Strain Fitness in Sphingobium sp. HT1-2 around GFF4191

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
4,210,887	-		GFF4190	0.71	-0.9
4,210,927	+		GFF4190	0.73	-0.5
4,210,927	+		GFF4190	0.73	-1.3
4,210,927	+		GFF4190	0.73	-1.5
4,210,935	-		GFF4190	0.73	+0.7
4,210,955	+		GFF4190	0.74	-1.7
4,210,958	-		GFF4190	0.74	+0.3
4,210,978	-		GFF4190	0.74	-1.2
4,211,055	+		GFF4190	0.77	-1.2
4,211,236	-		GFF4190	0.84	-0.5
4,211,548	+				-1.0
4,211,604	-				+1.3
4,211,622	-				-0.4
4,211,671	-				-1.8
4,211,671	-				-3.3
4,211,671	-				-1.9
4,211,679	+				+0.3
4,211,679	+				+0.2
4,211,681	-				+0.3
4,211,687	-				-0.5
4,211,688	-				-0.4
4,211,693	-				-0.7
4,211,695	-				-1.0
4,211,713	-				-0.6
4,211,737	+				+1.2
4,211,737	+				-1.0
4,211,761	+				-1.2
4,211,761	+				-0.2
4,211,761	+				+1.6
4,211,761	+				+0.3
4,211,765	+				+0.5
4,211,771	+				-0.3
4,211,773	-				+2.3
4,211,785	+				+0.7
4,211,785	+				-0.5
4,211,793	-				+0.1
4,211,809	+				+0.1
4,211,819	+				+1.0
4,211,822	-				-0.0
4,211,829	-				+1.2
4,211,842	+				+0.8
4,211,848	-				+0.1
4,211,852	+				+0.4
4,211,852	-				+0.0
4,211,857	+				+0.4
4,211,858	-				-0.1
4,211,862	+				+0.6
4,211,876	-				-1.4
4,211,903	+				-0.1
4,211,903	+				-0.0
4,211,903	+				-0.7
4,211,911	-				+0.0
4,211,913	+				-2.4
4,211,913	+				-1.1
4,211,913	+				-2.5
4,211,913	+				+0.1
4,211,913	+				+0.2
4,211,913	+				-0.1
4,211,913	+				-1.6
4,211,913	+				-0.4
4,211,913	+				+1.3
4,211,918	+				+0.4
4,211,921	-				+0.5
4,211,921	-				-1.0
4,211,939	+				+1.6
4,211,972	+		GFF4191	0.10	-1.6
4,211,978	+		GFF4191	0.11	-0.1
4,211,978	+		GFF4191	0.11	-0.6
4,211,978	+		GFF4191	0.11	+0.1
4,211,978	+		GFF4191	0.11	-0.1
4,211,981	-		GFF4191	0.11	-2.2
4,211,986	-		GFF4191	0.11	-0.9
4,212,090	-		GFF4191	0.15	+0.7
4,212,101	+		GFF4191	0.15	-1.1
4,212,104	-		GFF4191	0.15	-0.5
4,212,115	+		GFF4191	0.16	-0.7
4,212,123	-		GFF4191	0.16	+0.6
4,212,125	+		GFF4191	0.16	-0.2
4,212,136	+		GFF4191	0.16	+0.5
4,212,142	+		GFF4191	0.17	+0.5
4,212,144	-		GFF4191	0.17	-0.0
4,212,154	+		GFF4191	0.17	-1.3
4,212,166	+		GFF4191	0.18	+1.8
4,212,166	+		GFF4191	0.18	+0.6
4,212,166	+		GFF4191	0.18	+2.1
4,212,171	+		GFF4191	0.18	+0.1
4,212,176	+		GFF4191	0.18	-0.3
4,212,204	-		GFF4191	0.19	+0.7
4,212,224	+		GFF4191	0.20	-0.7
4,212,234	+		GFF4191	0.20	-0.4
4,212,273	-		GFF4191	0.22	-1.8
4,212,273	-		GFF4191	0.22	+0.0
