Strain Fitness in Sphingobium sp. HT1-2 around GFF4391

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
4,391,186	-				+0.1
4,391,256	+				-0.6
4,391,262	+				+0.0
4,391,262	+				+0.3
4,391,262	+				+0.1
4,391,268	+				-0.5
4,391,270	-				-0.5
4,391,276	-				+0.4
4,391,288	+				-0.3
4,391,312	-				+0.6
4,391,314	+				+0.1
4,391,320	+				-0.8
4,391,337	-				-1.3
4,391,339	+				-1.1
4,391,350	+				+0.5
4,391,350	+				+0.4
4,391,357	-				-0.7
4,391,358	-				+0.8
4,391,375	+				-1.7
4,391,376	+				-0.2
4,391,382	+				-0.3
4,391,395	+				-0.3
4,391,395	+				-1.9
4,391,395	+				+0.4
4,391,395	+				+0.6
4,391,395	+				+0.1
4,391,403	-				+0.5
4,391,403	-				+0.0
4,391,403	-				+0.3
4,391,421	+				-0.7
4,391,427	+				+0.7
4,391,427	+				+0.8
4,391,432	+				+0.5
4,391,435	-				-1.2
4,391,435	-				+0.6
4,391,435	-				-1.1
4,391,438	+				-0.1
4,391,447	+				-0.8
4,391,447	+				+0.1
4,391,455	-				+0.3
4,391,455	-				-1.1
4,391,455	-				-1.7
4,391,455	-				-0.8
4,391,455	-				-1.4
4,391,455	-				+0.2
4,391,455	-				-0.6
4,391,463	-				-0.7
4,391,484	-				-0.9
4,391,520	+				-2.7
4,391,521	+				+0.8
4,391,521	+				+0.8
4,391,524	-				-2.7
4,391,529	-				-0.3
4,391,529	-				-0.1
4,391,585	+				-0.4
4,391,585	+				+0.4
4,391,585	+				-1.4
4,391,593	-				-0.3
4,391,593	-				-0.8
4,391,593	-				-1.1
4,391,595	-				-1.6
4,391,600	-				+0.4
4,391,609	-				-0.8
4,391,622	+				+0.9
4,391,630	+				-0.3
4,391,630	+				+0.4
4,391,630	+				+0.1
4,391,638	-				+0.6
4,391,638	-				+0.5
4,391,643	-				-0.2
4,391,643	-				-0.6
4,391,648	-				-1.3
4,391,660	+				-1.1
4,391,668	-				+0.5
4,391,668	-				+0.2
4,391,675	+				+0.3
4,391,695	-				+0.1
4,391,741	-				-1.2
4,391,746	-		GFF4391	0.10	-2.3
4,391,751	-		GFF4391	0.10	-1.8
4,391,755	+		GFF4391	0.11	-0.1
4,391,763	-		GFF4391	0.11	+0.1
4,391,770	+		GFF4391	0.11	+0.8
4,391,775	+		GFF4391	0.12	+0.9
4,391,790	+		GFF4391	0.12	+0.9
4,391,790	-		GFF4391	0.12	-1.6
4,391,799	-		GFF4391	0.13	+1.4
4,391,804	-		GFF4391	0.13	+0.6
4,391,804	-		GFF4391	0.13	-1.0
4,391,804	-		GFF4391	0.13	-0.8
4,391,804	-		GFF4391	0.13	-0.5
4,391,804	-		GFF4391	0.13	+0.2
4,391,804	-		GFF4391	0.13	-0.1
4,391,809	+		GFF4391	0.13	+0.4
4,391,851	+		GFF4391	0.15	-1.1
4,391,852	+		GFF4391	0.15	-0.6
4,391,855	-		GFF4391	0.15	+0.9
4,391,856	+		GFF4391	0.15	-0.8
4,391,859	-		GFF4391	0.15	-0.7
4,391,861	+		GFF4391	0.16	+0.5
4,391,861	+		GFF4391	0.16	-0.0
4,391,864	-		GFF4391	0.16	+0.1
4,391,864	-		GFF4391	0.16	-0.0
4,391,869	-		GFF4391	0.16	+0.2
4,391,891	-		GFF4391	0.17	+0.6
4,391,891	-		GFF4391	0.17	+0.2
4,391,891	-		GFF4391	0.17	-0.5
4,391,891	-		GFF4391	0.17	+0.3
4,391,893	+		GFF4391	0.17	+0.9
