Strain Fitness in Sphingobium sp. HT1-2 around GFF5033

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
5,026,553	+		GFF5032	0.45	+1.5
5,026,553	+		GFF5032	0.45	+0.2
5,026,553	+		GFF5032	0.45	+1.7
5,026,561	-		GFF5032	0.45	+0.2
5,026,561	-		GFF5032	0.45	+0.2
5,026,561	-		GFF5032	0.45	-1.0
5,026,561	-		GFF5032	0.45	-0.3
5,026,563	+		GFF5032	0.45	+0.3
5,026,563	+		GFF5032	0.45	-0.6
5,026,563	+		GFF5032	0.45	+0.8
5,026,563	+		GFF5032	0.45	-0.4
5,026,570	+		GFF5032	0.46	+1.1
5,026,604	-		GFF5032	0.48	+1.0
5,026,604	-		GFF5032	0.48	+1.4
5,026,605	+		GFF5032	0.48	+0.2
5,026,605	+		GFF5032	0.48	-0.2
5,026,607	+		GFF5032	0.48	-0.9
5,026,607	+		GFF5032	0.48	+1.6
5,026,607	+		GFF5032	0.48	-0.3
5,026,607	+		GFF5032	0.48	-0.1
5,026,613	-		GFF5032	0.48	+0.0
5,026,613	-		GFF5032	0.48	-0.5
5,026,614	-		GFF5032	0.48	-0.0
5,026,615	-		GFF5032	0.48	+0.4
5,026,615	-		GFF5032	0.48	+0.5
5,026,625	-		GFF5032	0.49	+0.6
5,026,635	+		GFF5032	0.50	-0.3
5,026,650	+		GFF5032	0.50	+0.4
5,026,653	-		GFF5032	0.51	-0.6
5,026,658	-		GFF5032	0.51	+0.2
5,026,687	+		GFF5032	0.53	-0.3
5,026,687	+		GFF5032	0.53	+0.7
5,026,698	+		GFF5032	0.53	+0.8
5,026,698	+		GFF5032	0.53	+0.8
5,026,711	-		GFF5032	0.54	-0.3
5,026,727	-		GFF5032	0.55	+0.7
5,026,778	+		GFF5032	0.58	-0.9
5,026,783	+		GFF5032	0.58	-0.4
5,026,803	-		GFF5032	0.59	-1.1
5,026,835	-		GFF5032	0.61	-0.2
5,026,835	-		GFF5032	0.61	+1.0
5,026,852	-		GFF5032	0.62	+1.2
5,026,852	-		GFF5032	0.62	-0.6
5,026,855	+		GFF5032	0.62	+1.1
5,026,862	+		GFF5032	0.63	-1.8
5,026,880	-		GFF5032	0.64	+0.7
5,026,881	+		GFF5032	0.64	+0.2
5,026,882	+		GFF5032	0.64	+1.0
5,026,885	-		GFF5032	0.64	+1.5
5,026,890	-		GFF5032	0.64	-0.8
5,026,890	-		GFF5032	0.64	+0.2
5,026,890	-		GFF5032	0.64	+0.0
5,026,890	-		GFF5032	0.64	+0.5
5,026,892	-		GFF5032	0.65	+0.6
5,026,896	+		GFF5032	0.65	+0.9
5,026,902	+		GFF5032	0.65	-2.3
5,026,902	+		GFF5032	0.65	+0.1
5,026,902	-		GFF5032	0.65	+2.1
5,026,910	-		GFF5032	0.66	-0.6
5,026,910	-		GFF5032	0.66	-0.2
5,026,936	-		GFF5032	0.67	+0.0
5,026,957	-		GFF5032	0.68	+0.7
5,026,964	+		GFF5032	0.69	+0.2
5,026,964	+		GFF5032	0.69	+1.0
5,026,964	+		GFF5032	0.69	-0.1
5,026,971	-		GFF5032	0.69	-0.1
5,026,972	-		GFF5032	0.69	+1.5
5,026,972	-		GFF5032	0.69	-2.2
5,026,979	-		GFF5032	0.70	+0.2
