Strain Fitness in Sphingobium sp. HT1-2 around GFF1756

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
1,783,656	-		GFF1755	0.16	-0.4
1,783,682	-		GFF1755	0.19	-0.1
1,783,689	+		GFF1755	0.20	-2.3
1,783,702	+		GFF1755	0.21	+0.7
1,783,724	-		GFF1755	0.23	-0.9
1,783,728	-		GFF1755	0.23	-0.9
1,783,729	+		GFF1755	0.23	+1.1
1,783,730	-		GFF1755	0.23	+0.4
1,783,731	-		GFF1755	0.24	+1.2
1,783,755	+		GFF1755	0.26	+0.4
1,783,763	-		GFF1755	0.27	+0.0
1,783,802	+		GFF1755	0.30	+0.5
1,783,802	+		GFF1755	0.30	-1.4
1,783,810	-		GFF1755	0.31	+1.2
1,783,870	-		GFF1755	0.37	+0.7
1,783,889	+		GFF1755	0.39	-0.3
1,783,897	-		GFF1755	0.39	-0.9
1,783,902	+		GFF1755	0.40	-0.0
1,783,902	+		GFF1755	0.40	+1.3
1,783,902	+		GFF1755	0.40	-2.3
1,783,902	+		GFF1755	0.40	-1.6
1,783,902	+		GFF1755	0.40	-1.6
1,783,902	+		GFF1755	0.40	-0.2
1,783,905	-		GFF1755	0.40	-1.9
1,783,910	-		GFF1755	0.41	-0.4
1,783,910	-		GFF1755	0.41	+0.1
1,783,910	-		GFF1755	0.41	+0.2
1,783,910	-		GFF1755	0.41	-1.1
1,783,910	-		GFF1755	0.41	-3.2
1,783,956	-		GFF1755	0.45	-2.1
1,783,963	+		GFF1755	0.46	-0.9
1,783,971	+		GFF1755	0.46	-0.9
1,783,971	-		GFF1755	0.46	-0.2
1,783,979	-		GFF1755	0.47	+0.2
1,783,981	-		GFF1755	0.47	+1.1
1,784,023	+		GFF1755	0.51	-1.1
1,784,035	+		GFF1755	0.52	-0.9
1,784,050	+		GFF1755	0.54	-0.9
1,784,050	+		GFF1755	0.54	+0.6
1,784,050	+		GFF1755	0.54	-0.6
1,784,050	+		GFF1755	0.54	-1.9
1,784,050	+		GFF1755	0.54	-1.0
1,784,050	+		GFF1755	0.54	-1.4
1,784,051	-		GFF1755	0.54	+1.0
1,784,055	+		GFF1755	0.54	-0.2
1,784,058	-		GFF1755	0.55	+1.1
1,784,058	-		GFF1755	0.55	-1.1
1,784,058	-		GFF1755	0.55	-0.9
1,784,058	-		GFF1755	0.55	+0.1
1,784,062	-		GFF1755	0.55	-1.1
1,784,070	-		GFF1755	0.56	+1.0
1,784,136	-		GFF1755	0.62	-0.0
1,784,171	+		GFF1755	0.65	+1.1
1,784,175	-		GFF1755	0.66	+0.1
1,784,184	+		GFF1755	0.66	+1.0
1,784,207	+		GFF1755	0.69	-1.6
1,784,227	+		GFF1755	0.71	-1.3
1,784,227	+		GFF1755	0.71	-0.9
1,784,227	+		GFF1755	0.71	-1.0
1,784,227	+		GFF1755	0.71	+0.4
1,784,227	+		GFF1755	0.71	+1.4
1,784,227	+		GFF1755	0.71	-1.4
1,784,227	+		GFF1755	0.71	-0.6
1,784,227	+		GFF1755	0.71	+0.6
1,784,227	+		GFF1755	0.71	-0.5
1,784,235	-		GFF1755	0.71	+1.1
1,784,235	-		GFF1755	0.71	+0.6
1,784,235	-		GFF1755	0.71	-0.1
1,784,235	-		GFF1755	0.71	-1.2
1,784,235	-		GFF1755	0.71	-1.1
1,784,235	-		GFF1755	0.71	+0.5
1,784,235	-		GFF1755	0.71	-0.3
1,784,235	-		GFF1755	0.71	-0.3
1,784,235	-		GFF1755	0.71	-2.6
1,784,235	-		GFF1755	0.71	-1.4
1,784,247	+		GFF1755	0.72	-1.7
1,784,247	+		GFF1755	0.72	-0.5
1,784,247	+		GFF1755	0.72	-1.6
1,784,250	-		GFF1755	0.73	+0.2
1,784,250	-		GFF1755	0.73	-0.7
1,784,255	-		GFF1755	0.73	-0.8
1,784,278	-		GFF1755	0.75	-2.4
