Strain Fitness in Sphingobium sp. HT1-2 around GFF4446

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
4,440,208	-		GFF4445	0.54	-0.6
4,440,215	+		GFF4445	0.56	+0.9
4,440,217	+		GFF4445	0.56	+0.4
4,440,223	-		GFF4445	0.57	-0.7
4,440,236	+		GFF4445	0.59	-0.5
4,440,244	-		GFF4445	0.61	-1.3
4,440,244	-		GFF4445	0.61	-1.9
4,440,245	+		GFF4445	0.61	+0.7
4,440,260	+		GFF4445	0.63	+0.6
4,440,266	-		GFF4445	0.65	+0.2
4,440,278	-		GFF4445	0.67	-0.4
4,440,285	+		GFF4445	0.68	-0.8
4,440,325	-		GFF4445	0.75	+1.2
4,440,334	+		GFF4445	0.77	-0.6
4,440,342	-		GFF4445	0.78	-1.0
4,440,342	-		GFF4445	0.78	+0.1
4,440,360	+		GFF4445	0.81	+0.2
4,440,360	+		GFF4445	0.81	+1.9
4,440,370	+		GFF4445	0.83	-2.0
4,440,370	+		GFF4445	0.83	+1.5
4,440,373	-		GFF4445	0.83	-0.3
4,440,378	-		GFF4445	0.84	-0.6
4,440,378	-		GFF4445	0.84	+0.2
4,440,378	-		GFF4445	0.84	-1.2
4,440,382	+		GFF4445	0.85	+0.1
4,440,382	+		GFF4445	0.85	+0.4
4,440,390	-		GFF4445	0.86	+1.2
4,440,404	+		GFF4445	0.89	+0.1
4,440,404	+		GFF4445	0.89	+1.6
4,440,404	+		GFF4445	0.89	+0.1
4,440,412	-				+0.8
4,440,443	+				-0.6
4,440,459	+				+0.6
4,440,465	-				+1.2
4,440,469	-				-1.3
4,440,483	+				-0.3
4,440,483	+				+0.1
4,440,508	-				+0.2
4,440,508	-				+0.2
4,440,530	+				+1.2
4,440,530	+				-0.3
4,440,530	+				-0.8
4,440,535	+				-1.0
4,440,538	-				-0.0
4,440,540	+				+0.5
4,440,543	-				+0.3
4,440,560	-				-0.3
4,440,562	+				+1.2
4,440,563	+				+0.4
4,440,597	-				-0.3
4,440,607	+				-0.8
4,440,607	+				-0.4
4,440,607	+				-0.0
4,440,654	+				+0.5
4,440,666	-				-0.0
4,440,666	-				-0.4
4,440,683	-				+0.2
4,440,760	+				-0.2
4,440,783	-				-0.7
4,440,854	-				+1.4
4,440,854	-				+0.6
4,440,854	-				+0.6
4,440,857	+				-2.2
4,440,875	-				+0.2
4,440,875	-				-0.1
4,440,946	-				-0.5
4,440,972	-				+0.1
4,440,976	-				+0.8
4,441,050	+				+0.0
4,441,058	+				-1.6
4,441,058	-				-1.9
4,441,065	-				-0.9
4,441,179	+				+0.7
4,441,187	-				+0.5
4,441,196	-				-0.5
4,441,196	-				+0.1
4,441,201	+				-0.1
4,441,204	-				+0.1
4,441,209	-				-1.6
4,441,215	+				+0.7
4,441,223	-				-0.3
4,441,223	-				+0.0
4,441,223	-				-1.3
4,441,233	-				-0.5
4,441,270	+				+0.1
4,441,270	+				-0.9
4,441,270	+				+0.4
4,441,270	+				-0.3
4,441,278	-				+1.1
4,441,278	-				-0.5
4,441,278	-				+0.2
4,441,315	-				+0.6
4,441,356	+				+2.1
4,441,361	+				-0.4
4,441,364	-				-0.1
4,441,366	+				-0.5
4,441,371	+				+0.6
4,441,371	+				+0.6
4,441,371	+				+0.6
4,441,371	+				+0.8
4,441,371	+				-1.0
4,441,371	+				-0.2
4,441,371	+				+1.1