5,026,979	-		GFF5032	0.70	+1.1
5,026,981	-		GFF5032	0.70	-0.5
5,026,981	-		GFF5032	0.70	+0.5
5,026,993	+		GFF5032	0.71	-1.6
5,026,994	+		GFF5032	0.71	-0.8
5,027,002	-		GFF5032	0.71	+1.0
5,027,002	-		GFF5032	0.71	-0.2
5,027,002	-		GFF5032	0.71	+1.2
5,027,050	+		GFF5032	0.74	-0.0
5,027,050	+		GFF5032	0.74	+0.5
5,027,058	-		GFF5032	0.74	+0.5
5,027,058	-		GFF5032	0.74	-0.0
5,027,058	-		GFF5032	0.74	-0.8
5,027,058	-		GFF5032	0.74	+1.5
5,027,081	+		GFF5032	0.76	-1.8
5,027,085	+		GFF5032	0.76	-1.6
5,027,085	+		GFF5032	0.76	+0.3
5,027,085	+		GFF5032	0.76	-1.2
5,027,085	+		GFF5032	0.76	+0.5
5,027,085	+		GFF5032	0.76	-0.5
5,027,085	+		GFF5032	0.76	+0.3
5,027,085	+		GFF5032	0.76	+0.6
5,027,085	+		GFF5032	0.76	-0.4
5,027,085	+		GFF5032	0.76	-0.8
5,027,085	+		GFF5032	0.76	+0.5
5,027,085	+		GFF5032	0.76	+1.3
5,027,085	+		GFF5032	0.76	+0.3
5,027,085	+		GFF5032	0.76	+0.5
5,027,085	+		GFF5032	0.76	-0.4
5,027,085	+		GFF5032	0.76	+0.2
5,027,085	+		GFF5032	0.76	-0.2
5,027,085	+		GFF5032	0.76	+0.6
5,027,085	+		GFF5032	0.76	+1.3
5,027,085	+		GFF5032	0.76	-2.2
5,027,093	-		GFF5032	0.76	+0.4
5,027,093	-		GFF5032	0.76	+0.6
5,027,093	-		GFF5032	0.76	+0.2
5,027,093	-		GFF5032	0.76	+0.8
5,027,093	-		GFF5032	0.76	+0.4
5,027,093	-		GFF5032	0.76	+1.0
5,027,093	-		GFF5032	0.76	-0.7
5,027,093	-		GFF5032	0.76	-0.0
5,027,093	-		GFF5032	0.76	+1.0
5,027,093	-		GFF5032	0.76	-0.0
5,027,093	-		GFF5032	0.76	-0.4
5,027,093	-		GFF5032	0.76	-1.8
5,027,093	-		GFF5032	0.76	+0.8
5,027,093	-		GFF5032	0.76	+0.9
5,027,093	-		GFF5032	0.76	-0.4
5,027,093	-		GFF5032	0.76	+1.0
5,027,096	-		GFF5032	0.77	+1.1
5,027,108	+		GFF5032	0.77	-0.4
5,027,116	-		GFF5032	0.78	+0.3
5,027,133	-		GFF5032	0.79	+0.1
5,027,138	+		GFF5032	0.79	-1.3
5,027,150	+		GFF5032	0.80	+0.0
5,027,158	-		GFF5032	0.80	-2.4
5,027,158	-		GFF5032	0.80	-1.8
5,027,177	+		GFF5032	0.81	+0.9
5,027,177	+		GFF5032	0.81	+1.2
5,027,177	+		GFF5032	0.81	+0.2
5,027,177	+		GFF5032	0.81	-1.2
5,027,177	+		GFF5032	0.81	+0.8
5,027,177	+		GFF5032	0.81	-0.4
5,027,177	+		GFF5032	0.81	+0.1
5,027,177	+		GFF5032	0.81	+1.6
5,027,177	+		GFF5032	0.81	+0.9
5,027,185	-		GFF5032	0.82	+1.4
5,027,185	-		GFF5032	0.82	-1.9
5,027,185	-		GFF5032	0.82	+0.8
5,027,185	-		GFF5032	0.82	-0.1
5,027,185	-		GFF5032	0.82	-0.8
