Strain Fitness in Sphingobium sp. HT1-2 around GFF2601

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
2,618,570	-		GFF2600	0.54	-0.9
2,618,583	-		GFF2600	0.55	-1.8
2,618,589	-		GFF2600	0.55	-0.0
2,618,641	+		GFF2600	0.57	-1.0
2,618,641	+		GFF2600	0.57	-1.2
2,618,641	+		GFF2600	0.57	-1.6
2,618,647	+		GFF2600	0.58	+1.4
2,618,649	-		GFF2600	0.58	-0.6
2,618,649	-		GFF2600	0.58	-0.7
2,618,655	-		GFF2600	0.58	+0.1
2,618,655	-		GFF2600	0.58	+0.3
2,618,655	-		GFF2600	0.58	-0.1
2,618,674	+		GFF2600	0.59	-1.5
2,618,674	+		GFF2600	0.59	+0.8
2,618,674	+		GFF2600	0.59	+1.0
2,618,674	+		GFF2600	0.59	-1.7
2,618,677	-		GFF2600	0.59	-1.9
2,618,679	+		GFF2600	0.59	-0.3
2,618,682	-		GFF2600	0.59	-0.6
2,618,682	-		GFF2600	0.59	+0.4
2,618,682	-		GFF2600	0.59	-0.4
2,618,682	-		GFF2600	0.59	-0.2
2,618,682	-		GFF2600	0.59	+0.3
2,618,682	-		GFF2600	0.59	+0.0
2,618,682	-		GFF2600	0.59	-2.0
2,618,682	-		GFF2600	0.59	+0.7
2,618,682	-		GFF2600	0.59	+0.0
2,618,682	-		GFF2600	0.59	-0.2
2,618,682	-		GFF2600	0.59	-1.6
2,618,682	-		GFF2600	0.59	-0.7
2,618,682	-		GFF2600	0.59	+0.6
2,618,682	-		GFF2600	0.59	+1.1
2,618,687	-		GFF2600	0.60	-1.3
2,618,695	-		GFF2600	0.60	+0.5
2,618,711	+		GFF2600	0.61	-0.9
2,618,724	+		GFF2600	0.61	-0.3
2,618,762	-		GFF2600	0.63	-1.0
2,618,764	+		GFF2600	0.63	-1.2
2,618,805	+		GFF2600	0.65	-0.0
2,618,812	+		GFF2600	0.65	-2.0
2,618,820	-		GFF2600	0.66	-0.3
2,618,833	-		GFF2600	0.66	-0.5
2,618,836	+		GFF2600	0.66	-0.1
2,618,839	-		GFF2600	0.67	-2.1
2,618,839	-		GFF2600	0.67	+0.1
2,618,844	-		GFF2600	0.67	-0.1
2,618,849	-		GFF2600	0.67	-1.2
2,618,867	-		GFF2600	0.68	-0.7
2,618,872	+		GFF2600	0.68	-0.5
2,618,881	-		GFF2600	0.68	-1.2
2,618,891	+		GFF2600	0.69	-0.4
2,618,893	+		GFF2600	0.69	-0.4
2,618,914	+		GFF2600	0.70	+1.4
2,618,914	+		GFF2600	0.70	+1.3
2,618,914	+		GFF2600	0.70	-0.8
2,618,914	+		GFF2600	0.70	-0.1
2,618,914	+		GFF2600	0.70	-0.8
2,618,914	+		GFF2600	0.70	-0.4
2,618,914	+		GFF2600	0.70	-1.5
2,618,922	-		GFF2600	0.70	+0.6
2,618,922	-		GFF2600	0.70	+0.5
2,618,922	-		GFF2600	0.70	-0.4
2,618,922	-		GFF2600	0.70	-0.6
2,618,922	-		GFF2600	0.70	+0.6
2,618,922	-		GFF2600	0.70	-0.8
2,618,922	-		GFF2600	0.70	-0.4
2,618,922	-		GFF2600	0.70	-0.4
2,618,922	-		GFF2600	0.70	+0.4
2,618,923	+		GFF2600	0.70	+0.9
2,618,923	+		GFF2600	0.70	-2.1
2,618,931	-		GFF2600	0.71	-0.1
2,618,933	+		GFF2600	0.71	+0.8
2,618,933	+		GFF2600	0.71	-1.7
2,618,944	+		GFF2600	0.71	+0.7
2,618,950	+		GFF2600	0.72	+0.3
2,619,012	+		GFF2600	0.74	-0.6
2,619,019	+		GFF2600	0.75	-0.6
2,619,019	+		GFF2600	0.75	-1.2
2,619,043	-		GFF2600	0.76	-0.3
2,619,063	-		GFF2600	0.77	+0.2
2,619,071	-		GFF2600	0.77	-1.4
2,619,086	+		GFF2600	0.78	-1.1
2,619,096	+		GFF2600	0.78	-1.2