4,441,371	+				+0.4
4,441,379	-				+1.0
4,441,379	-				+0.5
4,441,379	-				-1.1
4,441,379	-				-1.0
4,441,379	-				-2.2
4,441,379	-				+0.2
4,441,383	+				-0.9
4,441,390	+				-0.5
4,441,390	+				-1.8
4,441,398	-				-0.1
4,441,398	-				+0.8
4,441,403	-				-1.5
4,441,403	-				-0.6
4,441,403	-				+1.9
4,441,483	-		GFF4446	0.10	+1.4
4,441,515	-		GFF4446	0.11	-0.7
4,441,516	-		GFF4446	0.12	+0.2
4,441,516	-		GFF4446	0.12	-0.6
4,441,520	+		GFF4446	0.12	+0.9
4,441,520	+		GFF4446	0.12	-0.3
4,441,520	+		GFF4446	0.12	-0.6
4,441,520	+		GFF4446	0.12	+1.4
4,441,523	-		GFF4446	0.12	+0.6
4,441,525	+		GFF4446	0.12	-0.9
4,441,526	-		GFF4446	0.12	+0.8
4,441,528	-		GFF4446	0.12	-0.0
4,441,528	-		GFF4446	0.12	-0.1
4,441,532	-		GFF4446	0.12	+1.3
4,441,553	+		GFF4446	0.13	+0.5
4,441,559	+		GFF4446	0.13	+0.4
4,441,559	+		GFF4446	0.13	+0.6
4,441,559	+		GFF4446	0.13	+0.6
4,441,559	+		GFF4446	0.13	+0.2
4,441,560	-		GFF4446	0.13	+1.3
4,441,567	-		GFF4446	0.13	-0.1
4,441,648	+		GFF4446	0.16	-0.1
4,441,669	-		GFF4446	0.17	+1.1
4,441,687	+		GFF4446	0.18	-0.8
4,441,702	-		GFF4446	0.18	-0.1
4,441,714	+		GFF4446	0.19	-0.1
4,441,722	-		GFF4446	0.19	+0.4
4,441,752	+		GFF4446	0.20	-0.2
4,441,753	-		GFF4446	0.20	+0.7
4,441,753	-		GFF4446	0.20	-0.3
4,441,763	+		GFF4446	0.21	+0.1
4,441,768	+		GFF4446	0.21	+0.8
4,441,768	+		GFF4446	0.21	+0.3
4,441,770	+		GFF4446	0.21	-0.4
4,441,770	+		GFF4446	0.21	-0.8
4,441,778	-		GFF4446	0.21	+1.4
4,441,778	-		GFF4446	0.21	-1.5
4,441,778	-		GFF4446	0.21	+1.2
4,441,778	-		GFF4446	0.21	-1.4
4,441,791	+		GFF4446	0.22	+0.4
4,441,791	+		GFF4446	0.22	-0.2
4,441,799	-		GFF4446	0.22	+0.7
4,441,799	-		GFF4446	0.22	+0.7
4,441,799	-		GFF4446	0.22	-0.9
4,441,811	-		GFF4446	0.22	-0.1
4,441,813	+		GFF4446	0.22	+1.5
4,441,813	+		GFF4446	0.22	+0.7
4,441,813	+		GFF4446	0.22	+0.1
4,441,851	-		GFF4446	0.24	-2.4
4,441,878	-		GFF4446	0.25	+0.5
4,441,878	-		GFF4446	0.25	+0.6
4,441,896	-		GFF4446	0.26	-0.5
4,441,903	-		GFF4446	0.26	-0.5
4,441,912	+		GFF4446	0.26	-0.9
4,441,943	+		GFF4446	0.27	+1.1
4,441,971	-		GFF4446	0.28	+0.9
4,441,981	+		GFF4446	0.29	-1.9
4,441,984	-		GFF4446	0.29	+0.8
4,441,989	-		GFF4446	0.29	+0.2
4,441,995	+		GFF4446	0.29	+0.2
4,442,004	-		GFF4446	0.30	+1.4
4,442,035	+		GFF4446	0.31	+0.2
4,442,041	+		GFF4446	0.31	+1.0
4,442,041	+		GFF4446	0.31	+1.1
4,442,041	+		GFF4446	0.31	+0.1
4,442,042	+		GFF4446	0.31	-1.3
4,442,050	-		GFF4446	0.31	-1.2
4,442,073	-		GFF4446	0.32	+0.5
4,442,092	+		GFF4446	0.33	+0.1
4,442,095	+		GFF4446	0.33	+0.8
4,442,097	+		GFF4446	0.33	+0.9