5,027,185	-		GFF5032	0.82	+1.3
5,027,185	-		GFF5032	0.82	+0.1
5,027,185	-		GFF5032	0.82	+2.0
5,027,185	-		GFF5032	0.82	-1.4
5,027,187	+		GFF5032	0.82	-0.2
5,027,212	+		GFF5032	0.83	+0.4
5,027,214	+		GFF5032	0.84	+0.9
5,027,220	-		GFF5032	0.84	+1.5
5,027,240	+		GFF5032	0.85	+1.0
5,027,240	+		GFF5032	0.85	+0.4
5,027,249	+		GFF5032	0.86	+0.7
5,027,281	-		GFF5032	0.87	-1.4
5,027,300	-		GFF5032	0.89	+0.9
5,027,302	+		GFF5032	0.89	-0.5
5,027,302	+		GFF5032	0.89	-1.6
5,027,303	-		GFF5032	0.89	-1.7
5,027,305	-		GFF5032	0.89	-1.3
5,027,333	+				-0.4
5,027,338	+				-0.4
5,027,338	+				-0.8
5,027,341	-				-2.6
5,027,341	-				+0.3
5,027,346	-				-0.7
5,027,354	+				-0.5
5,027,381	-				-0.5
5,027,439	-				-0.2
5,027,456	-				+1.4
5,027,460	+				+1.6
5,027,460	+				-1.5
5,027,468	-				+0.6
5,027,489	-				+0.6
5,027,545	+				+0.8
5,027,545	+				-0.8
5,027,545	+				+0.5
5,027,549	+				-1.1
5,027,568	+				-1.4
5,027,570	+				+0.3
5,027,570	+				-0.4
5,027,575	+				-1.1
5,027,575	+				+0.1
5,027,575	+				-0.1
5,027,575	+				-0.7
5,027,575	+				-0.1
5,027,575	+				-0.6
5,027,578	-				+1.1
5,027,578	-				-0.2
5,027,578	-				-0.4
5,027,578	-				-0.8
5,027,583	-				-1.2
5,027,583	-				+1.0
5,027,583	-				+0.5
5,027,583	-				-0.5
5,027,583	-				+0.7
5,027,583	-				-0.8
5,027,583	-				-0.4
5,027,583	-				+0.2
5,027,583	-				+0.2
5,027,583	-				-1.0
5,027,605	+				-0.8
5,027,605	+				+0.1
5,027,613	-				+1.3
5,027,652	+				+0.3
5,027,660	-				+1.2
5,027,661	+				+0.5
5,027,685	+		GFF5033	0.11	+0.2
5,027,685	+		GFF5033	0.11	-0.4
5,027,685	+		GFF5033	0.11	-0.9
5,027,685	+		GFF5033	0.11	+1.8
5,027,685	+		GFF5033	0.11	-0.9
5,027,693	-		GFF5033	0.12	+1.2
5,027,693	-		GFF5033	0.12	+1.0
5,027,693	-		GFF5033	0.12	-2.2
5,027,693	-		GFF5033	0.12	-0.4
5,027,693	-		GFF5033	0.12	-1.1
5,027,701	+		GFF5033	0.13	-0.2
5,027,709	-		GFF5033	0.13	-1.8
5,027,709	-		GFF5033	0.13	+0.2
5,027,714	-		GFF5033	0.14	-0.3
5,027,751	+		GFF5033	0.16	+0.5
5,027,762	-		GFF5033	0.17	+0.2
5,027,768	-		GFF5033	0.18	+0.3
5,027,770	+		GFF5033	0.18	-0.3
5,027,770	+		GFF5033	0.18	+0.4
5,027,770	+		GFF5033	0.18	+1.0
5,027,770	+		GFF5033	0.18	-0.4
5,027,778	-		GFF5033	0.18	-1.0
5,027,778	-		GFF5033	0.18	+0.6
5,027,778	-		GFF5033	0.18	+1.2
5,027,778	-		GFF5033	0.18	+0.6
