Strain Fitness in Sphingobium sp. HT1-2 around GFF4601

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
4,592,370	+		GFF4600	0.16	-0.3
4,592,377	+		GFF4600	0.17	+0.2
4,592,410	+		GFF4600	0.19	+1.0
4,592,418	-		GFF4600	0.20	-1.1
4,592,418	-		GFF4600	0.20	-0.2
4,592,418	-		GFF4600	0.20	-0.2
4,592,418	-		GFF4600	0.20	-0.8
4,592,434	+		GFF4600	0.22	-0.3
4,592,442	-		GFF4600	0.22	-1.1
4,592,442	-		GFF4600	0.22	+0.5
4,592,454	-		GFF4600	0.23	-0.4
4,592,501	-		GFF4600	0.27	-0.3
4,592,501	-		GFF4600	0.27	-1.6
4,592,521	+		GFF4600	0.29	+0.1
4,592,529	-		GFF4600	0.30	-1.8
4,592,550	+		GFF4600	0.32	-0.9
4,592,554	-		GFF4600	0.32	-0.8
4,592,571	-		GFF4600	0.34	-2.4
4,592,601	-		GFF4600	0.36	-0.9
4,592,601	-		GFF4600	0.36	-0.7
4,592,602	-		GFF4600	0.36	-0.7
4,592,604	+		GFF4600	0.36	-0.3
4,592,604	+		GFF4600	0.36	-0.3
4,592,604	+		GFF4600	0.36	+1.2
4,592,604	+		GFF4600	0.36	-0.6
4,592,604	+		GFF4600	0.36	+1.0
4,592,604	+		GFF4600	0.36	+0.0
4,592,604	+		GFF4600	0.36	+0.0
4,592,604	+		GFF4600	0.36	-0.2
4,592,604	+		GFF4600	0.36	-0.7
4,592,604	+		GFF4600	0.36	-0.9
4,592,604	+		GFF4600	0.36	+0.6
4,592,604	+		GFF4600	0.36	+0.6
4,592,604	+		GFF4600	0.36	+1.3
4,592,604	+		GFF4600	0.36	+0.1
4,592,604	+		GFF4600	0.36	-1.0
4,592,604	+		GFF4600	0.36	-0.2
4,592,604	+		GFF4600	0.36	-0.9
4,592,604	+		GFF4600	0.36	-0.2
4,592,604	+		GFF4600	0.36	-0.4
4,592,604	+		GFF4600	0.36	-2.5
4,592,604	+		GFF4600	0.36	-0.5
4,592,609	+		GFF4600	0.37	-1.3
4,592,612	-		GFF4600	0.37	-0.3
4,592,612	-		GFF4600	0.37	+0.3
4,592,612	-		GFF4600	0.37	-2.4
4,592,612	-		GFF4600	0.37	+0.6
4,592,612	-		GFF4600	0.37	+1.5
4,592,612	-		GFF4600	0.37	-0.0
4,592,612	-		GFF4600	0.37	-1.1
4,592,612	-		GFF4600	0.37	-2.2
4,592,612	-		GFF4600	0.37	-1.3
4,592,612	-		GFF4600	0.37	-2.4
4,592,612	-		GFF4600	0.37	-0.4
4,592,612	-		GFF4600	0.37	+0.2
4,592,612	-		GFF4600	0.37	-1.6
4,592,612	-		GFF4600	0.37	+0.2
4,592,612	-		GFF4600	0.37	-0.1
4,592,612	-		GFF4600	0.37	-0.4
4,592,612	-		GFF4600	0.37	+0.1
4,592,612	-		GFF4600	0.37	+0.7
4,592,612	-		GFF4600	0.37	+1.4
4,592,617	-		GFF4600	0.38	-0.2
4,592,617	-		GFF4600	0.38	+0.5
4,592,624	+		GFF4600	0.38	+0.0
4,592,624	+		GFF4600	0.38	+0.2
4,592,658	-		GFF4600	0.41	+0.2
4,592,676	-		GFF4600	0.43	+1.1
4,592,676	-		GFF4600	0.43	-0.9
4,592,681	+		GFF4600	0.43	-2.0
4,592,681	+		GFF4600	0.43	-0.4
4,592,681	+		GFF4600	0.43	+0.9
4,592,689	-		GFF4600	0.44	-1.3
4,592,689	-		GFF4600	0.44	-1.8
4,592,696	+		GFF4600	0.44	-1.1
4,592,697	-		GFF4600	0.44	+0.6
4,592,758	+		GFF4600	0.50	+0.6
4,592,766	-		GFF4600	0.50	-1.0
4,592,766	-		GFF4600	0.50	-0.5
4,592,773	+		GFF4600	0.51	-1.2
4,592,773	+		GFF4600	0.51	+0.4
