Strain Fitness in Sphingobium sp. HT1-2 around GFF1832

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
1,850,612	-		GFF1830	0.35	-1.3
1,850,619	+		GFF1830	0.36	-0.1
1,850,627	-		GFF1830	0.37	-1.0
1,850,627	-		GFF1830	0.37	-1.4
1,850,629	+		GFF1830	0.37	-1.2
1,850,639	+		GFF1830	0.38	-0.1
1,850,651	-		GFF1830	0.40	-2.4
1,850,665	+		GFF1830	0.41	-2.4
1,850,693	-		GFF1830	0.44	-1.2
1,850,694	+		GFF1830	0.45	-0.1
1,850,694	+		GFF1830	0.45	+1.1
1,850,694	+		GFF1830	0.45	-2.3
1,850,702	-		GFF1830	0.45	-1.6
1,850,702	-		GFF1830	0.45	+0.6
1,850,725	+		GFF1830	0.48	-0.2
1,850,725	+		GFF1830	0.48	+0.1
1,850,747	+		GFF1830	0.51	-0.8
1,850,768	+		GFF1830	0.53	+1.2
1,850,773	+		GFF1830	0.53	-0.3
1,850,774	-		GFF1830	0.54	+1.0
1,850,774	-		GFF1830	0.54	-0.1
1,850,776	+		GFF1830	0.54	+0.7
1,850,781	+		GFF1830	0.54	+1.5
1,850,781	+		GFF1830	0.54	-0.1
1,850,784	-		GFF1830	0.55	-1.7
1,850,784	-		GFF1830	0.55	-1.1
1,850,784	-		GFF1830	0.55	-1.5
1,850,789	-		GFF1830	0.55	-1.6
1,850,794	-		GFF1830	0.56	-0.1
1,850,842	+		GFF1830	0.61	+1.0
1,850,859	-		GFF1830	0.63	-0.6
1,850,862	+		GFF1830	0.63	-1.3
1,850,862	+		GFF1830	0.63	-0.2
1,850,862	+		GFF1830	0.63	+0.5
1,850,862	+		GFF1830	0.63	+0.5
1,850,862	+		GFF1830	0.63	-0.2
1,850,864	-		GFF1830	0.64	-0.3
1,850,864	-		GFF1830	0.64	+0.7
1,850,870	-		GFF1830	0.64	-0.7
1,850,870	-		GFF1830	0.64	+0.5
1,850,956	-		GFF1830	0.74	-0.1
1,850,966	+		GFF1830	0.75	-0.6
1,850,998	+		GFF1830	0.79	-2.2
1,851,001	+		GFF1830	0.79	+0.0
1,851,001	+		GFF1830	0.79	+0.0
1,851,004	-		GFF1830	0.79	-1.0
1,851,006	+		GFF1830	0.80	+0.5
1,851,009	-		GFF1830	0.80	+0.5
1,851,030	+		GFF1830	0.82	+0.1
1,851,030	+		GFF1830	0.82	-0.3
1,851,030	+		GFF1830	0.82	-2.2
1,851,038	+		GFF1830	0.83	-0.5
1,851,038	-		GFF1830	0.83	-0.4
1,851,038	-		GFF1830	0.83	-2.4
1,851,051	+		GFF1830	0.85	+0.7
1,851,056	+		GFF1830	0.85	-0.6
1,851,059	-		GFF1830	0.86	-2.6
1,851,061	+		GFF1830	0.86	-1.1
1,851,061	+		GFF1830	0.86	+0.2
1,851,061	+		GFF1830	0.86	-1.1
1,851,069	-		GFF1830	0.87	-1.0
1,851,075	-		GFF1830	0.87	-1.1
1,851,075	-		GFF1830	0.87	+0.7
1,851,114	-				-0.2
1,851,114	-				+1.4
1,851,124	+				+1.3
1,851,131	+				-1.1
1,851,134	-				-1.1
1,851,170	-				-0.4
1,851,175	-				-0.6
1,851,206	-				+0.3
1,851,221	-				-1.3
1,851,231	+		GFF1831	0.10	+0.7
1,851,263	+		GFF1831	0.17	-0.4
1,851,312	+		GFF1831	0.29	+1.1
1,851,323	-		GFF1831	0.31	+1.2
1,851,342	-		GFF1831	0.36	-1.2
1,851,354	+		GFF1831	0.39	-1.2