1,784,295	-		GFF1755	0.77	+1.2
1,784,319	+		GFF1755	0.79	-1.3
1,784,319	+		GFF1755	0.79	+0.5
1,784,319	+		GFF1755	0.79	+0.3
1,784,319	+		GFF1755	0.79	-0.2
1,784,319	+		GFF1755	0.79	+0.2
1,784,327	-		GFF1755	0.80	+0.2
1,784,327	-		GFF1755	0.80	-0.1
1,784,327	-		GFF1755	0.80	-0.6
1,784,360	-		GFF1755	0.83	+0.5
1,784,365	-		GFF1755	0.84	-0.4
1,784,365	-		GFF1755	0.84	+0.3
1,784,365	-		GFF1755	0.84	-0.0
1,784,365	-		GFF1755	0.84	-0.1
1,784,375	+		GFF1755	0.85	-1.3
1,784,393	-		GFF1755	0.86	-0.8
1,784,484	-				-0.5
1,784,510	+				+0.3
1,784,510	+				-0.9
1,784,518	-				-0.0
1,784,518	-				-1.1
1,784,536	+				-1.9
1,784,544	-				-0.3
1,784,564	+				-0.1
1,784,576	-				-1.3
1,784,637	+				+1.1
1,784,637	+				+0.0
1,784,637	+				-0.6
1,784,637	+				-1.0
1,784,637	+				+0.3
1,784,637	+				+0.3
1,784,637	+				-0.1
1,784,637	+				-0.5
1,784,637	+				+0.6
1,784,637	-				+0.1
1,784,645	-				+0.8
1,784,645	-				+0.7
1,784,645	-				+1.0
1,784,645	-				-1.1
1,784,645	-				+0.1
1,784,650	-				-0.9
1,784,691	-				+0.4
1,784,702	-				+1.3
1,784,721	-				-2.0
1,784,733	+		GFF1756	0.10	+0.3
1,784,733	+		GFF1756	0.10	-0.8
1,784,738	+		GFF1756	0.11	+0.2
1,784,738	+		GFF1756	0.11	-1.6
1,784,745	+		GFF1756	0.11	+0.7
1,784,746	-		GFF1756	0.11	+1.5
1,784,753	-		GFF1756	0.12	-0.2
1,784,753	-		GFF1756	0.12	+0.5
1,784,764	-		GFF1756	0.13	-0.2
1,784,769	-		GFF1756	0.13	+0.9
1,784,774	-		GFF1756	0.14	-0.1
1,784,801	+		GFF1756	0.16	+0.3
1,784,801	+		GFF1756	0.16	+1.3
1,784,801	+		GFF1756	0.16	-0.5
1,784,809	-		GFF1756	0.16	+0.6
1,784,809	-		GFF1756	0.16	+1.0
1,784,809	-		GFF1756	0.16	+1.2
1,784,818	+		GFF1756	0.17	-1.3
1,784,824	-		GFF1756	0.18	+0.4
1,784,848	+		GFF1756	0.20	+0.8
1,784,848	+		GFF1756	0.20	-0.6
1,784,848	+		GFF1756	0.20	-0.7
1,784,848	+		GFF1756	0.20	-0.3
1,784,848	+		GFF1756	0.20	-0.9
1,784,848	+		GFF1756	0.20	-0.5
1,784,856	-		GFF1756	0.20	+0.3
1,784,856	-		GFF1756	0.20	-0.8
1,784,856	-		GFF1756	0.20	+0.5
1,784,856	-		GFF1756	0.20	+0.7
1,784,856	-		GFF1756	0.20	-0.7
1,784,856	-		GFF1756	0.20	+0.2
1,784,864	-		GFF1756	0.21	+0.1
1,784,875	-		GFF1756	0.22	-0.0
1,784,898	+		GFF1756	0.24	-0.4
1,784,902	-		GFF1756	0.24	-0.8
1,784,932	+		GFF1756	0.26	-1.4
1,784,949	+		GFF1756	0.28	-1.4
1,784,957	-		GFF1756	0.29	+0.3
1,784,963	+		GFF1756	0.29	-0.3
1,784,963	+		GFF1756	0.29	-0.3
1,784,963	+		GFF1756	0.29	+1.0
1,784,963	+		GFF1756	0.29	+2.4
1,784,963	+		GFF1756	0.29	-0.7
1,784,963	+		GFF1756	0.29	+1.0
1,784,963	+		GFF1756	0.29	-1.4
1,784,971	-		GFF1756	0.30	-1.4
1,784,971	-		GFF1756	0.30	+0.9
1,784,971	-		GFF1756	0.30	-0.3
1,784,971	-		GFF1756	0.30	+0.3
1,784,971	-		GFF1756	0.30	-1.8
1,784,971	-		GFF1756	0.30	+0.7
1,784,971	-		GFF1756	0.30	+0.9