4,592,774	-		GFF4600	0.51	-0.8
4,592,774	-		GFF4600	0.51	-0.3
4,592,779	-		GFF4600	0.52	+1.2
4,592,783	+		GFF4600	0.52	-0.9
4,592,783	+		GFF4600	0.52	-0.6
4,592,791	-		GFF4600	0.53	+0.0
4,592,796	+		GFF4600	0.53	+0.6
4,592,800	+		GFF4600	0.53	-0.3
4,592,806	-		GFF4600	0.54	+0.7
4,592,813	-		GFF4600	0.55	+1.4
4,592,835	+		GFF4600	0.56	-0.3
4,592,866	+		GFF4600	0.59	+0.7
4,592,866	+		GFF4600	0.59	-0.5
4,592,874	-		GFF4600	0.60	+0.5
4,592,874	-		GFF4600	0.60	-1.0
4,592,881	+		GFF4600	0.60	-1.4
4,592,906	-		GFF4600	0.63	+0.3
4,592,916	-		GFF4600	0.64	+0.9
4,592,933	+		GFF4600	0.65	-0.5
4,592,942	-		GFF4600	0.66	+0.1
4,592,945	+		GFF4600	0.66	-0.7
4,592,970	+		GFF4600	0.68	-0.2
4,592,982	+		GFF4600	0.69	-0.4
4,592,987	+		GFF4600	0.70	-1.1
4,592,992	+		GFF4600	0.70	-3.0
4,592,992	+		GFF4600	0.70	+0.6
4,592,992	+		GFF4600	0.70	+0.4
4,592,995	-		GFF4600	0.70	+1.0
4,593,000	-		GFF4600	0.71	-0.2
4,593,000	-		GFF4600	0.71	-1.6
4,593,000	-		GFF4600	0.71	-0.7
4,593,000	-		GFF4600	0.71	-1.8
4,593,000	-		GFF4600	0.71	-1.6
4,593,006	-		GFF4600	0.71	+0.9
4,593,012	-		GFF4600	0.72	+0.5
4,593,018	+		GFF4600	0.72	-0.1
4,593,037	-		GFF4600	0.74	-1.4
4,593,039	+		GFF4600	0.74	-0.1
4,593,044	+		GFF4600	0.75	+1.1
4,593,044	+		GFF4600	0.75	+0.3
4,593,044	+		GFF4600	0.75	-0.6
4,593,044	+		GFF4600	0.75	-0.7
4,593,049	+		GFF4600	0.75	-1.4
4,593,076	+		GFF4600	0.77	-2.8
4,593,084	-		GFF4600	0.78	+0.1
4,593,089	-		GFF4600	0.79	-0.4
4,593,093	+		GFF4600	0.79	-2.0
4,593,128	-		GFF4600	0.82	-0.3
4,593,128	-		GFF4600	0.82	-0.4
4,593,128	-		GFF4600	0.82	+0.5
4,593,128	-		GFF4600	0.82	-1.4
4,593,135	+		GFF4600	0.83	-2.2
4,593,140	+		GFF4600	0.83	-1.0
4,593,140	+		GFF4600	0.83	+0.2
4,593,145	+		GFF4600	0.83	-0.8
4,593,145	+		GFF4600	0.83	-1.4
4,593,148	-		GFF4600	0.84	-0.5
4,593,148	-		GFF4600	0.84	-0.4
4,593,159	+		GFF4600	0.85	+1.1
4,593,172	-		GFF4600	0.86	+0.5
4,593,177	+		GFF4600	0.86	-0.1
4,593,188	+		GFF4600	0.87	+0.4
4,593,188	+		GFF4600	0.87	-0.7
4,593,191	-		GFF4600	0.87	-0.3
4,593,218	-		GFF4600	0.90	+0.2
4,593,231	+				-0.3
4,593,234	+				-0.1
4,593,242	-				-1.0
4,593,272	+				-0.6
4,593,272	+				-0.7
4,593,280	-				+0.3
4,593,333	-				-0.1
4,593,337	+				-0.2
4,593,337	+				+0.7
4,593,337	+				+0.5
4,593,337	+				-0.5
4,593,345	-				+0.9
4,593,345	-				-0.4
4,593,388	-				-0.6
4,593,424	+				-0.5
4,593,424	+				+0.0
4,593,424	+				+0.2
4,593,432	-				-0.4
4,593,432	-				-0.6
4,593,432	-				+0.4
4,593,437	-				-0.4
4,593,465	+				+0.3
4,593,471	-				-2.6
4,593,471	-				+0.8
4,593,495	+				-2.3
4,593,495	+				+0.6
4,593,495	+				+0.5
4,593,495	+				-2.6
4,593,495	+				+0.1
4,593,505	+				-1.9
