Strain Fitness in Sphingobium sp. HT1-2 around GFF2795

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
2,828,520	-		GFF2793	0.64	-1.4
2,828,522	+		GFF2793	0.64	-0.8
2,828,523	+		GFF2793	0.64	-1.1
2,828,523	+		GFF2793	0.64	-1.5
2,828,523	-		GFF2793	0.64	-0.9
2,828,531	-		GFF2793	0.65	+0.4
2,828,553	-		GFF2793	0.67	-0.3
2,828,553	-		GFF2793	0.67	-2.8
2,828,558	+		GFF2793	0.67	-1.6
2,828,571	+		GFF2793	0.68	+0.4
2,828,573	+		GFF2793	0.68	+1.0
2,828,576	+		GFF2793	0.68	-0.5
2,828,582	-		GFF2793	0.69	-0.7
2,828,584	-		GFF2793	0.69	+0.2
2,828,607	+		GFF2793	0.71	-1.0
2,828,607	+		GFF2793	0.71	+1.1
2,828,615	-		GFF2793	0.71	-0.0
2,828,615	-		GFF2793	0.71	-0.3
2,828,615	-		GFF2793	0.71	+0.7
2,828,705	-		GFF2793	0.78	-0.5
2,828,707	+		GFF2793	0.78	-0.0
2,828,707	+		GFF2793	0.78	+1.1
2,828,713	+		GFF2793	0.79	-2.0
2,828,715	-		GFF2793	0.79	-2.2
2,828,718	-		GFF2793	0.79	-2.1
2,828,721	+		GFF2793	0.80	-0.5
2,828,721	+		GFF2793	0.80	+0.0
2,828,721	-		GFF2793	0.80	+1.7
2,828,721	-		GFF2793	0.80	-1.3
2,828,721	-		GFF2793	0.80	-0.5
2,828,721	-		GFF2793	0.80	-0.7
2,828,726	+		GFF2793	0.80	+0.9
2,828,729	-		GFF2793	0.80	-0.1
2,828,729	-		GFF2793	0.80	-1.0
2,828,731	+		GFF2793	0.80	-0.2
2,828,731	+		GFF2793	0.80	-1.2
2,828,735	+		GFF2793	0.81	-0.3
2,828,735	+		GFF2793	0.81	-0.4
2,828,735	+		GFF2793	0.81	-1.8
2,828,738	-		GFF2793	0.81	-0.8
2,828,740	+		GFF2793	0.81	-0.0
2,828,742	+		GFF2793	0.81	-1.0
2,828,743	-		GFF2793	0.81	-1.6
2,828,743	-		GFF2793	0.81	-0.1
2,828,743	-		GFF2793	0.81	-0.5
2,828,743	-		GFF2793	0.81	-0.6
2,828,748	-		GFF2793	0.82	-0.3
2,828,750	-		GFF2793	0.82	+0.2
2,828,750	-		GFF2793	0.82	-2.5
2,828,750	-		GFF2793	0.82	-0.6
2,828,750	-		GFF2793	0.82	+0.0
2,828,768	+		GFF2793	0.83	-0.2
2,828,792	+		GFF2793	0.85	+0.5
2,828,799	+		GFF2793	0.86	-0.3
2,828,800	-		GFF2793	0.86	-0.1
2,828,800	-		GFF2793	0.86	-0.2
2,828,800	-		GFF2793	0.86	-0.6
2,828,800	-		GFF2793	0.86	+0.0
2,828,800	-		GFF2793	0.86	-1.0
2,828,800	-		GFF2793	0.86	+0.0
2,828,805	-		GFF2793	0.86	-1.7
2,828,839	-		GFF2793	0.89	-1.3
2,828,842	-		GFF2793	0.89	+0.3
2,828,849	+		GFF2793	0.89	+0.3
2,828,854	+		GFF2793	0.90	-1.6
2,828,862	-				+0.2
2,828,867	-				+0.4
2,828,885	+				+1.2
2,828,889	-				-0.4
2,828,913	-				-1.3
2,828,918	-				-0.5
2,828,921	+				+1.5
2,828,926	-				-1.7
2,828,938	+				+1.5
2,828,946	-				-0.0
2,828,953	+				+1.0
2,828,961	+				+0.3
2,828,961	-				-0.1
2,828,964	+				-1.2
2,828,964	+				-0.4
2,828,967	-				-0.9
2,828,972	-				-0.5
2,828,996	+				-0.4
2,828,996	+				-0.4
2,829,004	-				-1.4
2,829,004	-				-1.6
