Strain Fitness in Sphingobium sp. HT1-2 around GFF1017

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
1,017,437	+		GFF1016	0.25	-0.4
1,017,466	+		GFF1016	0.27	-1.1
1,017,470	-		GFF1016	0.27	-1.3
1,017,476	-		GFF1016	0.28	+0.6
1,017,538	-		GFF1016	0.33	+0.5
1,017,538	-		GFF1016	0.33	+0.4
1,017,553	-		GFF1016	0.34	-0.8
1,017,555	-		GFF1016	0.35	+0.6
1,017,555	-		GFF1016	0.35	-0.2
1,017,563	-		GFF1016	0.35	-2.4
1,017,568	-		GFF1016	0.36	-1.1
1,017,568	-		GFF1016	0.36	+0.6
1,017,588	+		GFF1016	0.37	-0.9
1,017,614	+		GFF1016	0.40	-1.7
1,017,615	+		GFF1016	0.40	-1.4
1,017,615	+		GFF1016	0.40	-0.9
1,017,624	-		GFF1016	0.40	-1.8
1,017,638	+		GFF1016	0.42	+0.0
1,017,646	-		GFF1016	0.42	+1.1
1,017,659	-		GFF1016	0.43	-0.1
1,017,675	+		GFF1016	0.45	-0.4
1,017,675	+		GFF1016	0.45	+0.7
1,017,675	+		GFF1016	0.45	-0.5
1,017,675	+		GFF1016	0.45	+0.9
1,017,675	+		GFF1016	0.45	+0.4
1,017,675	+		GFF1016	0.45	+0.3
1,017,675	-		GFF1016	0.45	-0.6
1,017,683	-		GFF1016	0.45	-0.5
1,017,683	-		GFF1016	0.45	-0.3
1,017,683	-		GFF1016	0.45	-1.1
1,017,683	-		GFF1016	0.45	-1.5
1,017,685	+		GFF1016	0.45	+0.8
1,017,685	-		GFF1016	0.45	-1.3
1,017,693	-		GFF1016	0.46	-1.3
1,017,693	-		GFF1016	0.46	+0.6
1,017,740	+		GFF1016	0.50	+0.3
1,017,743	-		GFF1016	0.50	+0.5
1,017,767	+		GFF1016	0.52	-1.1
1,017,767	+		GFF1016	0.52	-1.3
1,017,771	+		GFF1016	0.53	-0.2
1,017,775	-		GFF1016	0.53	-1.3
1,017,777	+		GFF1016	0.53	-0.5
1,017,792	-		GFF1016	0.54	-0.3
1,017,792	-		GFF1016	0.54	-1.6
1,017,827	+		GFF1016	0.57	-0.9
1,017,829	+		GFF1016	0.58	-1.0
1,017,853	+		GFF1016	0.60	-0.1
1,017,861	-		GFF1016	0.60	+1.3
1,017,890	+		GFF1016	0.63	-0.7
1,017,900	-		GFF1016	0.63	+0.0
1,017,908	-		GFF1016	0.64	-1.1
1,017,914	-		GFF1016	0.65	-0.5
1,017,916	+		GFF1016	0.65	+1.5
1,017,916	+		GFF1016	0.65	+1.4
1,017,927	-		GFF1016	0.66	-1.4
1,017,944	+		GFF1016	0.67	-2.3
1,017,956	+		GFF1016	0.68	+1.2
1,017,992	-		GFF1016	0.71	+0.4
1,018,008	+		GFF1016	0.73	+0.3
1,018,010	+		GFF1016	0.73	-0.8
1,018,016	-		GFF1016	0.73	+1.0
1,018,050	-		GFF1016	0.76	-0.3
1,018,129	-		GFF1016	0.83	+0.5
1,018,143	+		GFF1016	0.84	+0.2
1,018,154	+		GFF1016	0.85	-0.8
1,018,154	-		GFF1016	0.85	+0.4
1,018,156	+		GFF1016	0.85	+0.2
1,018,162	-		GFF1016	0.85	+0.2
1,018,164	+		GFF1016	0.86	+1.5
1,018,167	-		GFF1016	0.86	+0.7
1,018,172	-		GFF1016	0.86	-1.7
1,018,177	+		GFF1016	0.87	-0.0
1,018,205	-		GFF1016	0.89	-1.1
1,018,247	+				+1.0
1,018,248	-				-2.6
1,018,255	-				+0.4
1,018,255	-				-0.1
1,018,257	+				-2.3
1,018,257	+				-1.8
1,018,257	+				+0.5