1,851,361	+		GFF1831	0.40	-0.1
1,851,369	-		GFF1831	0.42	-0.3
1,851,369	-		GFF1831	0.42	-0.7
1,851,369	-		GFF1831	0.42	+0.8
1,851,384	+		GFF1831	0.46	+1.1
1,851,394	+		GFF1831	0.48	+0.0
1,851,394	+		GFF1831	0.48	-1.1
1,851,399	+		GFF1831	0.49	-0.2
1,851,402	-		GFF1831	0.50	-2.0
1,851,402	-		GFF1831	0.50	-0.5
1,851,405	+		GFF1831	0.51	-0.0
1,851,405	+		GFF1831	0.51	-0.5
1,851,407	-		GFF1831	0.51	-0.4
1,851,407	-		GFF1831	0.51	+0.2
1,851,413	-		GFF1831	0.52	-1.7
1,851,413	-		GFF1831	0.52	-1.3
1,851,428	+		GFF1831	0.56	+0.5
1,851,430	-		GFF1831	0.56	-1.5
1,851,433	+		GFF1831	0.57	-2.5
1,851,436	-		GFF1831	0.58	-0.6
1,851,436	-		GFF1831	0.58	-1.1
1,851,438	+		GFF1831	0.58	+0.0
1,851,445	+		GFF1831	0.60	+0.4
1,851,456	+		GFF1831	0.62	-0.1
1,851,456	+		GFF1831	0.62	-2.5
1,851,456	+		GFF1831	0.62	+0.7
1,851,456	+		GFF1831	0.62	-0.9
1,851,464	-		GFF1831	0.64	-0.6
1,851,464	-		GFF1831	0.64	-0.5
1,851,464	-		GFF1831	0.64	+0.2
1,851,464	-		GFF1831	0.64	+0.2
1,851,498	-		GFF1831	0.72	-0.1
1,851,512	-		GFF1831	0.76	+0.9
1,851,517	-		GFF1831	0.77	-1.0
1,851,520	+		GFF1831	0.77	-0.9
1,851,523	-		GFF1831	0.78	-0.1
1,851,528	-		GFF1831	0.79	-1.1
1,851,538	-		GFF1831	0.82	-1.1
1,851,548	+		GFF1831	0.84	+0.4
1,851,575	-				-1.1
1,851,589	-				+0.4
1,851,589	-				+0.3
1,851,599	+				-0.7
1,851,607	-				-0.2
1,851,628	+				+0.3
1,851,628	+				-1.1
1,851,628	+				+0.6
1,851,628	+				-1.1
1,851,628	+				-0.8
1,851,628	+				-0.2
1,851,628	+				-1.2
1,851,628	+				-0.4
1,851,636	+				-1.1
1,851,636	-				-0.3
1,851,636	-				+1.1
1,851,636	-				-0.3
1,851,636	-				-0.8
1,851,636	-				-0.3
1,851,636	-				+1.1
1,851,636	-				+0.8
1,851,636	-				+1.5
1,851,641	+				-1.1
1,851,644	-				-0.4
1,851,646	+				+0.4
1,851,647	+				+0.3
1,851,671	+				-0.7
1,851,690	+				-1.3
1,851,693	-				-0.3
1,851,722	+				+0.7
1,851,722	+				-0.3
1,851,732	+				+1.2
1,851,732	+				-0.7
1,851,735	-				-0.1
1,851,740	-				-0.1
1,851,760	-		GFF1832	0.11	-1.1
1,851,761	+		GFF1832	0.11	-1.4
1,851,776	+		GFF1832	0.12	-0.7
1,851,784	-		GFF1832	0.13	+0.2
1,851,784	-		GFF1832	0.13	-1.8
1,851,812	+		GFF1832	0.15	-1.1
1,851,820	+		GFF1832	0.15	-0.4
1,851,820	-		GFF1832	0.15	-1.1
1,851,828	-		GFF1832	0.16	-1.0
1,851,828	-		GFF1832	0.16	-0.7
1,851,860	+		GFF1832	0.18	+0.5
1,851,860	+		GFF1832	0.18	-0.5
1,851,869	-		GFF1832	0.19	-0.1
1,851,871	+		GFF1832	0.19	+0.3
1,851,871	+		GFF1832	0.19	-2.3
1,851,871	+		GFF1832	0.19	+0.4