5,027,811	-		GFF5033	0.21	-1.0
5,027,825	+		GFF5033	0.22	-0.6
5,027,918	-		GFF5033	0.29	+0.4
5,027,948	+		GFF5033	0.31	-1.3
5,027,953	+		GFF5033	0.31	+0.4
5,027,958	+		GFF5033	0.32	-0.2
5,027,967	+		GFF5033	0.32	+0.3
5,028,038	+		GFF5033	0.38	+0.1
5,028,047	+		GFF5033	0.38	-0.7
5,028,055	-		GFF5033	0.39	-1.5
5,028,062	+		GFF5033	0.39	+0.7
5,028,062	+		GFF5033	0.39	-0.3
5,028,112	+		GFF5033	0.43	-0.9
5,028,117	+		GFF5033	0.43	+0.3
5,028,122	+		GFF5033	0.44	-1.8
5,028,130	-		GFF5033	0.44	+0.3
5,028,130	-		GFF5033	0.44	+0.3
5,028,151	+		GFF5033	0.46	+2.0
5,028,152	-		GFF5033	0.46	-0.2
5,028,190	-		GFF5033	0.49	-0.4
5,028,191	-		GFF5033	0.49	+1.6
5,028,247	+		GFF5033	0.53	+0.2
5,028,247	+		GFF5033	0.53	-1.1
5,028,248	+		GFF5033	0.53	+0.4
5,028,248	+		GFF5033	0.53	-0.2
5,028,250	-		GFF5033	0.53	-0.5
5,028,255	-		GFF5033	0.54	-1.5
5,028,256	-		GFF5033	0.54	-0.4
5,028,256	-		GFF5033	0.54	-2.0
5,028,256	-		GFF5033	0.54	+0.1
5,028,256	-		GFF5033	0.54	-1.7
5,028,267	+		GFF5033	0.55	+0.6
5,028,285	-		GFF5033	0.56	+0.0
5,028,290	-		GFF5033	0.56	-1.4
5,028,306	+		GFF5033	0.57	-1.4
5,028,314	-		GFF5033	0.58	-0.9
5,028,314	-		GFF5033	0.58	+1.2
5,028,324	+		GFF5033	0.59	+1.6
5,028,332	-		GFF5033	0.59	+0.6
5,028,332	-		GFF5033	0.59	+1.3
5,028,350	-		GFF5033	0.61	-1.6
5,028,357	+		GFF5033	0.61	+0.0
5,028,367	+		GFF5033	0.62	+1.0
5,028,369	-		GFF5033	0.62	-1.3
5,028,375	-		GFF5033	0.63	+0.1
5,028,375	-		GFF5033	0.63	+1.0
5,028,388	-		GFF5033	0.63	+0.8
5,028,422	+		GFF5033	0.66	+0.1
5,028,436	+		GFF5033	0.67	-2.6
5,028,446	+		GFF5033	0.68	+1.5
5,028,456	+		GFF5033	0.69	+0.7
5,028,456	+		GFF5033	0.69	-2.1
5,028,480	+		GFF5033	0.70	-0.1
5,028,480	+		GFF5033	0.70	-0.0
5,028,504	+		GFF5033	0.72	-0.7
5,028,512	-		GFF5033	0.73	-0.1
5,028,513	+		GFF5033	0.73	-1.9
5,028,523	+		GFF5033	0.73	-0.1
5,028,534	+		GFF5033	0.74	+0.2
5,028,539	+		GFF5033	0.75	+0.0
5,028,544	+		GFF5033	0.75	-2.5
5,028,552	+		GFF5033	0.76	-0.0
5,028,552	+		GFF5033	0.76	-1.0
5,028,552	+		GFF5033	0.76	+1.4
5,028,557	+		GFF5033	0.76	+1.7
5,028,562	+		GFF5033	0.76	-0.7
5,028,570	+		GFF5033	0.77	-0.5
5,028,570	-		GFF5033	0.77	+0.0
5,028,579	+		GFF5033	0.78	+0.6
5,028,584	+		GFF5033	0.78	-1.3
5,028,587	-		GFF5033	0.78	-0.7
5,028,592	-		GFF5033	0.79	+2.0