1,018,257	+				+0.1
1,018,265	-				-1.3
1,018,265	-				-1.7
1,018,265	-				-1.6
1,018,295	-				-0.3
1,018,304	+				+0.7
1,018,304	+				-0.1
1,018,304	+				-0.4
1,018,312	-				-0.5
1,018,312	-				+0.1
1,018,318	-				+0.2
1,018,329	-				-0.3
1,018,330	-				+0.2
1,018,345	+				+0.6
1,018,345	+				-0.6
1,018,345	+				-0.7
1,018,351	+				+0.1
1,018,351	+				+0.8
1,018,353	-				-1.1
1,018,353	-				+0.6
1,018,353	-				-2.9
1,018,359	-				+1.3
1,018,359	-				+0.6
1,018,359	-				+1.3
1,018,359	-				-0.3
1,018,369	+				-1.8
1,018,377	-				+0.2
1,018,377	-				+0.0
1,018,440	+		GFF1017	0.60	-0.1
1,018,450	+		GFF1017	0.68	-0.3
1,018,450	+		GFF1017	0.68	+0.2
1,018,450	+		GFF1017	0.68	-1.0
1,018,450	+		GFF1017	0.68	-3.5
1,018,450	+		GFF1017	0.68	+0.3
1,018,458	-		GFF1017	0.75	+0.2
1,018,458	-		GFF1017	0.75	-1.0
1,018,458	-		GFF1017	0.75	-0.7
1,018,458	-		GFF1017	0.75	-0.1
1,018,459	-		GFF1017	0.76	-1.2
1,018,559	-				-0.3
1,018,567	-				-1.6
1,018,579	+				-0.3
1,018,579	+				-0.2
1,018,579	+				+0.6
1,018,579	+				-1.1
1,018,587	-		GFF1018	0.11	-0.3
1,018,587	-		GFF1018	0.11	-0.1
1,018,587	-		GFF1018	0.11	-0.3
1,018,587	-		GFF1018	0.11	-0.6
1,018,598	+		GFF1018	0.12	+0.6
1,018,600	-		GFF1018	0.12	+0.0
1,018,617	-		GFF1018	0.14	-0.5
1,018,629	-		GFF1018	0.16	+0.5
1,018,629	-		GFF1018	0.16	-0.7
1,018,644	+		GFF1018	0.18	-1.3
1,018,644	+		GFF1018	0.18	+0.2
1,018,644	+		GFF1018	0.18	-0.0
1,018,644	+		GFF1018	0.18	-0.6
1,018,644	+		GFF1018	0.18	-0.3
1,018,644	+		GFF1018	0.18	-1.0
1,018,644	+		GFF1018	0.18	-1.1
1,018,644	+		GFF1018	0.18	+0.3
1,018,644	+		GFF1018	0.18	+0.2
1,018,647	-		GFF1018	0.18	-0.8
1,018,652	-		GFF1018	0.19	-0.8
1,018,652	-		GFF1018	0.19	-2.1
1,018,652	-		GFF1018	0.19	+0.1
1,018,652	-		GFF1018	0.19	-0.5
1,018,652	-		GFF1018	0.19	-0.5
1,018,657	+		GFF1018	0.19	+0.5
1,018,657	+		GFF1018	0.19	-2.5
1,018,657	+		GFF1018	0.19	-0.7
1,018,657	+		GFF1018	0.19	-1.3
1,018,657	+		GFF1018	0.19	+0.2
1,018,663	-		GFF1018	0.20	+0.6
1,018,663	-		GFF1018	0.20	+0.3
1,018,663	-		GFF1018	0.20	+1.3
1,018,670	-		GFF1018	0.21	+0.1
1,018,671	-		GFF1018	0.21	-0.6
1,018,676	-		GFF1018	0.22	+1.2
1,018,698	+		GFF1018	0.24	+0.5
1,018,705	+		GFF1018	0.25	-0.4
1,018,706	-		GFF1018	0.25	+0.7
1,018,720	+		GFF1018	0.27	+0.2
1,018,731	-		GFF1018	0.28	+0.1
1,018,731	-		GFF1018	0.28	-2.1
1,018,735	+		GFF1018	0.29	-0.4
1,018,735	+		GFF1018	0.29	+0.9
1,018,735	+		GFF1018	0.29	+0.0
1,018,743	-		GFF1018	0.30	-0.4
1,018,743	-		GFF1018	0.30	-1.6
1,018,769	+		GFF1018	0.33	-0.8
1,018,769	-		GFF1018	0.33	-0.7
