Strain Fitness in Sphingobium sp. HT1-2 around GFF2630

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
2,646,710	-		GFF2627	0.31	+0.5
2,646,712	+		GFF2627	0.31	+0.4
2,646,715	-		GFF2627	0.32	-1.1
2,646,720	-		GFF2627	0.34	+1.6
2,646,728	-		GFF2627	0.36	+0.1
2,646,773	+		GFF2627	0.50	-1.7
2,646,773	-		GFF2627	0.50	-2.5
2,646,784	+		GFF2627	0.54	-1.4
2,646,795	+		GFF2627	0.57	-0.1
2,646,802	+		GFF2627	0.59	-0.3
2,646,810	-		GFF2627	0.62	-0.6
2,646,810	-		GFF2627	0.62	-0.1
2,646,882	-		GFF2627	0.84	-0.8
2,646,926	-				+0.2
2,646,954	-				+1.1
2,646,978	-				+0.0
2,647,005	+				-0.9
2,647,008	-				-0.7
2,647,025	+				-1.1
2,647,033	-				+1.1
2,647,038	+				-1.1
2,647,051	+		GFF2628	0.10	-2.4
2,647,056	+		GFF2628	0.11	-0.8
2,647,056	+		GFF2628	0.11	-2.9
2,647,065	+		GFF2628	0.12	-0.6
2,647,071	+		GFF2628	0.13	-0.2
2,647,071	+		GFF2628	0.13	-2.8
2,647,072	+		GFF2628	0.14	-0.7
2,647,079	-		GFF2628	0.15	-2.7
2,647,079	-		GFF2628	0.15	-2.5
2,647,094	-		GFF2628	0.17	-1.8
2,647,094	-		GFF2628	0.17	-2.7
2,647,101	+		GFF2628	0.19	-2.4
2,647,104	+		GFF2628	0.19	-2.0
2,647,112	-		GFF2628	0.20	-3.3
2,647,112	-		GFF2628	0.20	-0.9
2,647,135	+		GFF2628	0.24	-2.6
2,647,152	-		GFF2628	0.27	-0.5
2,647,199	+		GFF2628	0.35	-1.9
2,647,202	-		GFF2628	0.36	-0.1
2,647,212	+		GFF2628	0.37	-2.7
2,647,226	+		GFF2628	0.40	-1.5
2,647,272	-		GFF2628	0.47	-2.1
2,647,295	-		GFF2628	0.51	+0.4
2,647,300	-		GFF2628	0.52	-0.7
2,647,342	+		GFF2628	0.59	-3.0
2,647,358	-		GFF2628	0.62	-1.4
2,647,392	+		GFF2628	0.68	-2.5
2,647,420	+		GFF2628	0.72	-2.2
2,647,439	+		GFF2628	0.75	-2.8
2,647,439	+		GFF2628	0.75	-2.7
2,647,439	+		GFF2628	0.75	-1.0
2,647,460	-		GFF2628	0.79	-3.4
2,647,465	-		GFF2628	0.80	-2.7
2,647,468	+		GFF2628	0.80	-1.2
2,647,471	-		GFF2628	0.81	-1.7
2,647,475	-		GFF2628	0.81	-1.1
2,647,529	+				-2.3
2,647,547	+				-1.9
2,647,547	+				-1.6
2,647,555	-				+1.4
2,647,574	+				-1.3
2,647,579	+				-1.7
2,647,579	+				-1.3
2,647,579	+				-0.3
2,647,583	-				+1.4
2,647,587	-				+1.1
2,647,602	-		GFF2629	0.16	-0.5
2,647,607	+		GFF2629	0.20	-1.0
2,647,607	+		GFF2629	0.20	-1.4
2,647,607	+		GFF2629	0.20	-3.4
2,647,607	+		GFF2629	0.20	-0.8
2,647,615	-		GFF2629	0.27	+0.5
2,647,615	-		GFF2629	0.27	+1.7
2,647,615	-		GFF2629	0.27	+0.9
2,647,620	-		GFF2629	0.32	+1.2
2,647,622	-		GFF2629	0.33	-0.6
2,647,656	+		GFF2629	0.63	+0.4
2,647,659	-		GFF2629	0.66	+1.1
2,647,659	-		GFF2629	0.66	-2.0
2,647,659	-		GFF2629	0.66	-0.3
2,647,664	-		GFF2629	0.70	-1.1
2,647,679	-		GFF2629	0.83	-0.5
2,647,711	+				+1.2
2,647,792	-				-2.4
2,647,792	-				-1.8
2,647,792	-				-2.1
2,647,792	-				-1.6
2,647,867	-		GFF2630	0.12	-1.5
