3
2,070,119	-		GFF2037	0.29	-1.3
2,070,124	-		GFF2037	0.29	-0.5
2,070,124	-		GFF2037	0.29	+0.8
2,070,139	+		GFF2037	0.30	+0.0
2,070,146	-		GFF2037	0.30	+1.1
2,070,147	+		GFF2037	0.30	-1.6
2,070,186	+		GFF2037	0.32	+0.7
2,070,279	+		GFF2037	0.36	+1.0
2,070,287	-		GFF2037	0.36	+1.8
2,070,287	-		GFF2037	0.36	+0.2