Strain Fitness in Sphingobium sp. HT1-2 around GFF2283

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
2,308,695	-				+0.7
2,308,702	+				+0.6
2,308,706	+				-0.0
2,308,710	-				-0.8
2,308,762	+				+1.2
2,308,762	+				+0.9
2,308,762	+				-0.2
2,308,767	+				+0.6
2,308,772	+				-0.9
2,308,772	+				+0.5
2,308,780	-				+0.7
2,308,783	+				-0.5
2,308,796	+				-0.4
2,308,801	-				-0.4
2,308,808	-		GFF2282	0.11	-0.1
2,308,815	+		GFF2282	0.12	-0.2
2,308,820	+		GFF2282	0.12	+1.2
2,308,822	+		GFF2282	0.12	-0.3
2,308,823	-		GFF2282	0.12	-1.0
2,308,823	-		GFF2282	0.12	-0.3
2,308,823	-		GFF2282	0.12	+1.5
2,308,830	-		GFF2282	0.13	-1.2
2,308,830	-		GFF2282	0.13	+0.7
2,308,830	-		GFF2282	0.13	-2.0
2,308,830	-		GFF2282	0.13	-0.6
2,308,830	-		GFF2282	0.13	-0.4
2,308,873	+		GFF2282	0.18	+0.5
2,308,886	-		GFF2282	0.20	-0.1
2,308,900	-		GFF2282	0.21	+1.2
2,308,900	-		GFF2282	0.21	+1.3
2,308,974	+		GFF2282	0.30	+0.5
2,308,980	+		GFF2282	0.31	-0.1
2,308,981	-		GFF2282	0.31	+0.3
2,308,982	-		GFF2282	0.31	+0.1
2,308,986	+		GFF2282	0.31	-0.4
2,308,988	-		GFF2282	0.32	+0.6
2,308,993	-		GFF2282	0.32	+0.5
2,308,995	+		GFF2282	0.32	+0.4
2,308,995	+		GFF2282	0.32	-2.4
2,309,003	-		GFF2282	0.33	+0.7
2,309,005	+		GFF2282	0.34	+0.2
2,309,005	+		GFF2282	0.34	-1.7
2,309,007	+		GFF2282	0.34	+0.5
2,309,007	+		GFF2282	0.34	-0.2
2,309,015	+		GFF2282	0.35	+0.4
2,309,015	+		GFF2282	0.35	-0.8
2,309,015	+		GFF2282	0.35	+0.2
2,309,015	+		GFF2282	0.35	-0.2
2,309,015	+		GFF2282	0.35	-0.3
2,309,015	+		GFF2282	0.35	-0.1
2,309,015	+		GFF2282	0.35	-1.5
2,309,015	+		GFF2282	0.35	-1.1
2,309,015	+		GFF2282	0.35	+0.1
2,309,015	-		GFF2282	0.35	+0.7
2,309,023	-		GFF2282	0.36	+0.5
2,309,023	-		GFF2282	0.36	-1.3
2,309,023	-		GFF2282	0.36	+0.7
2,309,023	-		GFF2282	0.36	-0.2
2,309,023	-		GFF2282	0.36	+0.4
2,309,023	-		GFF2282	0.36	-0.0
2,309,023	-		GFF2282	0.36	-0.3
2,309,027	-		GFF2282	0.36	-0.4
2,309,040	+		GFF2282	0.38	+0.1
2,309,040	+		GFF2282	0.38	-0.7
2,309,040	+		GFF2282	0.38	-1.4
2,309,040	+		GFF2282	0.38	-0.7
2,309,040	+		GFF2282	0.38	-1.3
2,309,040	+		GFF2282	0.38	-1.0
2,309,048	-		GFF2282	0.39	+0.2
2,309,048	-		GFF2282	0.39	-0.4
2,309,048	-		GFF2282	0.39	+0.6
2,309,048	-		GFF2282	0.39	+1.1
2,309,048	-		GFF2282	0.39	+1.9
2,309,052	+		GFF2282	0.39	+1.0
2,309,053	+		GFF2282	0.39	-1.2
2,309,063	+		GFF2282	0.40	-0.3
2,309,063	+		GFF2282	0.40	-0.1
2,309,065	+		GFF2282	0.41	+0.2
2,309,071	-		GFF2282	0.41	+0.9
2,309,073	+		GFF2282	0.41	-1.0
2,309,087	+		GFF2282	0.43	+1.0
2,309,163	-		GFF2282	0.52	+1.4
2,309,174	+		GFF2282	0.53	-0.1
2,309,174	+		GFF2282	0.53	+0.0
2,309,203	-		GFF2282	0.56	-0.1
2,309,258	+		GFF2282	0.63	+1.3
2,309,265	-		GFF2282	0.64	+0.0
2,309,269	+		GFF2282	0.64	-0.7
2,309,318	-		GFF2282	0.70	+0.4
2,309,336	-		GFF2282	0.72	+0.7
2,309,379	+		GFF2282	0.77	-0.1
2,309,380	+		GFF2282	0.77	-1.1