2,647,870	+		GFF2630	0.12	-2.3
2,647,871	+		GFF2630	0.12	-2.7
2,647,879	-		GFF2630	0.13	-1.9
2,647,885	-		GFF2630	0.13	-1.7
2,647,923	-		GFF2630	0.16	-2.5
2,647,943	+		GFF2630	0.17	-3.1
2,647,943	+		GFF2630	0.17	-2.0
2,647,968	+		GFF2630	0.19	-0.9
2,647,970	-		GFF2630	0.19	-2.1
2,647,975	-		GFF2630	0.19	-0.6
2,647,976	-		GFF2630	0.19	-3.1
2,647,976	-		GFF2630	0.19	-2.1
2,647,976	-		GFF2630	0.19	-2.3
2,647,986	-		GFF2630	0.20	-1.0
2,647,986	-		GFF2630	0.20	-1.6
2,648,003	-		GFF2630	0.21	-2.5
2,648,031	+		GFF2630	0.23	-0.7
2,648,031	+		GFF2630	0.23	-1.9
2,648,031	+		GFF2630	0.23	-2.7
2,648,033	+		GFF2630	0.23	-2.4
2,648,039	-		GFF2630	0.24	-3.4
2,648,039	-		GFF2630	0.24	-2.2
2,648,039	-		GFF2630	0.24	-4.4
2,648,123	+		GFF2630	0.30	-4.1
2,648,140	+		GFF2630	0.31	-2.9
2,648,140	+		GFF2630	0.31	-2.4
2,648,148	-		GFF2630	0.31	-1.9
2,648,148	-		GFF2630	0.31	-2.9
2,648,148	-		GFF2630	0.31	-1.8
2,648,148	-		GFF2630	0.31	+0.1
2,648,196	-		GFF2630	0.35	-1.5
2,648,236	+		GFF2630	0.37	-2.3
2,648,244	-		GFF2630	0.38	-2.2
2,648,258	-		GFF2630	0.39	-3.2
2,648,278	-		GFF2630	0.40	-1.5
2,648,285	+		GFF2630	0.41	-0.1
2,648,293	-		GFF2630	0.41	-3.4
2,648,308	-		GFF2630	0.42	-2.5
2,648,319	+		GFF2630	0.43	-3.4
2,648,332	-		GFF2630	0.44	+0.1
2,648,360	-		GFF2630	0.46	-2.2
2,648,369	+		GFF2630	0.46	-2.0
2,648,375	-		GFF2630	0.47	-1.2
2,648,394	+		GFF2630	0.48	-0.9
2,648,395	-		GFF2630	0.48	-2.2
2,648,418	+		GFF2630	0.50	-2.8
2,648,423	+		GFF2630	0.50	-3.4
2,648,426	-		GFF2630	0.50	-1.9
2,648,477	+		GFF2630	0.54	-2.0
2,648,484	+		GFF2630	0.54	-1.8
2,648,524	-		GFF2630	0.57	-1.7
2,648,543	+		GFF2630	0.58	-0.2
2,648,544	+		GFF2630	0.59	-1.7
2,648,544	+		GFF2630	0.59	-1.9
2,648,544	+		GFF2630	0.59	-1.2
2,648,571	+		GFF2630	0.60	-0.8
2,648,578	+		GFF2630	0.61	-1.8
2,648,578	+		GFF2630	0.61	-1.9
2,648,592	+		GFF2630	0.62	-1.4
2,648,592	+		GFF2630	0.62	-2.1
2,648,592	+		GFF2630	0.62	-2.2
2,648,600	-		GFF2630	0.62	-1.2
2,648,600	-		GFF2630	0.62	-3.6
2,648,607	+		GFF2630	0.63	-1.2
2,648,628	+		GFF2630	0.64	-1.6
2,648,628	+		GFF2630	0.64	-1.5
2,648,628	+		GFF2630	0.64	-1.7
2,648,628	+		GFF2630	0.64	-2.3
2,648,628	+		GFF2630	0.64	-1.4
2,648,628	+		GFF2630	0.64	-1.2
2,648,628	+		GFF2630	0.64	-1.0
2,648,628	+		GFF2630	0.64	-3.6
2,648,628	+		GFF2630	0.64	-2.6
2,648,636	-		GFF2630	0.65	-1.0
2,648,636	-		GFF2630	0.65	-2.7
2,648,636	-		GFF2630	0.65	-2.1
2,648,636	-		GFF2630	0.65	-2.0
2,648,636	-		GFF2630	0.65	-3.6
2,648,636	-		GFF2630	0.65	-1.7
2,648,636	-		GFF2630	0.65	-3.2
2,648,636	-		GFF2630	0.65	+0.5
2,648,636	-		GFF2630	0.65	-0.7
2,648,636	-		GFF2630	0.65	-2.1
2,648,636	-		GFF2630	0.65	-2.5