2,619,096	+		GFF2600	0.78	+0.5
2,619,096	+		GFF2600	0.78	-1.7
2,619,097	+		GFF2600	0.78	+0.3
2,619,097	+		GFF2600	0.78	+0.8
2,619,097	-		GFF2600	0.78	-1.2
2,619,099	-		GFF2600	0.78	-0.1
2,619,104	-		GFF2600	0.79	+1.0
2,619,105	-		GFF2600	0.79	+0.7
2,619,105	-		GFF2600	0.79	-0.2
2,619,105	-		GFF2600	0.79	-0.5
2,619,150	-		GFF2600	0.81	+0.6
2,619,150	-		GFF2600	0.81	-2.3
2,619,152	-		GFF2600	0.81	-0.3
2,619,166	+		GFF2600	0.82	-0.2
2,619,166	+		GFF2600	0.82	-1.0
2,619,166	+		GFF2600	0.82	+1.2
2,619,166	+		GFF2600	0.82	-0.5
2,619,171	+		GFF2600	0.82	-0.7
2,619,174	-		GFF2600	0.82	+0.1
2,619,174	-		GFF2600	0.82	-0.4
2,619,174	-		GFF2600	0.82	+1.4
2,619,174	-		GFF2600	0.82	-1.8
2,619,197	-		GFF2600	0.83	-1.1
2,619,212	+		GFF2600	0.84	-0.8
2,619,217	+		GFF2600	0.84	-0.1
2,619,225	-		GFF2600	0.84	-0.6
2,619,255	-		GFF2600	0.86	+0.5
2,619,285	+		GFF2600	0.87	-0.5
2,619,291	+		GFF2600	0.87	-0.2
2,619,293	-		GFF2600	0.87	-2.5
2,619,298	-		GFF2600	0.88	-1.2
2,619,301	-		GFF2600	0.88	-0.7
2,619,310	+		GFF2600	0.88	+0.6
2,619,310	+		GFF2600	0.88	+0.3
2,619,317	+		GFF2600	0.88	+0.2
2,619,317	+		GFF2600	0.88	-1.2
2,619,317	+		GFF2600	0.88	+0.6
2,619,317	+		GFF2600	0.88	+0.7
2,619,318	-		GFF2600	0.88	-1.7
2,619,318	-		GFF2600	0.88	+0.5
2,619,318	-		GFF2600	0.88	-1.3
2,619,325	-		GFF2600	0.89	+0.4
2,619,339	-		GFF2600	0.89	-0.4
2,619,341	-		GFF2600	0.90	-1.0
2,619,367	+				-1.4
2,619,383	-				-1.1
2,619,450	+				-1.5
2,619,472	+				-2.2
2,619,501	+				+0.0
2,619,502	-				-0.3
2,619,511	-				-0.9
2,619,572	-				-1.7
2,619,585	-				+0.0
2,619,585	-				-0.8
2,619,585	-				-0.8
2,619,585	-				-2.0
2,619,611	+				-0.4
2,619,611	+				-0.1
2,619,619	-		GFF2601	0.11	-0.0
2,619,623	+		GFF2601	0.12	-0.3
2,619,624	-		GFF2601	0.12	+0.5
2,619,624	-		GFF2601	0.12	-0.9
2,619,625	-		GFF2601	0.13	-0.6
2,619,647	+		GFF2601	0.17	+0.2
2,619,690	+		GFF2601	0.26	-0.6
2,619,690	+		GFF2601	0.26	-0.3
2,619,690	+		GFF2601	0.26	-0.2
2,619,698	-		GFF2601	0.28	-0.7
2,619,708	-		GFF2601	0.30	-1.2
2,619,711	+		GFF2601	0.31	+0.4
2,619,711	+		GFF2601	0.31	-1.9
2,619,725	+		GFF2601	0.34	-2.2
2,619,727	-		GFF2601	0.34	-1.4
2,619,743	-		GFF2601	0.38	+0.4
2,619,751	+		GFF2601	0.40	+0.2
2,619,757	+		GFF2601	0.41	-1.3
2,619,759	-		GFF2601	0.41	-0.0
2,619,759	-		GFF2601	0.41	-1.6
2,619,760	-		GFF2601	0.41	-2.0
2,619,761	+		GFF2601	0.42	+1.5
2,619,771	+		GFF2601	0.44	-0.5
2,619,793	-		GFF2601	0.49	+0.6
2,619,794	+		GFF2601	0.49	-0.8
2,619,794	+		GFF2601	0.49	-0.0
2,619,794	+		GFF2601	0.49	-1.0
2,619,802	-		GFF2601	0.50	-0.0
2,619,802	-		GFF2601	0.50	-0.8
2,619,816	-		GFF2601	0.53	+1.1
2,619,825	+		GFF2601	0.55	-1.1
2,619,830	+		GFF2601	0.56	+0.7
2,619,830	+		GFF2601	0.56	-0.7