2,309,380	+		GFF2282	0.77	-0.9
2,309,380	+		GFF2282	0.77	-0.0
2,309,380	+		GFF2282	0.77	+0.6
2,309,380	+		GFF2282	0.77	+0.4
2,309,380	+		GFF2282	0.77	-2.6
2,309,388	-		GFF2282	0.78	-0.7
2,309,388	-		GFF2282	0.78	+0.7
2,309,401	-		GFF2282	0.79	+0.2
2,309,446	+		GFF2282	0.85	-0.5
2,309,455	-		GFF2282	0.86	+0.5
2,309,511	-				+0.6
2,309,536	+				-1.3
2,309,544	-				+0.4
2,309,551	+				-0.9
2,309,555	+				-0.8
2,309,578	+				+0.3
2,309,596	-				-0.4
2,309,610	+				-1.1
2,309,610	+				-0.9
2,309,617	+				-0.5
2,309,618	-				+0.1
2,309,625	-				-1.0
2,309,632	+				-2.8
2,309,638	-				-1.0
2,309,689	+				+1.2
2,309,699	-				+0.2
2,309,703	+				+0.9
2,309,756	-				+0.1
2,309,756	-				-1.6
2,309,756	-				+0.7
2,309,763	+				-0.3
2,309,768	+				-0.2
2,309,775	+				+0.9
2,309,776	-				+0.2
2,309,788	+				+0.2
2,309,797	+		GFF2283	0.10	-0.0
2,309,797	+		GFF2283	0.10	+0.6
2,309,797	+		GFF2283	0.10	+0.4
2,309,805	-		GFF2283	0.11	-1.1
2,309,805	-		GFF2283	0.11	+0.3
2,309,805	-		GFF2283	0.11	+0.9
2,309,805	-		GFF2283	0.11	-1.0
2,309,805	-		GFF2283	0.11	+1.2
2,309,805	-		GFF2283	0.11	+0.8
2,309,810	-		GFF2283	0.12	+0.6
2,309,815	-		GFF2283	0.12	+0.3
2,309,817	+		GFF2283	0.12	+0.7
2,309,817	+		GFF2283	0.12	+1.0
2,309,819	+		GFF2283	0.12	+1.7
2,309,825	-		GFF2283	0.13	+0.5
2,309,825	-		GFF2283	0.13	+0.2
2,309,825	-		GFF2283	0.13	-0.6
2,309,860	-		GFF2283	0.16	+0.8
2,309,864	-		GFF2283	0.17	-0.2
2,309,864	-		GFF2283	0.17	-0.5
2,309,869	-		GFF2283	0.17	+1.2
2,309,869	-		GFF2283	0.17	+2.6
2,309,882	+		GFF2283	0.19	-0.6
2,309,882	+		GFF2283	0.19	-0.3
2,309,890	-		GFF2283	0.19	+2.4
2,309,890	-		GFF2283	0.19	+0.6
2,309,892	+		GFF2283	0.20	+0.3
2,309,895	-		GFF2283	0.20	-0.2
2,309,905	+		GFF2283	0.21	+1.0
2,309,937	+		GFF2283	0.24	-1.4
2,309,937	+		GFF2283	0.24	+0.1
2,309,944	+		GFF2283	0.25	-0.8
2,309,944	+		GFF2283	0.25	+0.6
2,309,946	-		GFF2283	0.25	+0.8
2,309,949	+		GFF2283	0.25	+0.4
2,309,952	-		GFF2283	0.26	+0.3
2,309,952	-		GFF2283	0.26	+0.3
2,309,957	-		GFF2283	0.26	+0.8
2,309,977	-		GFF2283	0.28	-1.5
2,310,008	+		GFF2283	0.31	-0.8
2,310,016	-		GFF2283	0.32	+0.1
2,310,036	-		GFF2283	0.34	-0.1
2,310,055	-		GFF2283	0.36	-2.1
2,310,085	-		GFF2283	0.39	-0.3
2,310,090	-		GFF2283	0.39	-0.5
2,310,090	-		GFF2283	0.39	+0.1
2,310,095	-		GFF2283	0.40	+1.5
2,310,095	-		GFF2283	0.40	+0.0
2,310,142	+		GFF2283	0.44	-1.3
2,310,173	+		GFF2283	0.48	+0.8
2,310,178	+		GFF2283	0.48	+0.3
2,310,237	+		GFF2283	0.54	-0.2
2,310,268	-		GFF2283	0.57	+0.4
2,310,270	-		GFF2283	0.57	-0.6
2,310,289	-		GFF2283	0.59	+3.0
2,310,295	+		GFF2283	0.60	-0.4
2,310,304	+		GFF2283	0.61	+0.3
2,310,304	+		GFF2283	0.61	+0.0
2,310,312	-		GFF2283	0.61	+1.1
2,310,312	-		GFF2283	0.61	-0.6
2,310,332	+		GFF2283	0.63	+0.6
2,310,332	+		GFF2283	0.63	-0.1
2,310,333	+		GFF2283	0.63	+0.8
2,310,340	-		GFF2283	0.64	+1.8
2,310,352	+		GFF2283	0.65	-0.9