4,442,097	+		GFF4446	0.33	-1.6
4,442,097	+		GFF4446	0.33	-1.9
4,442,097	+		GFF4446	0.33	+0.5
4,442,100	-		GFF4446	0.33	-1.8
4,442,102	+		GFF4446	0.33	-1.5
4,442,102	+		GFF4446	0.33	-1.4
4,442,110	+		GFF4446	0.33	-0.2
4,442,110	+		GFF4446	0.33	+0.8
4,442,136	+		GFF4446	0.34	-0.4
4,442,143	+		GFF4446	0.35	-1.8
4,442,148	+		GFF4446	0.35	+0.1
4,442,148	+		GFF4446	0.35	-0.6
4,442,151	+		GFF4446	0.35	+0.6
4,442,151	+		GFF4446	0.35	+0.9
4,442,151	-		GFF4446	0.35	-0.6
4,442,151	-		GFF4446	0.35	+0.2
4,442,153	+		GFF4446	0.35	-1.9
4,442,156	-		GFF4446	0.35	-0.4
4,442,159	-		GFF4446	0.35	+0.6
4,442,161	-		GFF4446	0.35	+1.3
4,442,173	+		GFF4446	0.36	+0.4
4,442,173	+		GFF4446	0.36	-0.1
4,442,173	+		GFF4446	0.36	+0.3
4,442,173	+		GFF4446	0.36	+0.6
4,442,173	+		GFF4446	0.36	+0.7
4,442,181	-		GFF4446	0.36	-0.7
4,442,181	-		GFF4446	0.36	+0.8
4,442,209	+		GFF4446	0.37	+0.4
4,442,230	+		GFF4446	0.38	+2.1
4,442,230	+		GFF4446	0.38	+1.3
4,442,232	+		GFF4446	0.38	+1.1
4,442,265	+		GFF4446	0.39	+0.7
4,442,272	-		GFF4446	0.39	-2.0
4,442,273	-		GFF4446	0.40	+1.5
4,442,273	-		GFF4446	0.40	-0.6
4,442,275	+		GFF4446	0.40	-1.0
4,442,275	+		GFF4446	0.40	+1.2
4,442,278	-		GFF4446	0.40	-1.4
4,442,304	-		GFF4446	0.41	+0.1
4,442,319	+		GFF4446	0.41	-0.9
4,442,327	-		GFF4446	0.42	+0.6
4,442,327	-		GFF4446	0.42	-0.8
4,442,337	-		GFF4446	0.42	+0.3
4,442,349	+		GFF4446	0.42	-1.9
4,442,349	+		GFF4446	0.42	+0.2
4,442,349	+		GFF4446	0.42	+0.3
4,442,349	+		GFF4446	0.42	+0.8
4,442,349	+		GFF4446	0.42	+2.2
4,442,349	+		GFF4446	0.42	+0.5
4,442,349	+		GFF4446	0.42	+0.8
4,442,349	+		GFF4446	0.42	-0.2
4,442,357	-		GFF4446	0.43	-0.2
4,442,357	-		GFF4446	0.43	+0.2
4,442,357	-		GFF4446	0.43	-0.0
4,442,357	-		GFF4446	0.43	-0.2
4,442,377	+		GFF4446	0.43	+1.1
4,442,403	+		GFF4446	0.44	+0.1
4,442,408	+		GFF4446	0.45	+0.4
4,442,413	+		GFF4446	0.45	+1.7
4,442,418	-		GFF4446	0.45	+0.1
4,442,420	+		GFF4446	0.45	+1.1
4,442,477	-		GFF4446	0.47	+0.9
4,442,479	+		GFF4446	0.47	+1.2
4,442,508	-		GFF4446	0.48	-0.6
4,442,515	-		GFF4446	0.48	+0.2
4,442,520	-		GFF4446	0.49	+0.9
4,442,520	-		GFF4446	0.49	-0.8
4,442,526	+		GFF4446	0.49	-0.4
4,442,542	+		GFF4446	0.49	-0.4
4,442,550	-		GFF4446	0.50	+0.1
4,442,555	-		GFF4446	0.50	-1.8
4,442,560	+		GFF4446	0.50	+0.9
4,442,577	+		GFF4446	0.51	-0.6
4,442,616	+		GFF4446	0.52	+0.6
4,442,621	+		GFF4446	0.52	+0.5
4,442,623	+		GFF4446	0.52	-0.3
4,442,624	-		GFF4446	0.52	+0.4
4,442,624	-		GFF4446	0.52	+0.5
4,442,624	-		GFF4446	0.52	-1.1
4,442,636	+		GFF4446	0.53	-0.3