1,851,879	-		GFF1832	0.20	+0.5
1,851,879	-		GFF1832	0.20	-0.3
1,851,879	-		GFF1832	0.20	+1.0
1,851,879	-		GFF1832	0.20	-0.5
1,851,879	-		GFF1832	0.20	-0.6
1,851,879	-		GFF1832	0.20	+0.8
1,851,903	-		GFF1832	0.21	-0.5
1,851,903	-		GFF1832	0.21	-0.0
1,851,903	-		GFF1832	0.21	-2.9
1,851,914	+		GFF1832	0.22	-0.6
1,851,914	+		GFF1832	0.22	-0.1
1,851,919	+		GFF1832	0.23	-1.2
1,851,919	+		GFF1832	0.23	-0.0
1,851,919	+		GFF1832	0.23	+0.5
1,851,927	-		GFF1832	0.23	-0.9
1,851,927	-		GFF1832	0.23	+1.7
1,851,927	-		GFF1832	0.23	-0.1
1,851,944	+		GFF1832	0.24	-1.0
1,851,958	+		GFF1832	0.25	-0.2
1,851,959	-		GFF1832	0.25	-0.4
1,851,964	+		GFF1832	0.26	-0.8
1,851,972	-		GFF1832	0.26	-1.0
1,851,972	-		GFF1832	0.26	+1.0
1,851,997	+		GFF1832	0.28	-1.9
1,852,005	-		GFF1832	0.29	+0.2
1,852,013	-		GFF1832	0.29	-1.3
1,852,017	-		GFF1832	0.30	+1.4
1,852,020	+		GFF1832	0.30	+0.4
1,852,028	+		GFF1832	0.30	-0.4
1,852,028	+		GFF1832	0.30	-0.9
1,852,031	-		GFF1832	0.31	+1.8
1,852,033	+		GFF1832	0.31	-1.3
1,852,033	+		GFF1832	0.31	+1.1
1,852,033	+		GFF1832	0.31	+0.3
1,852,033	+		GFF1832	0.31	+0.2
1,852,033	+		GFF1832	0.31	-0.3
1,852,033	+		GFF1832	0.31	-2.0
1,852,033	+		GFF1832	0.31	-0.4
1,852,033	+		GFF1832	0.31	-0.5
1,852,033	+		GFF1832	0.31	-0.0
1,852,033	+		GFF1832	0.31	+0.3
1,852,033	+		GFF1832	0.31	+0.7
1,852,041	-		GFF1832	0.31	-2.1
1,852,041	-		GFF1832	0.31	-0.0
1,852,041	-		GFF1832	0.31	-1.1
1,852,041	-		GFF1832	0.31	-0.5
1,852,041	-		GFF1832	0.31	-0.1
1,852,041	-		GFF1832	0.31	+0.6
1,852,041	-		GFF1832	0.31	+0.9
1,852,041	-		GFF1832	0.31	+0.1
1,852,041	-		GFF1832	0.31	-1.2
1,852,041	-		GFF1832	0.31	-0.5
1,852,041	-		GFF1832	0.31	+1.0
1,852,043	+		GFF1832	0.32	+0.6
1,852,043	+		GFF1832	0.32	+0.2
1,852,044	+		GFF1832	0.32	+0.1
1,852,046	-		GFF1832	0.32	+1.3
1,852,051	-		GFF1832	0.32	-0.1
1,852,051	-		GFF1832	0.32	+1.2
1,852,052	-		GFF1832	0.32	-0.4
1,852,052	-		GFF1832	0.32	-1.8
1,852,052	-		GFF1832	0.32	-0.9
1,852,052	-		GFF1832	0.32	+1.2
1,852,052	-		GFF1832	0.32	-0.0
1,852,074	-		GFF1832	0.34	-1.9
1,852,075	+		GFF1832	0.34	-0.8
1,852,083	-		GFF1832	0.34	-2.0
1,852,083	-		GFF1832	0.34	+1.1
1,852,083	-		GFF1832	0.34	-0.6
1,852,117	+		GFF1832	0.37	-0.1
1,852,117	+		GFF1832	0.37	-1.3
1,852,131	-		GFF1832	0.38	-1.2
1,852,135	-		GFF1832	0.38	-0.7
1,852,143	+		GFF1832	0.39	-1.8
1,852,143	+		GFF1832	0.39	+0.2
1,852,145	+		GFF1832	0.39	-0.9
1,852,145	+		GFF1832	0.39	-0.7
1,852,153	-		GFF1832	0.40	+0.3