2,310,352	+		GFF2283	0.65	+0.1
2,310,360	-		GFF2283	0.66	-1.6
2,310,388	+		GFF2283	0.69	+1.2
2,310,388	+		GFF2283	0.69	+0.2
2,310,393	+		GFF2283	0.69	-0.3
2,310,393	+		GFF2283	0.69	+1.1
2,310,396	-		GFF2283	0.70	-1.5
2,310,400	+		GFF2283	0.70	-2.2
2,310,401	-		GFF2283	0.70	+2.2
2,310,401	-		GFF2283	0.70	-0.5
2,310,408	-		GFF2283	0.71	-0.1
2,310,423	-		GFF2283	0.72	+1.6
2,310,425	+		GFF2283	0.73	+0.1
2,310,431	+		GFF2283	0.73	+0.8
2,310,490	-		GFF2283	0.79	+0.9
2,310,517	+		GFF2283	0.82	-0.0
2,310,525	-		GFF2283	0.82	+0.1
2,310,539	+		GFF2283	0.84	-0.0
2,310,547	-		GFF2283	0.85	+0.8
2,310,573	+		GFF2283	0.87	+0.6
2,310,573	+		GFF2283	0.87	-1.1
2,310,573	+		GFF2283	0.87	+0.2
2,310,573	+		GFF2283	0.87	+0.6
2,310,573	+		GFF2283	0.87	+1.1
2,310,573	+		GFF2283	0.87	-0.2
2,310,573	+		GFF2283	0.87	+1.0
2,310,579	+		GFF2283	0.88	-0.2
2,310,581	-		GFF2283	0.88	-0.4
2,310,581	-		GFF2283	0.88	+0.8
2,310,605	-				+0.7
2,310,639	+				-0.2
2,310,647	-				+2.2
2,310,696	+				+0.0
2,310,696	+				+0.3
2,310,755	+				-0.4
2,310,788	-				+0.2
2,310,792	+				-1.5
2,310,792	+				-1.3
2,310,792	+				+0.1
2,310,792	+				-0.2
2,310,792	+				-0.3
2,310,792	+				+0.6
2,310,792	+				+0.9
2,310,807	-				+0.5
2,310,876	+		GFF2284	0.36	+0.9
2,310,876	-		GFF2284	0.36	-0.8
2,310,884	-		GFF2284	0.40	-1.5
2,310,913	-		GFF2284	0.55	+0.8
2,310,965	+		GFF2284	0.81	+0.0
2,310,988	+				+0.3
2,310,996	+				-1.3
2,311,044	+		GFF2285	0.30	+0.3
2,311,044	+		GFF2285	0.30	-0.9
2,311,044	+		GFF2285	0.30	+0.8
2,311,044	+		GFF2285	0.30	-0.4
2,311,046	-		GFF2285	0.31	+0.8
2,311,052	-		GFF2285	0.35	-2.1
2,311,052	-		GFF2285	0.35	+0.1
2,311,083	+		GFF2285	0.56	-0.1
2,311,083	+		GFF2285	0.56	+0.3
2,311,083	+		GFF2285	0.56	-0.6
2,311,083	+		GFF2285	0.56	-1.0
2,311,091	-		GFF2285	0.61	+1.0
2,311,091	-		GFF2285	0.61	+0.2
2,311,091	-		GFF2285	0.61	+0.2
2,311,091	-		GFF2285	0.61	-0.3
2,311,091	-		GFF2285	0.61	+0.8
2,311,091	-		GFF2285	0.61	-0.1
2,311,093	-		GFF2285	0.62	+0.4
2,311,117	+		GFF2285	0.78	+0.9
2,311,117	+		GFF2285	0.78	-0.9
2,311,125	-		GFF2285	0.83	+1.9
2,311,125	-		GFF2285	0.83	+0.4
2,311,127	+		GFF2285	0.84	+0.4
2,311,139	+				-0.6
2,311,179	+				+2.7
2,311,188	+				-1.4
2,311,188	+				+0.0
2,311,188	+				+1.2
2,311,306	+				+1.0
2,311,306	+				-0.2
2,311,306	+				+0.9
2,311,306	+				+1.6
2,311,314	-				-0.8
2,311,319	-				-1.9
2,311,364	-				+0.8
2,311,398	-		GFF2286	0.10	-1.8
2,311,449	-		GFF2286	0.13	+0.7
2,311,482	-		GFF2286	0.14	-0.4
2,311,600	-		GFF2286	0.19	+0.2
2,311,600	-		GFF2286	0.19	-1.0
2,311,600	-		GFF2286	0.19	+2.2
2,311,611	-		GFF2286	0.20	-0.2
2,311,664	+		GFF2286	0.22	-0.8
2,311,673	+		GFF2286	0.22	+2.5
2,311,673	+		GFF2286	0.22	-0.3
2,311,678	+		GFF2286	0.22	+0.2
2,311,680	+		GFF2286	0.22	-1.6
2,311,681	+		GFF2286	0.23	+0.0
2,311,681	-		GFF2286	0.23	+0.6
2,311,688	-		GFF2286	0.23	+0.6