2,648,636	-		GFF2630	0.65	-1.3
2,648,636	-		GFF2630	0.65	-0.3
2,648,636	-		GFF2630	0.65	-0.9
2,648,636	-		GFF2630	0.65	-0.9
2,648,636	-		GFF2630	0.65	-2.3
2,648,636	-		GFF2630	0.65	-2.9
2,648,636	-		GFF2630	0.65	-0.6
2,648,636	-		GFF2630	0.65	-3.9
2,648,636	-		GFF2630	0.65	-0.9
2,648,636	-		GFF2630	0.65	-2.7
2,648,638	-		GFF2630	0.65	-2.5
2,648,647	+		GFF2630	0.66	-1.7
2,648,650	+		GFF2630	0.66	-3.0
2,648,651	+		GFF2630	0.66	-1.9
2,648,654	-		GFF2630	0.66	-0.3
2,648,658	-		GFF2630	0.66	-1.2
2,648,658	-		GFF2630	0.66	-2.6
2,648,659	-		GFF2630	0.66	-1.7
2,648,659	-		GFF2630	0.66	-3.0
2,648,659	-		GFF2630	0.66	-1.3
2,648,673	-		GFF2630	0.67	-1.7
2,648,673	-		GFF2630	0.67	+3.2
2,648,673	-		GFF2630	0.67	-1.8
2,648,676	+		GFF2630	0.68	-2.7
2,648,679	-		GFF2630	0.68	-0.6
2,648,685	-		GFF2630	0.68	-2.7
2,648,694	-		GFF2630	0.69	-0.6
2,648,742	+		GFF2630	0.72	+0.2
2,648,747	+		GFF2630	0.73	-1.9
2,648,747	+		GFF2630	0.73	-2.2
2,648,747	+		GFF2630	0.73	-1.0
2,648,747	+		GFF2630	0.73	-1.3
2,648,747	+		GFF2630	0.73	-1.6
2,648,747	+		GFF2630	0.73	-3.1
2,648,747	+		GFF2630	0.73	-2.9
2,648,747	+		GFF2630	0.73	+0.4
2,648,749	+		GFF2630	0.73	+0.4
2,648,749	+		GFF2630	0.73	-2.4
2,648,752	+		GFF2630	0.73	-0.6
2,648,752	+		GFF2630	0.73	-3.1
2,648,755	-		GFF2630	0.73	-3.9
2,648,755	-		GFF2630	0.73	-1.7
2,648,755	-		GFF2630	0.73	-0.8
2,648,755	-		GFF2630	0.73	-4.3
2,648,755	-		GFF2630	0.73	-1.0
2,648,757	+		GFF2630	0.73	-2.5
2,648,757	+		GFF2630	0.73	-2.0
2,648,757	-		GFF2630	0.73	-0.8
2,648,760	-		GFF2630	0.73	-2.8
2,648,760	-		GFF2630	0.73	-3.4
2,648,760	-		GFF2630	0.73	-2.3
2,648,769	+		GFF2630	0.74	-2.0
2,648,774	+		GFF2630	0.74	-0.8
2,648,776	-		GFF2630	0.75	-3.7
2,648,776	-		GFF2630	0.75	-0.9
2,648,779	+		GFF2630	0.75	-3.5
2,648,779	+		GFF2630	0.75	-1.5
2,648,779	+		GFF2630	0.75	-1.6
2,648,779	+		GFF2630	0.75	-1.7
2,648,779	+		GFF2630	0.75	+0.4
2,648,782	-		GFF2630	0.75	-1.7
2,648,782	-		GFF2630	0.75	-2.1
2,648,787	-		GFF2630	0.75	-3.3
2,648,787	-		GFF2630	0.75	-3.5
2,648,851	-		GFF2630	0.80	+0.2
2,648,861	-		GFF2630	0.80	-2.1
2,648,886	+		GFF2630	0.82	+0.1
2,648,955	-		GFF2630	0.87	-3.9
2,648,955	-		GFF2630	0.87	-1.7
2,648,962	+		GFF2630	0.87	-0.9
2,648,969	+		GFF2630	0.88	-1.3
2,648,969	+		GFF2630	0.88	-3.0
2,648,970	-		GFF2630	0.88	-1.4
2,648,974	+		GFF2630	0.88	-1.6
2,648,976	-		GFF2630	0.88	-2.1
2,648,977	-		GFF2630	0.88	-2.8
2,648,977	-		GFF2630	0.88	-2.7
2,648,977	-		GFF2630	0.88	-3.2
2,648,977	-		GFF2630	0.88	-1.3
2,648,977	-		GFF2630	0.88	+0.1
2,648,977	-		GFF2630	0.88	-1.9
2,648,977	-		GFF2630	0.88	-0.2
2,648,977	-		GFF2630	0.88	-2.7
2,648,977	-		GFF2630	0.88	-0.1