4,212,282	+		GFF4191	0.22	+0.1
4,212,328	+		GFF4191	0.24	-1.0
4,212,338	-		GFF4191	0.24	+0.1
4,212,351	+		GFF4191	0.25	+0.4
4,212,351	+		GFF4191	0.25	+0.5
4,212,354	-		GFF4191	0.25	-0.9
4,212,374	+		GFF4191	0.26	-0.2
4,212,388	+		GFF4191	0.26	-0.2
4,212,392	+		GFF4191	0.26	+0.2
4,212,435	-		GFF4191	0.28	-0.7
4,212,477	-		GFF4191	0.29	-0.3
4,212,510	+		GFF4191	0.31	-0.8
4,212,510	+		GFF4191	0.31	-0.8
4,212,510	+		GFF4191	0.31	-0.8
4,212,519	-		GFF4191	0.31	-0.2
4,212,519	-		GFF4191	0.31	-1.4
4,212,519	-		GFF4191	0.31	-0.9
4,212,519	-		GFF4191	0.31	+2.3
4,212,519	-		GFF4191	0.31	+0.7
4,212,526	-		GFF4191	0.31	-1.1
4,212,530	+		GFF4191	0.31	-1.1
4,212,574	-		GFF4191	0.33	+1.1
4,212,578	+		GFF4191	0.33	+1.4
4,212,578	+		GFF4191	0.33	-2.4
4,212,586	-		GFF4191	0.34	+0.3
4,212,586	-		GFF4191	0.34	-1.3
4,212,705	+		GFF4191	0.38	-0.7
4,212,713	-		GFF4191	0.38	-0.0
4,212,715	+		GFF4191	0.38	+0.1
4,212,715	+		GFF4191	0.38	+0.2
4,212,718	-		GFF4191	0.39	-0.8
4,212,763	+		GFF4191	0.40	-0.8
4,212,763	+		GFF4191	0.40	+0.5
4,212,763	+		GFF4191	0.40	-2.3
4,212,768	+		GFF4191	0.40	-0.8
4,212,771	-		GFF4191	0.41	+0.7
4,212,773	+		GFF4191	0.41	+0.7
4,212,781	+		GFF4191	0.41	+0.0
4,212,789	-		GFF4191	0.41	-0.8
4,212,789	-		GFF4191	0.41	-0.4
4,212,789	-		GFF4191	0.41	-0.6
4,212,789	-		GFF4191	0.41	+0.2
4,212,802	-		GFF4191	0.42	+0.0
4,212,808	-		GFF4191	0.42	+0.1
4,212,826	-		GFF4191	0.43	-0.2
4,212,831	-		GFF4191	0.43	-1.4
4,212,831	-		GFF4191	0.43	-0.4
4,212,831	-		GFF4191	0.43	-0.2
4,212,831	-		GFF4191	0.43	-0.7
4,212,845	+		GFF4191	0.43	+0.5
4,212,845	+		GFF4191	0.43	-1.3
4,212,845	+		GFF4191	0.43	-0.3
4,212,845	+		GFF4191	0.43	+0.1
4,212,853	-		GFF4191	0.44	-0.4
4,212,853	-		GFF4191	0.44	+0.6
4,212,866	+		GFF4191	0.44	-0.5
4,212,875	+		GFF4191	0.44	-0.8
4,212,883	+		GFF4191	0.45	+0.4
4,212,888	+		GFF4191	0.45	+0.7
4,212,907	-		GFF4191	0.46	-0.0
4,212,912	-		GFF4191	0.46	+0.8
4,212,938	-		GFF4191	0.47	-0.8
4,213,088	+		GFF4191	0.53	+0.8
4,213,108	+		GFF4191	0.53	-1.1
4,213,116	-		GFF4191	0.54	+0.1
4,213,212	+		GFF4191	0.57	+1.7
4,213,219	-		GFF4191	0.57	+1.4
4,213,233	+		GFF4191	0.58	-0.6
4,213,259	-		GFF4191	0.59	-0.5
4,213,259	-		GFF4191	0.59	+0.5
4,213,259	-		GFF4191	0.59	+0.2
4,213,275	-		GFF4191	0.60	+0.1
4,213,288	+		GFF4191	0.60	+0.7
4,213,288	+		GFF4191	0.60	+0.3
4,213,288	+		GFF4191	0.60	-1.0
4,213,288	+		GFF4191	0.60	+0.3
4,213,290	+		GFF4191	0.60	-0.5