2,619,830	+		GFF2601	0.56	+1.1
2,619,830	+		GFF2601	0.56	-0.9
2,619,831	+		GFF2601	0.57	-1.2
2,619,833	-		GFF2601	0.57	+1.0
2,619,833	-		GFF2601	0.57	-0.1
2,619,838	-		GFF2601	0.58	-2.4
2,619,838	-		GFF2601	0.58	+0.1
2,619,838	-		GFF2601	0.58	-2.4
2,619,838	-		GFF2601	0.58	-1.4
2,619,838	-		GFF2601	0.58	-0.0
2,619,838	-		GFF2601	0.58	-1.0
2,619,839	-		GFF2601	0.58	-0.5
2,619,850	+		GFF2601	0.61	-1.3
2,619,855	+		GFF2601	0.62	+0.0
2,619,863	-		GFF2601	0.63	-0.8
2,619,875	+		GFF2601	0.66	-0.6
2,619,875	+		GFF2601	0.66	-0.9
2,619,881	+		GFF2601	0.67	+0.4
2,619,886	+		GFF2601	0.68	-0.6
2,619,897	+		GFF2601	0.71	-0.9
2,619,897	+		GFF2601	0.71	+0.2
2,619,902	+		GFF2601	0.72	-0.4
2,619,902	+		GFF2601	0.72	+1.5
2,619,902	+		GFF2601	0.72	-1.1
2,619,902	+		GFF2601	0.72	-1.2
2,619,902	+		GFF2601	0.72	-0.1
2,619,905	-		GFF2601	0.72	-1.3
2,619,907	+		GFF2601	0.73	+1.0
2,619,908	-		GFF2601	0.73	-2.7
2,619,910	-		GFF2601	0.74	-2.6
2,619,910	-		GFF2601	0.74	-0.6
2,619,910	-		GFF2601	0.74	-0.8
2,619,915	-		GFF2601	0.75	-1.1
2,619,928	-		GFF2601	0.77	-2.1
2,619,928	-		GFF2601	0.77	+0.0
2,619,936	+		GFF2601	0.79	-0.9
2,619,941	+		GFF2601	0.80	-0.4
2,619,941	+		GFF2601	0.80	-1.0
2,619,941	+		GFF2601	0.80	-1.2
2,619,941	+		GFF2601	0.80	-0.2
2,619,941	+		GFF2601	0.80	+0.1
2,619,941	+		GFF2601	0.80	+0.9
2,619,941	+		GFF2601	0.80	-0.7
2,619,941	+		GFF2601	0.80	-0.4
2,619,941	+		GFF2601	0.80	+0.3
2,619,949	-		GFF2601	0.82	-0.8
2,619,949	-		GFF2601	0.82	-0.6
2,619,949	-		GFF2601	0.82	+0.1
2,619,949	-		GFF2601	0.82	-0.3
2,619,956	-		GFF2601	0.83	+0.7
2,619,960	+		GFF2601	0.84	+0.9
2,619,965	+		GFF2601	0.85	-2.0
2,619,967	+		GFF2601	0.86	-1.3
2,619,968	-		GFF2601	0.86	+1.4
2,619,968	-		GFF2601	0.86	-1.6
2,619,986	+		GFF2601	0.90	-1.3
2,619,991	+				-1.0
2,619,995	-				+0.5
2,619,996	+				-2.5
2,619,999	-				-0.9
2,620,004	-				-1.1
2,620,009	-				-0.4
2,620,009	-				-0.5
2,620,015	+				+0.7
2,620,015	+				-1.4
2,620,015	+				-0.6
2,620,015	+				-0.4
2,620,015	+				-0.6
2,620,023	-				+0.3
2,620,023	-				-0.3
2,620,023	-				+1.3
2,620,023	-				+1.2
2,620,023	-				+0.5
2,620,023	-				-1.1
2,620,023	-				-1.2
2,620,023	-				-0.0
2,620,023	-				-0.6
2,620,035	+				-0.7
2,620,035	+				-0.3
2,620,038	-				-0.7
2,620,038	-				-1.4
2,620,043	-				+0.3
2,620,044	-				+0.0
2,620,059	-				-0.9
2,620,073	+				+0.1
2,620,073	+				-1.2
2,620,074	-				+0.5
2,620,074	-				+0.8
2,620,095	-				-0.8
2,620,097	+				-2.0
2,620,097	+				+0.3
2,620,097	+				+1.2
2,620,097	+				-0.3
2,620,097	+				+1.2
2,620,097	+				+0.3
2,620,097	+				-1.5
2,620,097	+				+0.7
2,620,097	+				-0.9
2,620,097	+				+1.2
2,620,097	+				-1.4
2,620,104	+				-1.2
2,620,105	+				+0.6
2,620,105	-				+1.4
2,620,105	-				-0.7