4,391,901	-		GFF4391	0.17	-0.5
4,391,901	-		GFF4391	0.17	-0.4
4,391,947	+		GFF4391	0.20	-0.4
4,391,956	-		GFF4391	0.20	-2.0
4,391,960	+		GFF4391	0.20	-1.3
4,391,968	+		GFF4391	0.21	-0.0
4,391,975	+		GFF4391	0.21	-0.5
4,391,975	+		GFF4391	0.21	-0.8
4,391,976	-		GFF4391	0.21	+0.0
4,391,999	-		GFF4391	0.22	-2.1
4,392,011	+		GFF4391	0.23	+0.2
4,392,015	+		GFF4391	0.23	-1.0
4,392,024	-		GFF4391	0.23	+1.4
4,392,027	-		GFF4391	0.23	-0.1
4,392,030	+		GFF4391	0.23	-0.4
4,392,040	+		GFF4391	0.24	+0.2
4,392,040	+		GFF4391	0.24	-1.4
4,392,048	-		GFF4391	0.24	-0.2
4,392,055	+		GFF4391	0.25	-0.1
4,392,059	-		GFF4391	0.25	-0.8
4,392,068	+		GFF4391	0.25	-0.8
4,392,068	+		GFF4391	0.25	-0.2
4,392,068	-		GFF4391	0.25	-1.2
4,392,071	-		GFF4391	0.25	-1.4
4,392,083	-		GFF4391	0.26	-2.1
4,392,090	-		GFF4391	0.26	-1.0
4,392,095	-		GFF4391	0.27	+0.9
4,392,098	+		GFF4391	0.27	-0.2
4,392,103	+		GFF4391	0.27	-1.1
4,392,106	-		GFF4391	0.27	-0.5
4,392,115	+		GFF4391	0.27	-1.0
4,392,115	+		GFF4391	0.27	-0.4
4,392,123	-		GFF4391	0.28	-1.4
4,392,123	-		GFF4391	0.28	-0.6
4,392,123	-		GFF4391	0.28	+1.1
4,392,123	-		GFF4391	0.28	-1.9
4,392,125	-		GFF4391	0.28	-0.2
4,392,140	+		GFF4391	0.29	-0.1
4,392,140	+		GFF4391	0.29	-0.1
4,392,140	+		GFF4391	0.29	+1.2
4,392,140	+		GFF4391	0.29	-0.6
4,392,140	+		GFF4391	0.29	-0.2
4,392,141	-		GFF4391	0.29	-1.9
4,392,148	-		GFF4391	0.29	-0.0
4,392,148	-		GFF4391	0.29	-0.3
4,392,148	-		GFF4391	0.29	+0.9
4,392,148	-		GFF4391	0.29	-0.7
4,392,148	-		GFF4391	0.29	-0.1
4,392,148	-		GFF4391	0.29	+0.1
4,392,155	+		GFF4391	0.29	+1.1
4,392,155	+		GFF4391	0.29	+0.8
4,392,155	+		GFF4391	0.29	+0.9
4,392,155	+		GFF4391	0.29	+0.7
4,392,155	+		GFF4391	0.29	-0.8
4,392,155	+		GFF4391	0.29	+0.1
4,392,163	+		GFF4391	0.30	-0.7
4,392,163	-		GFF4391	0.30	-0.0
4,392,163	-		GFF4391	0.30	+0.8
4,392,163	-		GFF4391	0.30	+0.1
4,392,163	-		GFF4391	0.30	+1.4
4,392,163	-		GFF4391	0.30	-0.2
4,392,163	-		GFF4391	0.30	-0.2
4,392,163	-		GFF4391	0.30	-0.6
4,392,165	+		GFF4391	0.30	-0.2
4,392,171	-		GFF4391	0.30	-0.5
4,392,182	-		GFF4391	0.31	-0.4
4,392,211	+		GFF4391	0.32	-2.9
4,392,219	-		GFF4391	0.32	-0.6
4,392,219	-		GFF4391	0.32	-1.0
4,392,219	-		GFF4391	0.32	-0.7
4,392,220	+		GFF4391	0.32	-0.2
4,392,229	-		GFF4391	0.33	-0.1
4,392,236	+		GFF4391	0.33	-0.5
4,392,245	-		GFF4391	0.34	-0.6
4,392,255	+		GFF4391	0.34	+0.0
4,392,262	-		GFF4391	0.34	-0.6
4,392,262	-		GFF4391	0.34	-0.0
4,392,263	-		GFF4391	0.34	-0.4
4,392,263	-		GFF4391	0.34	-0.4
4,392,263	-		GFF4391	0.34	-0.4
4,392,283	+		GFF4391	0.35	-1.0
4,392,291	-		GFF4391	0.36	+0.4
4,392,291	-		GFF4391	0.36	-1.1
4,392,295	+		GFF4391	0.36	-0.1