5,028,592	-		GFF5033	0.79	+0.9
5,028,597	-		GFF5033	0.79	-1.0
5,028,638	+		GFF5033	0.82	+0.7
5,028,646	+		GFF5033	0.83	-0.0
5,028,646	+		GFF5033	0.83	+0.1
5,028,646	+		GFF5033	0.83	+1.2
5,028,654	-		GFF5033	0.83	-0.1
5,028,654	-		GFF5033	0.83	+0.5
5,028,710	+		GFF5033	0.87	+0.9
5,028,713	-		GFF5033	0.88	-0.1
5,028,715	+		GFF5033	0.88	+0.2
5,028,715	+		GFF5033	0.88	+0.7
5,028,718	-		GFF5033	0.88	+1.2
5,028,723	-		GFF5033	0.88	-0.0
5,028,723	-		GFF5033	0.88	-0.1
5,028,723	-		GFF5033	0.88	-0.9
5,028,730	+		GFF5033	0.89	-0.2
5,028,738	-		GFF5033	0.89	+0.4
5,028,769	-				+1.8
5,028,785	-				-0.1
5,028,785	-				-0.5
5,028,785	-				-0.5
5,028,787	+				+0.8
5,028,874	-				-1.6
5,028,911	+				-0.4
5,029,024	-				+0.2
5,029,123	-				+0.7
5,029,145	+		GFF5034	0.11	-0.2
5,029,158	-		GFF5034	0.12	+0.4
5,029,158	-		GFF5034	0.12	-0.0
5,029,227	+		GFF5034	0.18	-1.9
5,029,227	+		GFF5034	0.18	-0.8
5,029,231	+		GFF5034	0.18	-0.2
5,029,239	-		GFF5034	0.19	+0.8
5,029,267	+		GFF5034	0.22	-0.1
5,029,275	-		GFF5034	0.22	+1.4
5,029,298	+		GFF5034	0.24	+0.3
5,029,306	+		GFF5034	0.25	-1.1
5,029,306	+		GFF5034	0.25	-2.4
5,029,306	+		GFF5034	0.25	-2.1
5,029,326	-		GFF5034	0.27	+0.4
5,029,332	+		GFF5034	0.27	-2.1
5,029,340	-		GFF5034	0.28	+0.3
5,029,346	+		GFF5034	0.28	+1.6
5,029,354	-		GFF5034	0.29	+1.5
5,029,354	-		GFF5034	0.29	-0.4
5,029,357	+		GFF5034	0.29	+0.5
5,029,357	+		GFF5034	0.29	+0.1
5,029,360	-		GFF5034	0.30	+2.5
5,029,364	+		GFF5034	0.30	-1.1
5,029,365	-		GFF5034	0.30	+0.7
5,029,371	+		GFF5034	0.31	-0.3
5,029,375	+		GFF5034	0.31	-1.3
5,029,375	+		GFF5034	0.31	-0.0
5,029,389	-		GFF5034	0.32	-2.1
5,029,389	-		GFF5034	0.32	+0.4
5,029,410	-		GFF5034	0.34	-1.6
5,029,420	-		GFF5034	0.35	-0.9
5,029,436	+		GFF5034	0.36	+0.2
5,029,436	+		GFF5034	0.36	-0.3
5,029,443	+		GFF5034	0.37	+0.0
5,029,444	-		GFF5034	0.37	-0.6
5,029,444	-		GFF5034	0.37	-0.4
5,029,467	+		GFF5034	0.39	+0.5
5,029,467	+		GFF5034	0.39	-0.2
5,029,474	-		GFF5034	0.39	+0.1
5,029,475	-		GFF5034	0.40	-1.3
5,029,481	+		GFF5034	0.40	+0.1
5,029,481	+		GFF5034	0.40	+0.9
5,029,481	+		GFF5034	0.40	+1.1
5,029,486	+		GFF5034	0.41	+1.8
5,029,486	+		GFF5034	0.41	-2.1
5,029,487	-		GFF5034	0.41	+0.9
5,029,494	-		GFF5034	0.41	+1.3
5,029,494	-		GFF5034	0.41	+1.6
5,029,494	-		GFF5034	0.41	+1.3