2,829,012	-				-1.0
2,829,018	+		GFF2794	0.11	-0.3
2,829,060	-		GFF2794	0.21	-2.0
2,829,065	+		GFF2794	0.23	-0.8
2,829,065	+		GFF2794	0.23	+0.8
2,829,065	-		GFF2794	0.23	+0.5
2,829,073	+		GFF2794	0.25	-1.9
2,829,073	-		GFF2794	0.25	-0.4
2,829,073	-		GFF2794	0.25	-0.1
2,829,107	-		GFF2794	0.33	+0.4
2,829,107	-		GFF2794	0.33	+0.6
2,829,112	-		GFF2794	0.35	+0.1
2,829,122	+		GFF2794	0.37	+0.4
2,829,122	+		GFF2794	0.37	+1.4
2,829,122	+		GFF2794	0.37	-0.3
2,829,130	-		GFF2794	0.39	+0.4
2,829,139	+		GFF2794	0.41	-1.8
2,829,154	+		GFF2794	0.45	-0.1
2,829,157	-		GFF2794	0.46	+0.7
2,829,157	-		GFF2794	0.46	+0.4
2,829,159	+		GFF2794	0.47	-0.6
2,829,182	+		GFF2794	0.52	-0.7
2,829,192	-		GFF2794	0.55	-0.5
2,829,197	-		GFF2794	0.56	-0.6
2,829,197	-		GFF2794	0.56	-1.3
2,829,200	+		GFF2794	0.57	+1.1
2,829,200	-		GFF2794	0.57	-1.3
2,829,203	+		GFF2794	0.58	+0.6
2,829,214	+		GFF2794	0.61	-0.6
2,829,214	+		GFF2794	0.61	+0.6
2,829,214	+		GFF2794	0.61	-0.2
2,829,214	+		GFF2794	0.61	-1.5
2,829,222	-		GFF2794	0.63	-2.3
2,829,222	-		GFF2794	0.63	-1.0
2,829,240	+		GFF2794	0.67	+0.3
2,829,245	+		GFF2794	0.68	-0.8
2,829,253	-		GFF2794	0.70	+0.6
2,829,253	-		GFF2794	0.70	-0.9
2,829,253	-		GFF2794	0.70	-0.2
2,829,275	+		GFF2794	0.76	-0.2
2,829,283	-		GFF2794	0.78	+1.0
2,829,290	-		GFF2794	0.80	+0.3
2,829,299	+		GFF2794	0.82	-0.2
2,829,309	-		GFF2794	0.85	-0.3
2,829,342	-				+0.5
2,829,353	-				+0.0
2,829,378	-				+0.1
2,829,408	-				+0.3
2,829,423	-				-2.6
2,829,475	+				+0.2
2,829,488	-				-1.8
2,829,488	-				-0.1
2,829,504	-				-0.0
2,829,511	+				-0.6
2,829,511	+				+1.2
2,829,518	-				-1.3
2,829,524	+				-0.3
2,829,524	+				-2.3
2,829,524	+				-0.0
2,829,524	+				-2.0
2,829,530	+				-0.1
2,829,538	-				+0.5
2,829,543	-				+0.4
2,829,553	-				-0.1
2,829,560	+				+0.5
2,829,560	+				+0.8
2,829,568	-				-0.8
2,829,601	+				+0.5
2,829,607	+				-1.1
2,829,609	-				+0.4
2,829,611	+				-0.8
2,829,612	+				-1.9
2,829,619	-				-0.3
2,829,619	-				-0.2
2,829,621	+				-0.3
2,829,627	-				-0.5
2,829,635	+				+1.0
2,829,640	+				+1.0
2,829,645	+				-0.8
2,829,652	-				-0.1
2,829,661	+		GFF2795	0.10	-0.8
2,829,661	+		GFF2795	0.10	+2.0
2,829,661	+		GFF2795	0.10	-0.3
2,829,661	+		GFF2795	0.10	-1.5
2,829,663	-		GFF2795	0.10	-0.4
2,829,664	-		GFF2795	0.10	-0.4
2,829,669	-		GFF2795	0.11	+0.4
2,829,669	-		GFF2795	0.11	+0.3
2,829,669	-		GFF2795	0.11	-0.3
2,829,670	+		GFF2795	0.11	-0.5
2,829,675	+		GFF2795	0.11	+0.5
2,829,684	+		GFF2795	0.12	-2.4
2,829,692	-		GFF2795	0.12	+0.7
2,829,728	-		GFF2795	0.15	-0.3
2,829,731	-		GFF2795	0.15	+0.5