4,392,297	+		GFF4391	0.36	+0.1
4,392,305	+		GFF4391	0.36	+0.2
4,392,305	+		GFF4391	0.36	-0.9
4,392,305	+		GFF4391	0.36	-0.2
4,392,305	+		GFF4391	0.36	-1.4
4,392,305	+		GFF4391	0.36	-0.6
4,392,305	+		GFF4391	0.36	+0.3
4,392,305	+		GFF4391	0.36	+0.4
4,392,305	+		GFF4391	0.36	-0.0
4,392,305	+		GFF4391	0.36	-0.4
4,392,305	+		GFF4391	0.36	+0.4
4,392,305	+		GFF4391	0.36	+1.1
4,392,305	+		GFF4391	0.36	+0.4
4,392,307	+		GFF4391	0.36	-0.5
4,392,307	+		GFF4391	0.36	-0.8
4,392,307	+		GFF4391	0.36	+0.1
4,392,313	-		GFF4391	0.37	-0.7
4,392,313	-		GFF4391	0.37	-1.0
4,392,313	-		GFF4391	0.37	-0.1
4,392,313	-		GFF4391	0.37	-0.3
4,392,313	-		GFF4391	0.37	+0.9
4,392,313	-		GFF4391	0.37	-0.5
4,392,313	-		GFF4391	0.37	+0.2
4,392,315	-		GFF4391	0.37	+0.4
4,392,315	-		GFF4391	0.37	-0.2
4,392,315	-		GFF4391	0.37	+0.1
4,392,315	-		GFF4391	0.37	-0.4
4,392,330	+		GFF4391	0.38	-2.1
4,392,331	+		GFF4391	0.38	-0.2
4,392,331	+		GFF4391	0.38	-2.1
4,392,360	+		GFF4391	0.39	+0.2
4,392,367	+		GFF4391	0.39	-0.4
4,392,367	+		GFF4391	0.39	-1.6
4,392,367	+		GFF4391	0.39	-2.5
4,392,367	+		GFF4391	0.39	+0.7
4,392,367	+		GFF4391	0.39	+0.0
4,392,367	+		GFF4391	0.39	-0.3
4,392,368	-		GFF4391	0.39	+0.1
4,392,375	-		GFF4391	0.40	-0.8
4,392,375	-		GFF4391	0.40	+0.3
4,392,375	-		GFF4391	0.40	-1.0
4,392,375	-		GFF4391	0.40	-1.7
4,392,375	-		GFF4391	0.40	-2.7
4,392,381	+		GFF4391	0.40	-0.8
4,392,386	+		GFF4391	0.40	+0.9
4,392,386	+		GFF4391	0.40	-0.0
4,392,386	+		GFF4391	0.40	-1.6
4,392,386	+		GFF4391	0.40	+0.4
4,392,386	+		GFF4391	0.40	-0.5
4,392,386	+		GFF4391	0.40	-0.5
4,392,386	+		GFF4391	0.40	-0.7
4,392,386	+		GFF4391	0.40	+0.8
4,392,394	-		GFF4391	0.41	-2.0
4,392,394	-		GFF4391	0.41	-0.6
4,392,394	-		GFF4391	0.41	-2.5
4,392,394	-		GFF4391	0.41	-0.4
4,392,394	-		GFF4391	0.41	-1.4
4,392,394	-		GFF4391	0.41	-0.8
4,392,394	-		GFF4391	0.41	-1.0
4,392,394	-		GFF4391	0.41	-1.8
4,392,394	-		GFF4391	0.41	-0.4
4,392,394	-		GFF4391	0.41	-2.2
4,392,394	-		GFF4391	0.41	-0.0
4,392,445	-		GFF4391	0.43	-0.0
4,392,450	-		GFF4391	0.43	+1.3
4,392,458	-		GFF4391	0.44	+0.0
4,392,461	-		GFF4391	0.44	+0.1
4,392,497	-		GFF4391	0.45	-0.6
4,392,506	+		GFF4391	0.46	-0.4
4,392,522	-		GFF4391	0.47	+0.6
4,392,533	-		GFF4391	0.47	+1.5
4,392,545	+		GFF4391	0.48	+0.1
4,392,548	-		GFF4391	0.48	-0.6
4,392,555	+		GFF4391	0.48	+1.1
4,392,555	+		GFF4391	0.48	-0.1
4,392,555	+		GFF4391	0.48	-0.4
4,392,563	-		GFF4391	0.48	-1.0
4,392,563	-		GFF4391	0.48	+0.8
4,392,563	-		GFF4391	0.48	-0.2
4,392,563	-		GFF4391	0.48	+0.4
4,392,563	-		GFF4391	0.48	+0.9
4,392,563	-		GFF4391	0.48	-0.1
4,392,580	-		GFF4391	0.49	+1.5
4,392,611	+		GFF4391	0.51	-0.0
4,392,616	+		GFF4391	0.51	-0.6