4,593,513	-		GFF4601	0.10	-0.5
4,593,513	-		GFF4601	0.10	+0.0
4,593,539	+		GFF4601	0.12	-1.4
4,593,540	-		GFF4601	0.12	-0.2
4,593,549	+		GFF4601	0.13	-0.1
4,593,549	+		GFF4601	0.13	-1.5
4,593,552	+		GFF4601	0.13	+0.1
4,593,560	-		GFF4601	0.13	-1.1
4,593,585	+		GFF4601	0.15	-0.8
4,593,585	+		GFF4601	0.15	-0.9
4,593,600	+		GFF4601	0.16	+0.2
4,593,600	+		GFF4601	0.16	+0.6
4,593,600	+		GFF4601	0.16	-2.4
4,593,600	+		GFF4601	0.16	-0.1
4,593,600	+		GFF4601	0.16	-0.2
4,593,600	+		GFF4601	0.16	+0.8
4,593,600	+		GFF4601	0.16	+0.1
4,593,600	+		GFF4601	0.16	-0.3
4,593,600	+		GFF4601	0.16	-0.0
4,593,600	+		GFF4601	0.16	-0.6
4,593,600	+		GFF4601	0.16	-2.0
4,593,600	+		GFF4601	0.16	+0.1
4,593,600	+		GFF4601	0.16	-1.1
4,593,608	-		GFF4601	0.16	-1.7
4,593,608	-		GFF4601	0.16	-0.9
4,593,608	-		GFF4601	0.16	-0.1
4,593,608	-		GFF4601	0.16	-0.0
4,593,608	-		GFF4601	0.16	+0.6
4,593,608	-		GFF4601	0.16	-1.5
4,593,608	-		GFF4601	0.16	-0.3
4,593,616	+		GFF4601	0.17	-0.4
4,593,616	+		GFF4601	0.17	-0.3
4,593,616	+		GFF4601	0.17	-0.7
4,593,616	+		GFF4601	0.17	-0.5
4,593,616	+		GFF4601	0.17	-0.2
4,593,618	-		GFF4601	0.17	+0.7
4,593,618	-		GFF4601	0.17	-2.4
4,593,624	-		GFF4601	0.17	+1.0
4,593,624	-		GFF4601	0.17	-0.7
4,593,624	-		GFF4601	0.17	+0.1
4,593,715	+		GFF4601	0.23	+0.2
4,593,734	+		GFF4601	0.24	-0.5
4,593,740	-		GFF4601	0.25	-0.7
4,593,740	-		GFF4601	0.25	+0.3
4,593,740	-		GFF4601	0.25	-0.5
4,593,742	-		GFF4601	0.25	+0.1
4,593,760	-		GFF4601	0.26	-1.6
4,593,789	-		GFF4601	0.28	+1.1
4,593,821	+		GFF4601	0.30	-1.6
4,593,829	-		GFF4601	0.30	-2.0
4,593,847	-		GFF4601	0.31	+0.5
4,593,847	-		GFF4601	0.31	+0.4
4,593,848	+		GFF4601	0.31	-1.9
4,593,852	-		GFF4601	0.32	-2.2
4,593,852	-		GFF4601	0.32	-0.4
4,593,852	-		GFF4601	0.32	-0.2
4,593,863	+		GFF4601	0.32	-3.1
4,593,871	+		GFF4601	0.33	+0.4
4,593,879	-		GFF4601	0.33	-0.8
4,593,897	+		GFF4601	0.35	+0.6
4,593,900	-		GFF4601	0.35	+0.3
4,593,902	+		GFF4601	0.35	-0.4
4,593,902	+		GFF4601	0.35	+0.1
4,593,902	+		GFF4601	0.35	+0.7
4,593,905	-		GFF4601	0.35	+0.2
4,593,910	-		GFF4601	0.35	-1.4
4,593,910	-		GFF4601	0.35	-0.2
4,593,910	-		GFF4601	0.35	-1.4
4,593,910	-		GFF4601	0.35	-1.0
4,593,910	-		GFF4601	0.35	+1.4
4,593,912	+		GFF4601	0.35	-0.9
4,593,912	+		GFF4601	0.35	-1.0
4,593,912	+		GFF4601	0.35	+0.8
4,593,922	+		GFF4601	0.36	-0.7
4,593,929	+		GFF4601	0.37	-0.5
4,593,929	+		GFF4601	0.37	-1.6
4,593,929	+		GFF4601	0.37	-1.2
4,593,932	-		GFF4601	0.37	-1.4
4,593,937	-		GFF4601	0.37	-1.5
4,593,937	-		GFF4601	0.37	-0.1
4,593,939	+		GFF4601	0.37	-0.2
4,593,947	-		GFF4601	0.38	-0.7
4,593,947	-		GFF4601	0.38	-0.6
4,593,955	-		GFF4601	0.38	-0.6