2,648,977	-		GFF2630	0.88	-2.9
2,648,977	-		GFF2630	0.88	-1.5
2,648,977	-		GFF2630	0.88	+0.0
2,648,982	-		GFF2630	0.89	-2.7
2,648,982	-		GFF2630	0.89	-3.9
2,648,982	-		GFF2630	0.89	-3.4
2,648,982	-		GFF2630	0.89	-2.2
2,649,005	+				-3.0
2,649,012	+				-3.0
2,649,013	+				-3.1
2,649,021	+				-2.0
2,649,022	+				-2.3
2,649,030	-				-3.5
2,649,037	+				-1.3
2,649,068	-				-2.5
2,649,068	-				-2.0
2,649,068	-				-2.8
2,649,068	-				-3.0
2,649,108	+				-0.4
2,649,114	-				-3.2
2,649,116	-				-3.6
2,649,116	-				-1.3
2,649,133	-				-1.6
2,649,156	+				-2.6
2,649,156	+				-3.6
2,649,156	+				-1.9
2,649,156	+				-2.1
2,649,164	-				+0.6
2,649,185	+				+1.7
2,649,260	+				+0.5
2,649,295	+				-0.2
2,649,318	+		GFF2631	0.11	+1.1
2,649,318	+		GFF2631	0.11	-1.4
2,649,326	-		GFF2631	0.12	+2.0
2,649,326	-		GFF2631	0.12	-1.2
2,649,337	+		GFF2631	0.13	+1.4
2,649,362	+		GFF2631	0.17	-1.9
2,649,362	+		GFF2631	0.17	-0.3
2,649,371	+		GFF2631	0.18	-0.9
2,649,372	+		GFF2631	0.18	-1.3
2,649,379	-		GFF2631	0.20	+0.3
2,649,403	+		GFF2631	0.23	+0.4
2,649,409	+		GFF2631	0.24	-0.4
2,649,409	+		GFF2631	0.24	-0.6
2,649,409	+		GFF2631	0.24	-1.1
2,649,417	-		GFF2631	0.25	+0.1
2,649,417	-		GFF2631	0.25	-1.9
2,649,417	-		GFF2631	0.25	-0.9
2,649,417	-		GFF2631	0.25	-1.0
2,649,417	-		GFF2631	0.25	-1.6
2,649,417	-		GFF2631	0.25	+0.1
2,649,417	-		GFF2631	0.25	-1.1
2,649,417	-		GFF2631	0.25	-0.1
2,649,417	-		GFF2631	0.25	+0.0
2,649,417	-		GFF2631	0.25	-0.5
2,649,432	-		GFF2631	0.27	+0.4
2,649,432	-		GFF2631	0.27	-0.9
2,649,466	+		GFF2631	0.32	+0.5
2,649,467	-		GFF2631	0.32	+0.2
2,649,474	-		GFF2631	0.33	+0.5
2,649,474	-		GFF2631	0.33	-1.4
2,649,506	+		GFF2631	0.38	-2.0
2,649,507	-		GFF2631	0.38	-0.1
2,649,540	+		GFF2631	0.43	-0.9
2,649,545	+		GFF2631	0.44	-0.0
2,649,548	-		GFF2631	0.44	+1.1
2,649,553	-		GFF2631	0.45	+1.2
2,649,563	-		GFF2631	0.46	+0.2
2,649,565	+		GFF2631	0.47	+0.4
2,649,566	+		GFF2631	0.47	-1.6
2,649,579	-		GFF2631	0.49	-0.6
2,649,579	-		GFF2631	0.49	+1.1
2,649,583	-		GFF2631	0.49	+0.1
2,649,603	+		GFF2631	0.52	-0.2
2,649,642	+		GFF2631	0.58	+0.5
2,649,652	+		GFF2631	0.59	-0.6
2,649,652	+		GFF2631	0.59	+0.2
2,649,652	+		GFF2631	0.59	-0.4
2,649,652	+		GFF2631	0.59	-0.8
2,649,652	+		GFF2631	0.59	-0.9
2,649,652	+		GFF2631	0.59	-0.1
2,649,652	+		GFF2631	0.59	+0.9
2,649,652	+		GFF2631	0.59	+0.3
2,649,652	+		GFF2631	0.59	+0.3
2,649,652	+		GFF2631	0.59	-2.4
2,649,652	+		GFF2631	0.59	-0.7
2,649,652	+		GFF2631	0.59	+0.7
2,649,656	-		GFF2631	0.60	+0.6
2,649,660	-		GFF2631	0.60	+0.1
2,649,660	-		GFF2631	0.60	-0.4
2,649,660	-		GFF2631	0.60	-0.7
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