4,392,616	+		GFF4391	0.51	-0.1
4,392,619	-		GFF4391	0.51	-1.1
4,392,619	-		GFF4391	0.51	-1.4
4,392,624	-		GFF4391	0.51	+1.5
4,392,629	-		GFF4391	0.52	-0.2
4,392,629	-		GFF4391	0.52	+1.3
4,392,665	-		GFF4391	0.53	+0.3
4,392,669	+		GFF4391	0.53	-1.1
4,392,677	-		GFF4391	0.54	-0.9
4,392,690	+		GFF4391	0.54	-0.7
4,392,714	-		GFF4391	0.56	-1.4
4,392,715	+		GFF4391	0.56	-0.7
4,392,720	+		GFF4391	0.56	+0.6
4,392,723	-		GFF4391	0.56	-1.9
4,392,723	-		GFF4391	0.56	-0.6
4,392,723	-		GFF4391	0.56	+0.1
4,392,723	-		GFF4391	0.56	-0.6
4,392,723	-		GFF4391	0.56	-0.2
4,392,723	-		GFF4391	0.56	-2.3
4,392,725	+		GFF4391	0.56	-0.9
4,392,728	-		GFF4391	0.56	-2.4
4,392,728	-		GFF4391	0.56	-1.0
4,392,728	-		GFF4391	0.56	-0.8
4,392,730	+		GFF4391	0.56	-0.2
4,392,738	-		GFF4391	0.57	-2.7
4,392,740	+		GFF4391	0.57	-2.1
4,392,742	+		GFF4391	0.57	-0.1
4,392,748	+		GFF4391	0.57	-2.1
4,392,756	-		GFF4391	0.58	-2.3
4,392,764	+		GFF4391	0.58	+0.4
4,392,764	+		GFF4391	0.58	-0.9
4,392,764	+		GFF4391	0.58	-0.2
4,392,771	-		GFF4391	0.58	-0.3
4,392,782	-		GFF4391	0.59	+0.5
4,392,784	+		GFF4391	0.59	-0.0
4,392,784	+		GFF4391	0.59	+1.2
4,392,791	-		GFF4391	0.59	-0.3
4,392,792	-		GFF4391	0.59	-1.4
4,392,792	-		GFF4391	0.59	-1.2
4,392,792	-		GFF4391	0.59	-1.4
4,392,792	-		GFF4391	0.59	-1.7
4,392,793	-		GFF4391	0.59	-0.4
4,392,812	+		GFF4391	0.60	-0.1
4,392,825	+		GFF4391	0.61	-1.0
4,392,833	-		GFF4391	0.61	-0.8
4,392,838	-		GFF4391	0.61	-2.0
4,392,856	-		GFF4391	0.62	+0.6
4,392,862	+		GFF4391	0.63	-0.4
4,392,862	+		GFF4391	0.63	-2.4
4,392,866	-		GFF4391	0.63	+0.2
4,392,870	-		GFF4391	0.63	-1.8
4,392,870	-		GFF4391	0.63	-1.4
4,392,870	-		GFF4391	0.63	+0.2
4,392,872	+		GFF4391	0.63	-0.3
4,392,881	+		GFF4391	0.63	+0.1
4,392,888	+		GFF4391	0.64	-1.3
4,392,888	+		GFF4391	0.64	-0.3
4,392,894	+		GFF4391	0.64	+0.6
4,392,894	+		GFF4391	0.64	-1.4
4,392,894	+		GFF4391	0.64	-2.4
4,392,923	-		GFF4391	0.65	-1.7
4,392,948	-		GFF4391	0.67	+0.1
4,392,948	-		GFF4391	0.67	+0.9
4,392,966	-		GFF4391	0.67	-0.3
4,392,966	-		GFF4391	0.67	-0.8
4,392,978	+		GFF4391	0.68	+0.4
4,393,002	+		GFF4391	0.69	-0.1
4,393,004	-		GFF4391	0.69	-3.1
4,393,010	+		GFF4391	0.69	-0.3
4,393,018	+		GFF4391	0.70	-1.2
4,393,018	+		GFF4391	0.70	+0.3
4,393,024	+		GFF4391	0.70	+0.4
4,393,024	+		GFF4391	0.70	-0.5
4,393,024	-		GFF4391	0.70	-1.3
4,393,024	-		GFF4391	0.70	+0.2
4,393,032	-		GFF4391	0.71	-2.0
4,393,058	+		GFF4391	0.72	-2.1
4,393,058	+		GFF4391	0.72	-2.1
4,393,058	+		GFF4391	0.72	+0.7
4,393,058	+		GFF4391	0.72	+0.4
4,393,058	+		GFF4391	0.72	-0.6
4,393,058	+		GFF4391	0.72	-0.2
4,393,058	+		GFF4391	0.72	+0.3
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