4,593,976	-		GFF4601	0.40	-1.6
4,593,999	+		GFF4601	0.41	-0.8
4,594,000	+		GFF4601	0.41	+0.5
4,594,000	+		GFF4601	0.41	-0.1
4,594,000	+		GFF4601	0.41	-0.6
4,594,000	+		GFF4601	0.41	-0.6
4,594,000	+		GFF4601	0.41	-1.4
4,594,000	+		GFF4601	0.41	-0.8
4,594,000	+		GFF4601	0.41	+0.3
4,594,008	-		GFF4601	0.42	+0.3
4,594,008	-		GFF4601	0.42	+0.0
4,594,008	-		GFF4601	0.42	-0.7
4,594,008	-		GFF4601	0.42	-0.7
4,594,008	-		GFF4601	0.42	-0.6
4,594,008	-		GFF4601	0.42	+0.1
4,594,008	-		GFF4601	0.42	-0.3
4,594,058	-		GFF4601	0.45	-0.5
4,594,058	-		GFF4601	0.45	-0.0
4,594,058	-		GFF4601	0.45	-0.3
4,594,070	+		GFF4601	0.45	+0.3
4,594,081	+		GFF4601	0.46	+0.5
4,594,089	-		GFF4601	0.47	+0.2
4,594,130	-		GFF4601	0.49	+0.2
4,594,140	-		GFF4601	0.50	+0.2
4,594,152	+		GFF4601	0.51	-0.1
4,594,152	+		GFF4601	0.51	+0.6
4,594,166	+		GFF4601	0.52	-2.8
4,594,166	+		GFF4601	0.52	-0.8
4,594,169	-		GFF4601	0.52	+0.7
4,594,174	-		GFF4601	0.52	-0.9
4,594,203	+		GFF4601	0.54	-0.9
4,594,210	+		GFF4601	0.54	-0.0
4,594,210	-		GFF4601	0.54	-0.6
4,594,218	-		GFF4601	0.55	-0.8
4,594,218	-		GFF4601	0.55	-0.1
4,594,218	-		GFF4601	0.55	-1.4
4,594,218	-		GFF4601	0.55	-1.2
4,594,261	+		GFF4601	0.58	-0.4
4,594,261	+		GFF4601	0.58	-0.4
4,594,269	-		GFF4601	0.58	-1.9
4,594,289	-		GFF4601	0.59	+0.4
4,594,304	+		GFF4601	0.60	+0.3
4,594,304	+		GFF4601	0.60	-2.0
4,594,304	+		GFF4601	0.60	-1.7
4,594,308	+		GFF4601	0.61	-1.4
4,594,308	+		GFF4601	0.61	-0.1
4,594,308	+		GFF4601	0.61	+0.5
4,594,310	+		GFF4601	0.61	+0.3
4,594,316	-		GFF4601	0.61	-0.9
4,594,370	-		GFF4601	0.64	-0.3
4,594,375	+		GFF4601	0.65	-0.5
4,594,375	-		GFF4601	0.65	-1.1
4,594,375	-		GFF4601	0.65	+1.2
4,594,396	-		GFF4601	0.66	+0.2
4,594,399	+		GFF4601	0.66	-0.2
4,594,424	+		GFF4601	0.68	-0.6
4,594,438	+		GFF4601	0.69	-1.7
4,594,448	+		GFF4601	0.69	-0.1
4,594,455	+		GFF4601	0.70	+1.1
4,594,475	+		GFF4601	0.71	+0.2
4,594,478	-		GFF4601	0.71	+1.0
4,594,492	+		GFF4601	0.72	-1.1
4,594,502	+		GFF4601	0.73	-0.1
4,594,513	-		GFF4601	0.73	-0.7
4,594,541	+		GFF4601	0.75	-0.7
4,594,546	+		GFF4601	0.76	-2.7
4,594,546	+		GFF4601	0.76	-2.8
4,594,546	+		GFF4601	0.76	-0.6
4,594,554	-		GFF4601	0.76	-1.6
4,594,554	-		GFF4601	0.76	+0.5
4,594,558	+		GFF4601	0.76	-0.1
4,594,558	+		GFF4601	0.76	-1.0
4,594,571	-		GFF4601	0.77	-1.7
4,594,584	+		GFF4601	0.78	+0.4
4,594,584	+		GFF4601	0.78	-0.8
4,594,584	+		GFF4601	0.78	-0.8
4,594,584	+		GFF4601	0.78	-0.7
4,594,589	+		GFF4601	0.78	-0.0
4,594,592	-		GFF4601	0.78	-2.3
4,594,592	-		GFF4601	0.78	-0.6
4,594,592	-		GFF4601	0.78	-1.9
4,594,592	-		GFF4601	0.78	-1.1
4,594,592	-		GFF4601	0.78	+0.3
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