1,852,173	+		GFF1832	0.41	-1.5
1,852,183	+		GFF1832	0.42	+0.4
1,852,183	+		GFF1832	0.42	+0.1
1,852,194	+		GFF1832	0.42	-1.8
1,852,194	+		GFF1832	0.42	-0.2
1,852,200	+		GFF1832	0.43	+0.7
1,852,202	-		GFF1832	0.43	-1.1
1,852,213	+		GFF1832	0.44	+0.1
1,852,215	-		GFF1832	0.44	+0.1
1,852,215	-		GFF1832	0.44	-1.6
1,852,215	-		GFF1832	0.44	-0.9
1,852,228	+		GFF1832	0.45	+0.1
1,852,228	+		GFF1832	0.45	+0.1
1,852,228	+		GFF1832	0.45	+1.4
1,852,228	+		GFF1832	0.45	-0.4
1,852,228	+		GFF1832	0.45	-1.2
1,852,228	+		GFF1832	0.45	+0.3
1,852,231	-		GFF1832	0.45	-2.5
1,852,236	-		GFF1832	0.46	+1.0
1,852,236	-		GFF1832	0.46	+0.1
1,852,236	-		GFF1832	0.46	-0.0
1,852,236	-		GFF1832	0.46	-0.6
1,852,238	+		GFF1832	0.46	-0.0
1,852,246	-		GFF1832	0.46	+2.1
1,852,250	-		GFF1832	0.47	-0.6
1,852,276	+		GFF1832	0.48	+0.4
1,852,283	+		GFF1832	0.49	-1.6
1,852,284	-		GFF1832	0.49	-0.5
1,852,286	+		GFF1832	0.49	+0.7
1,852,291	+		GFF1832	0.50	+0.9
1,852,291	-		GFF1832	0.50	-0.4
1,852,294	+		GFF1832	0.50	-0.3
1,852,294	-		GFF1832	0.50	+0.3
1,852,294	-		GFF1832	0.50	-2.2
1,852,305	-		GFF1832	0.51	-0.2
1,852,329	-		GFF1832	0.52	-1.6
1,852,344	+		GFF1832	0.53	+1.2
1,852,370	-		GFF1832	0.55	-0.9
1,852,372	+		GFF1832	0.55	-0.1
1,852,372	+		GFF1832	0.55	-1.7
1,852,372	+		GFF1832	0.55	-2.2
1,852,380	-		GFF1832	0.56	-0.0
1,852,380	-		GFF1832	0.56	-0.5
1,852,380	-		GFF1832	0.56	-1.7
1,852,380	-		GFF1832	0.56	+0.9
1,852,380	-		GFF1832	0.56	+0.8
1,852,390	+		GFF1832	0.57	-0.7
1,852,390	+		GFF1832	0.57	-0.9
1,852,398	-		GFF1832	0.57	-0.1
1,852,398	-		GFF1832	0.57	-1.3
1,852,401	+		GFF1832	0.58	+0.4
1,852,468	-		GFF1832	0.62	+0.5
1,852,483	-		GFF1832	0.63	-1.0
1,852,483	-		GFF1832	0.63	-0.4
1,852,498	+		GFF1832	0.65	+1.0
1,852,506	-		GFF1832	0.65	+0.3
1,852,510	+		GFF1832	0.65	+0.9
1,852,510	+		GFF1832	0.65	-0.6
1,852,510	+		GFF1832	0.65	-0.5
1,852,518	-		GFF1832	0.66	+0.1
1,852,520	+		GFF1832	0.66	-0.8
1,852,575	+		GFF1832	0.70	+0.1
1,852,583	-		GFF1832	0.71	-0.9
1,852,606	-		GFF1832	0.72	-1.8
1,852,672	-		GFF1832	0.77	-0.7
1,852,672	-		GFF1832	0.77	-2.0
1,852,676	-		GFF1832	0.77	+0.1
1,852,678	+		GFF1832	0.78	+0.8
1,852,678	+		GFF1832	0.78	-1.4
1,852,686	+		GFF1832	0.78	-1.1
1,852,686	+		GFF1832	0.78	-0.7
1,852,686	+		GFF1832	0.78	-1.5
1,852,709	-		GFF1832	0.80	-0.3
1,852,748	-		GFF1832	0.83	-1.3
1,852,768	-		GFF1832	0.84	+0.6
1,852,838	+		GFF1832	0.89	-0.3
1,852,856	-				+1.5
1,852,881	-				-0.4
1,852,895	+				+0.2
1,852,898	-				-1.9