4,213,290	+		GFF4191	0.60	-0.7
4,213,298	-		GFF4191	0.60	+0.1
4,213,302	+		GFF4191	0.61	+0.1
4,213,302	+		GFF4191	0.61	+0.9
4,213,307	+		GFF4191	0.61	-0.3
4,213,307	+		GFF4191	0.61	-0.2
4,213,307	+		GFF4191	0.61	-1.0
4,213,307	+		GFF4191	0.61	-0.2
4,213,307	+		GFF4191	0.61	-0.7
4,213,307	+		GFF4191	0.61	-0.5
4,213,307	+		GFF4191	0.61	-0.2
4,213,307	+		GFF4191	0.61	+0.5
4,213,310	-		GFF4191	0.61	+0.8
4,213,310	-		GFF4191	0.61	-0.1
4,213,312	+		GFF4191	0.61	-1.3
4,213,315	-		GFF4191	0.61	-0.1
4,213,315	-		GFF4191	0.61	-0.1
4,213,315	-		GFF4191	0.61	+0.2
4,213,320	-		GFF4191	0.61	-0.2
4,213,320	-		GFF4191	0.61	-0.1
4,213,334	-		GFF4191	0.62	-2.0
4,213,334	-		GFF4191	0.62	-0.2
4,213,355	+		GFF4191	0.63	+0.5
4,213,364	-		GFF4191	0.63	+0.1
4,213,367	+		GFF4191	0.63	-1.5
4,213,385	-		GFF4191	0.64	+0.2
4,213,390	+		GFF4191	0.64	-0.1
4,213,400	-		GFF4191	0.64	-1.0
4,213,405	+		GFF4191	0.65	-0.6
4,213,461	+		GFF4191	0.67	-2.7
4,213,473	+		GFF4191	0.67	+0.9
4,213,588	+		GFF4191	0.71	-0.5
4,213,648	+		GFF4191	0.74	+0.6
4,213,648	+		GFF4191	0.74	-1.0
4,213,648	+		GFF4191	0.74	-0.0
4,213,656	-		GFF4191	0.74	-0.8
4,213,666	-		GFF4191	0.74	-1.1
4,213,666	-		GFF4191	0.74	+0.2
4,213,666	-		GFF4191	0.74	+1.1
4,213,720	+		GFF4191	0.76	-2.2
4,213,767	+		GFF4191	0.78	-0.0
4,213,768	+		GFF4191	0.78	-0.3
4,213,795	-		GFF4191	0.79	+0.1
4,213,864	+		GFF4191	0.82	+0.5
4,213,886	+		GFF4191	0.83	+1.5
4,213,909	+		GFF4191	0.84	+0.2
4,213,909	+		GFF4191	0.84	-0.7
4,214,025	-		GFF4191	0.88	+0.7
4,214,037	-		GFF4191	0.88	+0.3
4,214,039	+		GFF4191	0.88	-1.5
4,214,047	+		GFF4191	0.89	-0.4
4,214,047	+		GFF4191	0.89	+0.2
4,214,057	+		GFF4191	0.89	+0.9
4,214,057	+		GFF4191	0.89	-0.2
4,214,063	-		GFF4191	0.89	-1.6
4,214,083	+				+1.1
4,214,083	+				-0.4
4,214,083	+				-0.3
4,214,083	+				+0.3
4,214,083	+				+0.4
4,214,091	-				-1.7
4,214,091	-				-0.2
4,214,097	+				-0.7
4,214,109	-				+0.1
4,214,136	+				-1.0
4,214,151	+				+0.6
4,214,167	-				-0.3
4,214,170	-				-1.5
4,214,172	+				+0.4
4,214,172	+				+0.4
4,214,175	-				-0.2
4,214,177	+				-1.5
4,214,177	+				+0.2
4,214,180	-				+0.5
4,214,180	-				-1.5
4,214,185	-				-0.8
4,214,185	-				+0.7
4,214,185	-				+0.1
4,214,211	-				-1.6
4,214,211	-				+0.9
4,214,211	-				-1.9
4,214,215	+				+0.4
4,214,217	+				+1.0
4,214,217	+				-0.5
4,214,247	+				+0.7
4,214,270	-				-0.5
4,214,283	-				-0.4