1,018,775	+		GFF1018	0.34	-0.4
1,018,775	+		GFF1018	0.34	+0.3
1,018,775	+		GFF1018	0.34	+0.1
1,018,777	-		GFF1018	0.34	-1.3
1,018,777	-		GFF1018	0.34	-1.5
1,018,777	-		GFF1018	0.34	+1.1
1,018,777	-		GFF1018	0.34	+1.7
1,018,812	+		GFF1018	0.38	-1.6
1,018,839	-		GFF1018	0.41	-2.1
1,018,842	+		GFF1018	0.42	+0.2
1,018,861	+		GFF1018	0.44	-0.1
1,018,861	-		GFF1018	0.44	+0.8
1,018,888	-		GFF1018	0.47	-0.6
1,018,943	+		GFF1018	0.54	-1.3
1,018,961	-		GFF1018	0.56	-0.7
1,018,973	-		GFF1018	0.57	-0.4
1,018,981	+		GFF1018	0.58	+0.5
1,018,981	+		GFF1018	0.58	-0.4
1,018,989	-		GFF1018	0.59	-0.3
1,018,991	+		GFF1018	0.60	+0.2
1,018,992	+		GFF1018	0.60	+0.9
1,018,996	+		GFF1018	0.60	+0.6
1,018,996	+		GFF1018	0.60	-0.3
1,018,999	-		GFF1018	0.61	-0.8
1,018,999	-		GFF1018	0.61	-1.3
1,018,999	-		GFF1018	0.61	-1.2
1,019,014	-		GFF1018	0.62	-0.6
1,019,046	-		GFF1018	0.66	-2.3
1,019,082	-		GFF1018	0.71	-0.3
1,019,082	-		GFF1018	0.71	-0.1
1,019,103	-		GFF1018	0.73	-1.3
1,019,109	-		GFF1018	0.74	-0.5
1,019,110	+		GFF1018	0.74	+0.6
1,019,149	+		GFF1018	0.79	-2.0
1,019,175	+		GFF1018	0.82	+0.3
1,019,181	+		GFF1018	0.83	+1.1
1,019,183	-		GFF1018	0.83	-0.1
1,019,186	+		GFF1018	0.83	-0.7
1,019,194	-		GFF1018	0.84	-1.3
1,019,194	-		GFF1018	0.84	+0.1
1,019,194	-		GFF1018	0.84	-0.8
1,019,194	-		GFF1018	0.84	-1.2
1,019,209	-		GFF1018	0.86	-1.8
1,019,224	-		GFF1018	0.88	-0.1
1,019,231	-		GFF1018	0.89	+0.0
1,019,231	-		GFF1018	0.89	-0.1
1,019,239	-		GFF1018	0.90	-1.6
1,019,241	+		GFF1018	0.90	-2.0
1,019,241	-		GFF1018	0.90	+0.4
1,019,241	-		GFF1018	0.90	-0.0
1,019,256	+				+0.3
1,019,261	+				-0.3
1,019,261	+				+0.9
1,019,261	-				-0.3
1,019,266	+				-0.2
1,019,266	+				-1.4
1,019,269	-				+0.2
1,019,274	-				+0.3
1,019,276	+				-0.1
1,019,276	+				+0.4
1,019,279	-				+0.3
1,019,279	-				-0.7
1,019,279	-				-0.7
1,019,284	-				-2.3
1,019,284	-				-2.1
1,019,284	-				+0.3
1,019,284	-				-0.7
1,019,284	-				-1.8
1,019,284	-				+1.0
1,019,284	-				+0.7
1,019,284	-				-0.3
1,019,285	-				+1.0
1,019,285	-				-1.3
1,019,313	+				+1.7
1,019,323	+				+0.5
1,019,331	-				-0.5
1,019,344	-				+0.2
1,019,377	-				+0.4
1,019,384	+				-0.8
1,019,384	+				-1.8
1,019,387	+				-2.1
1,019,395	+				-0.3
1,019,403	-				+0.6
1,019,403	-				+0.9
1,019,403	-				-1.4
1,019,405	+				-0.7
1,019,408	-				-1.0
1,019,413	-				+0.4
1,019,423	-				+1.9
1,019,423	-				-1.1
1,019,423	-				+0.3
1,019,428	-				-0.7
1,019,428	-				+0.2
1,019,428	-				+0.7
1,019,435	+				+0.1
1,019,435	+				+0.3
1,019,435	-				+0.9
1,019,469	-				-1.1
1,019,474	-				-2.2