5,029,494	-		GFF5034	0.41	+0.9
5,029,494	-		GFF5034	0.41	-0.1
5,029,494	-		GFF5034	0.41	-1.8
5,029,538	-		GFF5034	0.45	+0.5
5,029,559	+		GFF5034	0.47	-0.5
5,029,559	-		GFF5034	0.47	+0.5
5,029,613	+		GFF5034	0.52	+0.2
5,029,621	-		GFF5034	0.52	+0.4
5,029,621	-		GFF5034	0.52	-0.5
5,029,621	-		GFF5034	0.52	+1.8
5,029,636	+		GFF5034	0.54	+0.7
5,029,642	+		GFF5034	0.54	-0.2
5,029,642	+		GFF5034	0.54	+0.0
5,029,651	-		GFF5034	0.55	+0.7
5,029,651	-		GFF5034	0.55	+1.0
5,029,651	-		GFF5034	0.55	+0.8
5,029,656	-		GFF5034	0.55	+1.5
5,029,690	+		GFF5034	0.58	+0.7
5,029,710	+		GFF5034	0.60	-0.4
5,029,710	+		GFF5034	0.60	+0.9
5,029,710	+		GFF5034	0.60	+1.5
5,029,715	+		GFF5034	0.60	+0.6
5,029,715	+		GFF5034	0.60	+0.5
5,029,715	+		GFF5034	0.60	-0.9
5,029,715	+		GFF5034	0.60	+0.0
5,029,715	+		GFF5034	0.60	+0.4
5,029,715	+		GFF5034	0.60	+0.6
5,029,715	+		GFF5034	0.60	-0.0
5,029,718	-		GFF5034	0.61	+0.8
5,029,723	-		GFF5034	0.61	-0.1
5,029,723	-		GFF5034	0.61	+0.6
5,029,723	-		GFF5034	0.61	+1.2
5,029,723	-		GFF5034	0.61	+0.7
5,029,727	+		GFF5034	0.61	-0.0
5,029,728	+		GFF5034	0.62	+0.3
5,029,742	+		GFF5034	0.63	+1.1
5,029,751	-		GFF5034	0.64	+0.1
5,029,753	+		GFF5034	0.64	+0.7
5,029,753	+		GFF5034	0.64	+0.3
5,029,753	+		GFF5034	0.64	+0.7
5,029,753	+		GFF5034	0.64	+0.4
5,029,753	+		GFF5034	0.64	+0.8
5,029,753	+		GFF5034	0.64	+0.7
5,029,753	+		GFF5034	0.64	+1.0
5,029,753	+		GFF5034	0.64	+0.3
5,029,753	+		GFF5034	0.64	+0.5
5,029,753	+		GFF5034	0.64	-0.5
5,029,761	-		GFF5034	0.64	+0.5
5,029,761	-		GFF5034	0.64	-0.0
5,029,761	-		GFF5034	0.64	-0.2
5,029,761	-		GFF5034	0.64	+0.6
5,029,761	-		GFF5034	0.64	-1.6
5,029,761	-		GFF5034	0.64	-0.2
5,029,761	-		GFF5034	0.64	+1.3
5,029,761	-		GFF5034	0.64	+1.2
5,029,766	-		GFF5034	0.65	+1.1
5,029,766	-		GFF5034	0.65	-0.2
5,029,766	-		GFF5034	0.65	+1.5
5,029,790	+		GFF5034	0.67	+0.4
5,029,795	+		GFF5034	0.67	+1.3
5,029,810	-		GFF5034	0.69	+0.5
5,029,817	-		GFF5034	0.69	+0.6
5,029,817	-		GFF5034	0.69	+1.4
5,029,817	-		GFF5034	0.69	-0.3
5,029,822	-		GFF5034	0.70	+0.3
5,029,823	+		GFF5034	0.70	-0.9
5,029,824	+		GFF5034	0.70	+2.6
5,029,829	+		GFF5034	0.70	-1.7
5,029,829	+		GFF5034	0.70	+1.0
5,029,831	-		GFF5034	0.70	-0.0
5,029,835	+		GFF5034	0.71	-1.7
5,029,837	-		GFF5034	0.71	+1.8