1,852,908	-				+0.3
1,852,936	-				-1.9
1,852,937	+				-1.5
1,852,938	+				+0.2
1,852,938	+				-1.3
1,852,938	+				-0.2
1,852,938	+				+0.2
1,852,938	+				-1.0
1,852,938	+				-1.1
1,852,938	+				-0.9
1,852,938	+				+0.3
1,852,938	+				+0.7
1,852,941	-				+0.0
1,852,941	-				-0.1
1,852,941	-				+1.7
1,852,943	+				-1.3
1,852,945	-				+1.1
1,852,946	-				-0.1
1,852,946	-				+0.5
1,852,946	-				-0.1
1,852,946	-				+0.1
1,852,946	-				-0.2
1,852,946	-				+0.8
1,852,946	-				-0.7
1,852,946	-				-1.1
1,852,946	-				+1.1
1,852,946	-				-1.7
1,852,981	+				-1.1
1,852,996	-				-0.3
1,853,033	-				+0.5
1,853,041	-				-0.4
1,853,041	-				-0.6
1,853,041	-				+0.3
1,853,067	+				+0.1
1,853,067	+				-0.9
1,853,072	+				-1.1
1,853,075	-				-0.2
1,853,076	-				-0.5
1,853,080	-		GFF1833	0.11	-0.0
1,853,094	+		GFF1833	0.13	-0.3
1,853,104	+		GFF1833	0.14	+0.1
1,853,104	+		GFF1833	0.14	-1.0
1,853,107	-		GFF1833	0.14	-0.8
1,853,110	+		GFF1833	0.15	-1.2
1,853,111	+		GFF1833	0.15	+0.1
1,853,112	-		GFF1833	0.15	+0.1
1,853,118	+		GFF1833	0.16	-0.1
1,853,118	-		GFF1833	0.16	-0.3
1,853,152	-		GFF1833	0.21	-0.8
1,853,168	+		GFF1833	0.23	-0.1
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1,853,189	-		GFF1833	0.26	-0.8
1,853,199	-		GFF1833	0.27	+1.5
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1,853,221	-		GFF1833	0.31	+0.9
1,853,247	+		GFF1833	0.34	+1.1
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1,853,255	-		GFF1833	0.35	-1.0
1,853,255	-		GFF1833	0.35	+0.4
1,853,255	-		GFF1833	0.35	-0.1
1,853,265	-		GFF1833	0.37	-0.6
1,853,280	+		GFF1833	0.39	+0.2
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1,853,299	+		GFF1833	0.42	+0.1
1,853,299	+		GFF1833	0.42	-0.1
1,853,299	+		GFF1833	0.42	-0.6
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1,853,317	-		GFF1833	0.44	+1.1
1,853,322	-		GFF1833	0.45	-0.5
1,853,322	-		GFF1833	0.45	+0.9
1,853,322	-		GFF1833	0.45	+0.5
1,853,351	-		GFF1833	0.49	-0.5
1,853,351	-		GFF1833	0.49	+0.2
1,853,370	+		GFF1833	0.52	-0.4
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1,853,378	-		GFF1833	0.53	-0.1
1,853,396	-		GFF1833	0.56	-2.7
1,853,440	+		GFF1833	0.62	-0.0
1,853,447	+		GFF1833	0.63	+0.8
1,853,455	-		GFF1833	0.64	-0.7
1,853,455	-		GFF1833	0.64	-1.5
1,853,456	+		GFF1833	0.64	+1.3
1,853,456	-		GFF1833	0.64	-0.0
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1,853,466	-		GFF1833	0.66	-0.9
1,853,466	-		GFF1833	0.66	+1.3