2,829,738	-		GFF2795	0.15	-0.5
2,829,738	-		GFF2795	0.15	+1.1
2,829,765	+		GFF2795	0.17	+0.7
2,829,773	+		GFF2795	0.17	+0.5
2,829,781	-		GFF2795	0.18	+1.7
2,829,800	-		GFF2795	0.19	+0.7
2,829,809	-		GFF2795	0.20	+0.8
2,829,827	+		GFF2795	0.21	+0.3
2,829,853	+		GFF2795	0.23	+0.5
2,829,854	-		GFF2795	0.23	+0.6
2,829,861	-		GFF2795	0.23	-0.1
2,829,867	+		GFF2795	0.24	-0.4
2,829,875	+		GFF2795	0.24	-0.5
2,829,875	+		GFF2795	0.24	-0.2
2,829,877	-		GFF2795	0.24	-0.6
2,829,883	-		GFF2795	0.25	-2.7
2,829,891	-		GFF2795	0.25	+1.0
2,829,924	+		GFF2795	0.27	+0.6
2,829,927	-		GFF2795	0.28	+0.6
2,829,932	+		GFF2795	0.28	+0.2
2,829,932	+		GFF2795	0.28	+0.6
2,829,932	-		GFF2795	0.28	-0.7
2,829,935	-		GFF2795	0.28	-0.6
2,829,940	+		GFF2795	0.28	+0.3
2,829,940	-		GFF2795	0.28	-1.2
2,829,940	-		GFF2795	0.28	-1.8
2,829,944	+		GFF2795	0.29	-0.0
2,829,944	+		GFF2795	0.29	-1.3
2,829,948	-		GFF2795	0.29	-0.8
2,829,948	-		GFF2795	0.29	-1.5
2,829,948	-		GFF2795	0.29	+0.3
2,829,948	-		GFF2795	0.29	-0.7
2,829,961	+		GFF2795	0.30	-1.6
2,829,969	-		GFF2795	0.30	+1.4
2,829,969	-		GFF2795	0.30	-0.8
2,829,999	-		GFF2795	0.32	+0.2
2,830,006	-		GFF2795	0.33	+0.4
2,830,006	-		GFF2795	0.33	-1.3
2,830,035	+		GFF2795	0.35	+0.1
2,830,038	-		GFF2795	0.35	-1.5
2,830,038	-		GFF2795	0.35	-1.4
2,830,043	-		GFF2795	0.35	+0.0
2,830,048	+		GFF2795	0.35	-1.2
2,830,056	-		GFF2795	0.36	+0.3
2,830,057	-		GFF2795	0.36	-0.7
2,830,113	+		GFF2795	0.40	-0.9
2,830,113	+		GFF2795	0.40	+0.0
2,830,118	+		GFF2795	0.40	-0.2
2,830,122	+		GFF2795	0.40	-0.7
2,830,122	+		GFF2795	0.40	-1.1
2,830,122	+		GFF2795	0.40	-0.4
2,830,122	+		GFF2795	0.40	-0.9
2,830,122	+		GFF2795	0.40	-0.5
2,830,122	+		GFF2795	0.40	+1.2
2,830,122	+		GFF2795	0.40	-0.8
2,830,122	+		GFF2795	0.40	-0.2
2,830,122	+		GFF2795	0.40	-0.0
2,830,122	+		GFF2795	0.40	+0.3
2,830,122	+		GFF2795	0.40	-2.3
2,830,122	+		GFF2795	0.40	+0.5
2,830,122	+		GFF2795	0.40	+0.4
2,830,122	+		GFF2795	0.40	-1.8
2,830,122	+		GFF2795	0.40	-1.5
2,830,122	+		GFF2795	0.40	+0.1
2,830,123	+		GFF2795	0.40	-1.2
2,830,123	+		GFF2795	0.40	+0.0
2,830,123	+		GFF2795	0.40	-0.7
2,830,123	+		GFF2795	0.40	-1.3
2,830,123	+		GFF2795	0.40	-0.6
2,830,123	+		GFF2795	0.40	+0.6
2,830,130	-		GFF2795	0.41	+0.9
2,830,130	-		GFF2795	0.41	-0.3
2,830,130	-		GFF2795	0.41	-1.1
2,830,130	-		GFF2795	0.41	+0.2
2,830,130	-		GFF2795	0.41	-0.6
2,830,130	-		GFF2795	0.41	-0.6
2,830,130	-		GFF2795	0.41	-0.9
2,830,131	-		GFF2795	0.41	-0.3
2,830,131	-		GFF2795	0.41	+0.6
2,830,200	+		GFF2795	0.45	+1.5
2,830,249	-		GFF2795	0.49	-0.6