4,214,283	-				-0.6
4,214,290	-				+1.0
4,214,290	-				+0.4
4,214,301	+				+0.4
4,214,310	+				-2.0
4,214,313	-				+0.0
4,214,313	-				-0.5
4,214,315	+				-1.4
4,214,346	-				+0.2
4,214,346	-				+0.2
4,214,375	+				-1.7
4,214,375	+				-0.7
4,214,375	+				+0.6
4,214,375	+				-0.1
4,214,383	-				-0.5
4,214,383	-				+0.7
4,214,383	-				-1.3
4,214,383	-				+0.4
4,214,383	-				+0.9
4,214,524	+				-1.0
4,214,539	+				-0.9
4,214,575	+				+0.2
4,214,627	-				+0.4
4,214,635	-				-0.7
4,214,691	-		GFF4192	0.10	-0.4
4,214,692	+		GFF4192	0.10	+0.4
4,214,701	+		GFF4192	0.11	-1.3
4,214,768	-		GFF4192	0.14	+0.2
4,214,770	+		GFF4192	0.14	-0.3
4,214,770	+		GFF4192	0.14	-0.1
4,214,770	+		GFF4192	0.14	+0.5
4,214,770	+		GFF4192	0.14	-0.9
4,214,770	+		GFF4192	0.14	-0.8
4,214,770	+		GFF4192	0.14	-0.4
4,214,770	+		GFF4192	0.14	-1.8
4,214,770	+		GFF4192	0.14	-1.4
4,214,770	+		GFF4192	0.14	-1.0
4,214,770	+		GFF4192	0.14	-1.5
4,214,778	-		GFF4192	0.14	+0.5
4,214,778	-		GFF4192	0.14	-1.0
4,214,778	-		GFF4192	0.14	-0.9
4,214,778	-		GFF4192	0.14	-1.5
4,214,778	-		GFF4192	0.14	-0.9
4,214,778	-		GFF4192	0.14	+0.6
4,214,778	-		GFF4192	0.14	-0.7
4,214,778	-		GFF4192	0.14	-2.3
4,214,778	-		GFF4192	0.14	-1.3
4,214,778	-		GFF4192	0.14	-0.2
4,214,778	-		GFF4192	0.14	-1.0
4,214,778	-		GFF4192	0.14	-1.1
4,214,791	-		GFF4192	0.15	+0.1
4,214,791	-		GFF4192	0.15	+0.6
4,214,793	-		GFF4192	0.15	-0.7
4,214,832	-		GFF4192	0.16	-0.0
4,214,983	+		GFF4192	0.23	-0.2
4,214,985	-		GFF4192	0.23	-1.1
4,214,991	-		GFF4192	0.23	-1.4
4,215,016	+		GFF4192	0.24	-1.0
4,215,019	-		GFF4192	0.25	-2.4
4,215,024	-		GFF4192	0.25	-1.1
4,215,024	-		GFF4192	0.25	-1.6
4,215,029	+		GFF4192	0.25	+0.5
4,215,053	-		GFF4192	0.26	-1.7
4,215,063	-		GFF4192	0.27	-2.4
4,215,073	-		GFF4192	0.27	-0.3
4,215,075	-		GFF4192	0.27	-0.8
4,215,112	-		GFF4192	0.29	-1.3
4,215,161	+		GFF4192	0.31	-0.2
4,215,170	+		GFF4192	0.31	-0.8
4,215,188	+		GFF4192	0.32	-1.6
4,215,188	+		GFF4192	0.32	-1.2
4,215,196	-		GFF4192	0.32	-0.6
4,215,225	-		GFF4192	0.34	-0.7
4,215,226	-		GFF4192	0.34	-0.7
4,215,245	-		GFF4192	0.35	-2.0
4,215,245	-		GFF4192	0.35	+0.8
4,215,248	-		GFF4192	0.35	-1.9
4,215,250	+		GFF4192	0.35	-0.3
4,215,258	-		GFF4192	0.35	-0.3
4,215,258	-		GFF4192	0.35	-0.6
4,215,258	-		GFF4192	0.35	-0.5
4,215,271	-		GFF4192	0.36	-0.7
4,215,304	+		GFF4192	0.37	-0.3
4,215,304	+		GFF4192	0.37	-0.3
4,215,304	+		GFF4192	0.37	+0.1