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1,853,471	-		GFF1833	0.66	-0.4
1,853,471	-		GFF1833	0.66	-0.3
1,853,473	+		GFF1833	0.67	-1.1
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1,853,477	-		GFF1833	0.67	-0.2
1,853,481	-		GFF1833	0.68	-1.9
1,853,483	-		GFF1833	0.68	-0.5
1,853,483	-		GFF1833	0.68	+0.2
1,853,483	-		GFF1833	0.68	-1.4
1,853,498	-		GFF1833	0.70	-1.0
1,853,550	+		GFF1833	0.77	+0.3
1,853,566	-		GFF1833	0.80	-1.9
1,853,599	+		GFF1833	0.84	-2.0
1,853,604	+		GFF1833	0.85	-1.2
1,853,608	-		GFF1833	0.86	-1.9
1,853,617	-		GFF1833	0.87	+0.3
1,853,624	+		GFF1833	0.88	+0.5
1,853,642	+				+0.4
1,853,650	+				+0.2
1,853,658	-				+0.2
1,853,658	-				-0.5
1,853,658	-				-1.3
1,853,658	-				-0.6
1,853,658	-				-0.3
1,853,658	-				-0.3
1,853,663	-				+0.2
1,853,665	-				+1.1
1,853,670	-				-0.3
1,853,687	+				+0.1
1,853,700	-				-0.9
1,853,700	-				+1.0
1,853,700	-				-1.4
1,853,709	+				-1.2
1,853,709	+				+0.5
1,853,709	+				+0.1
1,853,709	+				+0.7
1,853,709	+				-0.4
1,853,712	-				-1.1
1,853,712	-				-1.9
1,853,714	+				-4.6
1,853,717	-				-0.6
1,853,717	-				-0.3
1,853,717	-				+1.2
1,853,717	-				+0.5
1,853,717	-				+0.2
1,853,722	-				+0.1
1,853,722	-				-1.0
1,853,722	-				-1.6
1,853,735	-				+1.2
1,853,745	+				+0.1
1,853,751	+				+1.2
1,853,751	+				+0.3
1,853,759	-				-0.4
1,853,767	+				+0.2
1,853,768	-				-1.5
1,853,768	-				+0.2
1,853,777	+		GFF1834	0.11	-0.4
1,853,777	+		GFF1834	0.11	-0.1
1,853,777	+		GFF1834	0.11	-0.6
1,853,807	+		GFF1834	0.17	+0.9
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1,853,807	+		GFF1834	0.17	-0.6
1,853,807	+		GFF1834	0.17	-2.3
1,853,807	+		GFF1834	0.17	-0.7
1,853,807	+		GFF1834	0.17	+1.0
1,853,807	+		GFF1834	0.17	+1.1
1,853,815	-		GFF1834	0.18	-1.8
1,853,815	-		GFF1834	0.18	+0.7
1,853,815	-		GFF1834	0.18	-0.7
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1,853,839	+		GFF1834	0.22	+1.2
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1,853,856	-		GFF1834	0.25	-2.0
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1,853,860	-		GFF1834	0.26	-0.3
1,853,880	+		GFF1834	0.29	+0.1
1,853,880	+		GFF1834	0.29	-1.7
1,853,882	+		GFF1834	0.30	-2.1
1,853,884	-		GFF1834	0.30	-0.6
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1,853,888	-		GFF1834	0.31	-0.2
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1,853,948	+		GFF1834	0.41	-1.3
1,853,948	+		GFF1834	0.41	-0.5
1,853,948	+		GFF1834	0.41	+0.6
1,853,948	+		GFF1834	0.41	-0.5