2,830,249	-		GFF2795	0.49	+1.1
2,830,249	-		GFF2795	0.49	+1.4
2,830,249	-		GFF2795	0.49	-0.3
2,830,264	-		GFF2795	0.50	+1.0
2,830,284	-		GFF2795	0.51	-0.7
2,830,302	+		GFF2795	0.52	+0.0
2,830,305	-		GFF2795	0.52	+0.8
2,830,305	-		GFF2795	0.52	-1.3
2,830,350	+		GFF2795	0.55	-0.5
2,830,375	-		GFF2795	0.57	-0.8
2,830,384	+		GFF2795	0.58	-0.0
2,830,394	-		GFF2795	0.58	+0.1
2,830,414	+		GFF2795	0.60	-0.0
2,830,426	+		GFF2795	0.60	-0.2
2,830,428	-		GFF2795	0.60	+0.0
2,830,431	+		GFF2795	0.61	-0.5
2,830,438	-		GFF2795	0.61	-1.6
2,830,462	+		GFF2795	0.63	-0.2
2,830,462	+		GFF2795	0.63	-2.0
2,830,470	-		GFF2795	0.63	+0.3
2,830,506	+		GFF2795	0.66	-0.3
2,830,533	+		GFF2795	0.67	-0.2
2,830,540	+		GFF2795	0.68	-1.8
2,830,548	-		GFF2795	0.68	-0.9
2,830,548	-		GFF2795	0.68	-0.9
2,830,548	-		GFF2795	0.68	+0.0
2,830,593	-		GFF2795	0.71	+0.7
2,830,685	+		GFF2795	0.77	-1.4
2,830,685	-		GFF2795	0.77	-2.0
2,830,702	+		GFF2795	0.78	-0.2
2,830,739	+		GFF2795	0.81	+0.4
2,830,739	+		GFF2795	0.81	+1.1
2,830,744	+		GFF2795	0.81	-0.4
2,830,744	+		GFF2795	0.81	+1.4
2,830,747	-		GFF2795	0.81	+0.3
2,830,747	-		GFF2795	0.81	+0.9
2,830,747	-		GFF2795	0.81	-0.7
2,830,747	-		GFF2795	0.81	-0.4
2,830,747	-		GFF2795	0.81	+0.8
2,830,747	-		GFF2795	0.81	+0.6
2,830,747	-		GFF2795	0.81	-0.3
2,830,747	-		GFF2795	0.81	+0.4
2,830,747	-		GFF2795	0.81	-1.5
2,830,747	-		GFF2795	0.81	-0.0
2,830,752	-		GFF2795	0.82	+0.0
2,830,768	+		GFF2795	0.83	+0.3
2,830,778	+		GFF2795	0.83	-0.3
2,830,780	+		GFF2795	0.84	+0.3
2,830,780	+		GFF2795	0.84	+0.3
2,830,780	+		GFF2795	0.84	+1.2
2,830,780	+		GFF2795	0.84	+0.3
2,830,780	+		GFF2795	0.84	+0.5
2,830,788	-		GFF2795	0.84	-1.3
2,830,788	-		GFF2795	0.84	-1.6
2,830,788	-		GFF2795	0.84	-0.4
2,830,788	-		GFF2795	0.84	+0.2
2,830,788	-		GFF2795	0.84	+1.6
2,830,804	+		GFF2795	0.85	-0.3
2,830,812	-		GFF2795	0.86	+0.4
2,830,818	+		GFF2795	0.86	-1.4
2,830,818	-		GFF2795	0.86	-1.5
2,830,828	-		GFF2795	0.87	+1.0
2,830,849	+		GFF2795	0.88	+0.2
2,830,859	+		GFF2795	0.89	+1.4
2,830,862	+		GFF2795	0.89	-0.0
2,830,865	-		GFF2795	0.89	+0.0
2,830,870	-		GFF2795	0.89	+0.8
2,830,879	+				+0.3
2,830,884	+				+0.2
2,830,892	-				-0.1
2,830,940	+				-0.4
2,830,940	+				-1.3
2,830,943	-				+0.3
2,830,943	-				+0.2
2,830,950	-				+0.2
2,830,996	-				+1.0
2,830,997	-				-1.5
2,831,002	+				+1.4
2,831,010	-				-1.2
2,831,059	+				+0.3
2,831,066	+				-0.8
2,831,066	+				-1.5
2,831,067	-				-0.6
2,831,067	-				-1.1
2,831,067	-				+0.9
2,831,068	-				+0.9
2,831,074	-				+0.4
2,831,076	-				+0.3
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