4,442,636	+		GFF4446	0.53	-0.8
4,442,644	-		GFF4446	0.53	-0.1
4,442,653	-		GFF4446	0.54	-0.1
4,442,653	-		GFF4446	0.54	+0.1
4,442,653	-		GFF4446	0.54	-1.5
4,442,662	+		GFF4446	0.54	+0.4
4,442,684	-		GFF4446	0.55	-1.3
4,442,717	-		GFF4446	0.56	-0.5
4,442,717	-		GFF4446	0.56	+1.6
4,442,718	+		GFF4446	0.56	-0.4
4,442,726	+		GFF4446	0.56	+1.3
4,442,734	-		GFF4446	0.57	-1.5
4,442,778	+		GFF4446	0.58	-1.2
4,442,778	-		GFF4446	0.58	+0.7
4,442,786	-		GFF4446	0.58	+0.9
4,442,793	+		GFF4446	0.59	-1.8
4,442,815	-		GFF4446	0.60	-1.1
4,442,818	+		GFF4446	0.60	+0.1
4,442,828	+		GFF4446	0.60	-0.2
4,442,836	-		GFF4446	0.60	+0.5
4,442,836	-		GFF4446	0.60	+1.1
4,442,868	+		GFF4446	0.62	-0.5
4,442,869	-		GFF4446	0.62	+0.9
4,442,871	-		GFF4446	0.62	-0.3
4,442,873	+		GFF4446	0.62	+0.6
4,442,876	-		GFF4446	0.62	-2.2
4,442,883	-		GFF4446	0.62	-1.0
4,442,884	+		GFF4446	0.62	-0.1
4,442,908	+		GFF4446	0.63	+0.2
4,442,911	-		GFF4446	0.63	-1.2
4,442,916	-		GFF4446	0.63	-1.5
4,442,930	-		GFF4446	0.64	+1.2
4,442,942	+		GFF4446	0.64	+0.9
4,442,947	+		GFF4446	0.64	-1.0
4,442,947	+		GFF4446	0.64	-0.3
4,442,952	+		GFF4446	0.65	+0.7
4,442,990	+		GFF4446	0.66	+1.6
4,442,993	-		GFF4446	0.66	+0.3
4,443,029	+		GFF4446	0.67	-1.9
4,443,052	-		GFF4446	0.68	-0.0
4,443,054	-		GFF4446	0.68	+0.2
4,443,091	-		GFF4446	0.70	+0.6
4,443,098	+		GFF4446	0.70	+1.2
4,443,106	-		GFF4446	0.70	-1.9
4,443,108	+		GFF4446	0.70	+0.6
4,443,116	-		GFF4446	0.71	+0.9
4,443,116	-		GFF4446	0.71	-0.1
4,443,116	-		GFF4446	0.71	-0.3
4,443,116	-		GFF4446	0.71	-0.5
4,443,118	+		GFF4446	0.71	-0.2
4,443,126	+		GFF4446	0.71	-0.4
4,443,126	-		GFF4446	0.71	+0.2
4,443,126	-		GFF4446	0.71	-0.1
4,443,126	-		GFF4446	0.71	+1.6
4,443,131	+		GFF4446	0.71	+0.6
4,443,131	+		GFF4446	0.71	+0.6
4,443,133	+		GFF4446	0.71	+0.4
4,443,133	+		GFF4446	0.71	-0.8
4,443,133	+		GFF4446	0.71	+1.8
4,443,139	-		GFF4446	0.72	+0.7
4,443,139	-		GFF4446	0.72	-0.8
4,443,141	-		GFF4446	0.72	-0.9
4,443,141	-		GFF4446	0.72	-0.8
4,443,141	-		GFF4446	0.72	-0.9
4,443,143	-		GFF4446	0.72	-0.9
4,443,144	-		GFF4446	0.72	-1.0
4,443,147	+		GFF4446	0.72	+0.3
4,443,160	-		GFF4446	0.72	-0.6
4,443,181	+		GFF4446	0.73	+1.1
4,443,182	+		GFF4446	0.73	+1.4
4,443,190	-		GFF4446	0.73	-1.4
4,443,216	+		GFF4446	0.74	+0.1
4,443,222	+		GFF4446	0.75	-1.3
4,443,224	-		GFF4446	0.75	-1.1
4,443,224	-		GFF4446	0.75	-1.9
4,443,227	+		GFF4446	0.75	+0.1
4,443,229	-		GFF4446	0.75	+0.2
4,443,229	-		GFF4446	0.75	+0.2
4,443,240	+		GFF4446	0.75	-0.8
4,443,240	+		GFF4446	0.75	+0.7
4,443,240	+		GFF4446	0.75	+1.3