2,620,105	-				-0.6
2,620,105	-				+0.2
2,620,105	-				-0.7
2,620,105	-				+0.0
2,620,105	-				-0.4
2,620,105	-				+1.0
2,620,105	-				+0.2
2,620,105	-				-1.3
2,620,105	-				-0.9
2,620,105	-				-2.4
2,620,105	-				-0.8
2,620,105	-				-0.6
2,620,105	-				-0.5
2,620,105	-				-0.4
2,620,105	-				-0.4
2,620,105	-				+1.3
2,620,105	-				+0.8
2,620,105	-				+0.3
2,620,113	-				-2.0
2,620,113	-				+0.1
2,620,115	+				-0.5
2,620,123	-				+0.2
2,620,161	-				+0.4
2,620,183	+				-2.2
2,620,183	+				+0.4
2,620,183	+				-1.7
2,620,183	+				+0.4
2,620,183	+				-2.1
2,620,191	-				+0.3
2,620,191	-				+1.1
2,620,201	-				+0.6
2,620,237	-				+0.6
2,620,248	+				+0.9
2,620,255	+				-1.0
2,620,256	-				+0.3
2,620,257	-				+0.0
2,620,258	-				+0.7
2,620,276	+				+0.5
2,620,276	+				-0.1
2,620,279	-				-1.2
2,620,290	+				-1.8
2,620,295	-				-1.1
2,620,321	+				-2.0
2,620,334	-				-1.1
2,620,336	+				+1.4
2,620,336	+				-1.5
2,620,336	-				-0.2
2,620,380	+				+0.5
2,620,382	+				-0.5
2,620,382	+				+1.0
2,620,400	+				-0.8
2,620,400	+				-0.3
2,620,400	+				+1.0
2,620,400	+				-1.3
2,620,400	+				+0.0
2,620,400	+				+1.0
2,620,400	+				-0.0
2,620,400	+				-1.0
2,620,400	+				-0.8
2,620,400	+				-0.1
2,620,400	+				+1.1
2,620,400	+				+0.5
2,620,400	+				+0.4
2,620,400	+				+0.6
2,620,407	+		GFF2602	0.10	-1.6
2,620,407	+		GFF2602	0.10	+0.4
2,620,408	-		GFF2602	0.10	+0.4
2,620,408	-		GFF2602	0.10	+0.6
2,620,408	-		GFF2602	0.10	-0.2
2,620,408	-		GFF2602	0.10	+0.4
2,620,408	-		GFF2602	0.10	+0.6
2,620,408	-		GFF2602	0.10	-0.3
2,620,408	-		GFF2602	0.10	-0.8
2,620,408	-		GFF2602	0.10	-0.8
2,620,408	-		GFF2602	0.10	+1.1
2,620,408	-		GFF2602	0.10	+0.6
2,620,408	-		GFF2602	0.10	-1.1
2,620,408	-		GFF2602	0.10	-0.3
2,620,408	-		GFF2602	0.10	+0.7
2,620,413	-		GFF2602	0.10	-1.3
2,620,415	-		GFF2602	0.11	+1.1
2,620,463	+		GFF2602	0.13	-1.2
2,620,503	-		GFF2602	0.15	-2.7
2,620,511	+		GFF2602	0.16	+0.4
2,620,527	-		GFF2602	0.17	-0.4
2,620,529	-		GFF2602	0.17	-0.1
2,620,529	-		GFF2602	0.17	-2.2
2,620,537	-		GFF2602	0.17	-0.1
2,620,544	+		GFF2602	0.18	+0.8
2,620,544	+		GFF2602	0.18	-1.9
2,620,544	+		GFF2602	0.18	-1.3
2,620,544	+		GFF2602	0.18	-1.5
2,620,544	+		GFF2602	0.18	-1.6
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2,620,865	+		GFF2602	0.35	-1.1
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2,620,873	-		GFF2602	0.36	-1.0
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2,620,955	-		GFF2602	0.40	-1.0
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2,620,965	-		GFF2602	0.41	-0.8
2,620,965	-		GFF2602	0.41	-2.2
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2,620,991	-		GFF2602	0.42	-0.6
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