4,443,248	-		GFF4446	0.76	-1.5
4,443,255	+		GFF4446	0.76	-1.3
4,443,257	-		GFF4446	0.76	-1.3
4,443,283	-		GFF4446	0.77	-0.1
4,443,300	+		GFF4446	0.78	+1.7
4,443,308	-		GFF4446	0.78	-0.5
4,443,308	-		GFF4446	0.78	+1.1
4,443,337	-		GFF4446	0.79	+0.6
4,443,345	-		GFF4446	0.79	+0.2
4,443,365	+		GFF4446	0.80	-0.1
4,443,379	+		GFF4446	0.80	+0.5
4,443,382	-		GFF4446	0.81	+0.1
4,443,389	-		GFF4446	0.81	-1.1
4,443,390	+		GFF4446	0.81	+0.2
4,443,400	+		GFF4446	0.81	+0.2
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4,443,403	+		GFF4446	0.81	+1.2
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4,443,448	+		GFF4446	0.83	-1.6
4,443,448	+		GFF4446	0.83	-1.1
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4,443,451	+		GFF4446	0.83	-2.7
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4,443,456	-		GFF4446	0.83	-0.9
4,443,456	-		GFF4446	0.83	-0.1
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4,443,456	-		GFF4446	0.83	-1.0
4,443,456	-		GFF4446	0.83	+0.1
4,443,456	-		GFF4446	0.83	+0.6
4,443,456	-		GFF4446	0.83	-0.3
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4,443,464	-		GFF4446	0.84	-0.2
4,443,473	+		GFF4446	0.84	+0.9
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4,443,491	-		GFF4446	0.85	-0.9
4,443,493	+		GFF4446	0.85	+0.4
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4,443,542	+		GFF4446	0.86	-0.0
4,443,561	+		GFF4446	0.87	-1.1
4,443,561	+		GFF4446	0.87	+1.8
4,443,569	-		GFF4446	0.87	+1.1
4,443,611	-		GFF4446	0.89	+0.6
4,443,633	+		GFF4446	0.90	+1.4
4,443,637	-				+0.1
4,443,685	-				+0.2
4,443,730	-				-0.3
4,443,743	-				+0.1
4,443,786	-				-1.4
4,443,818	+				+0.1
4,443,826	-				-1.4
4,443,826	-				-1.5
4,443,826	-				-1.2
4,443,826	-				-1.8
4,443,826	-				+0.1
4,443,855	+				-0.7
4,443,855	+				+0.1
4,443,855	+				+1.2
4,443,855	+				+0.4
4,443,855	+				+0.6
4,443,855	+				-1.1
4,443,855	+				-0.4
4,443,855	+				+0.2
4,443,855	+				-0.8
4,443,855	+				-0.8
4,443,855	+				+0.7
4,443,855	+				+0.4
4,443,855	+				-0.4
4,443,855	+				-0.9
4,443,863	-				+0.5
4,443,863	-				-0.1
4,443,863	-				-0.9
4,443,863	-				-0.4
4,443,863	-				-0.3
4,443,863	-				-2.0
4,443,863	-				-2.0
4,443,863	-				+0.7
4,443,863	-				+0.4
4,443,863	-				-0.5
4,443,863	-				-1.1
4,443,863	-				+0.6
4,443,863	-				-0.2
4,443,863	-				+0.3
4,443,863	-				-1.5
4,443,863	-				-1.6
4,443,863	-				-0.9
4,443,863	-				-0.6
4,443,863	-				+0.1
4,443,863	-				+0.0
4,443,863	-				-0.6
4,443,863	-				-0.7
4,443,873	-				+0.3
4,443,901	+				-1.2
4,443,909	+				+1.3
4,443,909	+				+0.5
4,443,909	+				+0.6
4,443,909	+				+0.9
4,443,909	+				+2.0
4,443,909	+				-0.9
4,443,912	-				-1.9
4,443,912	-				+0.7
4,443,917	-				-1.1
4,443,922	-				-1.2
4,443,979	-				-0.3
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4,444,061	-		GFF4447	0.20	-0.8
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4,444,080	+		GFF4447	0.23	-0.4
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4,444,096	+		GFF4447	0.25	+0.1
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4,444,127	-		GFF4447	0.30	+1.1
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4,444,148	-		GFF4447	0.33	-0.1
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4,444,186	+		GFF4447	0.38	+1.3
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4,444,201	+		GFF4447	0.40	+0.1
4,444,201	+		GFF4447	0.40	+0.4
4,444,201	+		GFF4447	0.40	-0.3
4,444,201	+		GFF4447	0.40	-0.4
4,444,201	+		GFF4447	0.40	+0.8
4,444,201	+		GFF4447	0.40	-1.4
4,444,201	+		GFF4447	0.40	+0.8
4,444,201	+		GFF4447	0.40	+1.1
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4,444,201	+		GFF4447	0.40	+1.2
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4,444,201	+		GFF4447	0.40	-0.1
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4,444,209	-		GFF4447	0.41	-1.0
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4,444,209	-		GFF4447	0.41	+0.1
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4,444,209	-		GFF4447	0.41	-1.6
4,444,209	-		GFF4447	0.41	-0.5
4,444,209	-		GFF4447	0.41	-0.1
4,444,209	-		GFF4447	0.41	+0.6
4,444,209	-		GFF4447	0.41	-2.0
4,444,209	-		GFF4447	0.41	-0.3
4,444,209	-		GFF4447	0.41	-0.5
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4,444,230	-		GFF4447	0.44	-1.1
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4,444,393	+		GFF4447	0.67	+1.1
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4,444,565	+				-0.2
4,444,565	+				+0.9
4,444,565	+				+1.2
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4,444,583	+				-1.8
4,444,583	+				+0.5
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4,444,591	-				+1.0
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4,444,674	+				-1.3
4,444,674	+				+1.4
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4,444,678	+				-0.9
4,444,678	+				+0.5
4,444,678	+				+0.2
4,444,682	-				-1.8
4,444,686	-				-1.9
4,444,686	-				+1.1
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4,444,686	-				+0.6
4,444,699	+		GFF4448	0.11	-2.5
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