1,785,015	-		GFF1756	0.33	+1.0
1,785,075	-		GFF1756	0.38	-1.6
1,785,083	+		GFF1756	0.39	+0.0
1,785,090	+		GFF1756	0.39	+0.0
1,785,110	-		GFF1756	0.41	+0.1
1,785,123	-		GFF1756	0.42	-0.2
1,785,123	-		GFF1756	0.42	+1.6
1,785,128	-		GFF1756	0.42	-1.6
1,785,133	-		GFF1756	0.43	-0.4
1,785,184	-		GFF1756	0.47	+0.5
1,785,228	-		GFF1756	0.51	-0.1
1,785,251	+		GFF1756	0.53	+0.6
1,785,265	+		GFF1756	0.54	-0.0
1,785,266	-		GFF1756	0.54	-2.5
1,785,270	+		GFF1756	0.54	-0.6
1,785,298	+		GFF1756	0.56	+1.2
1,785,298	+		GFF1756	0.56	-0.1
1,785,307	-		GFF1756	0.57	+0.3
1,785,311	-		GFF1756	0.57	+0.2
1,785,313	+		GFF1756	0.58	+0.4
1,785,321	-		GFF1756	0.58	+0.4
1,785,359	-		GFF1756	0.61	+0.1
1,785,377	+		GFF1756	0.63	-0.7
1,785,392	+		GFF1756	0.64	+0.2
1,785,392	+		GFF1756	0.64	-1.9
1,785,438	+		GFF1756	0.68	+1.4
1,785,438	+		GFF1756	0.68	-0.7
1,785,438	-		GFF1756	0.68	+1.2
1,785,446	+		GFF1756	0.68	-1.3
1,785,448	+		GFF1756	0.69	-0.8
1,785,462	+		GFF1756	0.70	-0.7
1,785,462	+		GFF1756	0.70	-0.4
1,785,462	+		GFF1756	0.70	-0.8
1,785,463	-		GFF1756	0.70	+0.6
1,785,464	+		GFF1756	0.70	-2.5
1,785,470	-		GFF1756	0.70	-0.3
1,785,472	+		GFF1756	0.71	-0.6
1,785,472	+		GFF1756	0.71	+1.1
1,785,475	-		GFF1756	0.71	-2.6
1,785,480	-		GFF1756	0.71	-1.4
1,785,480	-		GFF1756	0.71	-1.2
1,785,518	+		GFF1756	0.74	-0.7
1,785,518	+		GFF1756	0.74	+0.4
1,785,518	+		GFF1756	0.74	-1.1
1,785,518	+		GFF1756	0.74	+0.6
1,785,518	+		GFF1756	0.74	-2.2
1,785,519	+		GFF1756	0.74	+0.6
1,785,526	-		GFF1756	0.75	-1.0
1,785,526	-		GFF1756	0.75	+0.9
1,785,526	-		GFF1756	0.75	-0.5
1,785,526	-		GFF1756	0.75	-0.3
1,785,526	-		GFF1756	0.75	-1.6
1,785,526	-		GFF1756	0.75	-1.9
1,785,527	-		GFF1756	0.75	-0.7
1,785,531	-		GFF1756	0.75	-0.1
1,785,536	-		GFF1756	0.76	+0.2
1,785,603	+		GFF1756	0.81	-0.8
1,785,609	-		GFF1756	0.82	-0.4
1,785,609	-		GFF1756	0.82	+0.4
1,785,623	+		GFF1756	0.83	+1.0
1,785,634	+		GFF1756	0.84	-0.1
1,785,661	+		GFF1756	0.86	-2.4
1,785,669	-		GFF1756	0.87	+0.4
1,785,674	+		GFF1756	0.87	-0.9
1,785,674	+		GFF1756	0.87	-1.9
1,785,676	+		GFF1756	0.87	-2.4
1,785,682	-		GFF1756	0.88	-0.0
1,785,682	-		GFF1756	0.88	-2.0
1,785,706	+		GFF1756	0.90	-1.2
1,785,706	+		GFF1756	0.90	-0.5
1,785,716	+				-0.9
1,785,727	+				+0.7
1,785,734	+				-0.3
1,785,740	-				-0.6
1,785,740	-				+1.0
1,785,768	-				-1.5
1,785,779	+				-0.6
1,785,783	+				+0.9
1,785,804	+				+0.7
1,785,839	+				-0.7
1,785,909	+				-1.1
1,785,994	-				+0.2
1,786,007	+				+0.2
1,786,022	+				-0.3
1,786,030	-				+0.6
1,786,032	+				-1.0
1,786,033	+				-0.6
1,786,047	+				+0.1
1,786,058	-				-1.7
1,786,097	+		GFF1757	0.12	-0.8
1,786,110	+		GFF1757	0.14	-1.4
1,786,118	-		GFF1757	0.16	+0.3
1,786,153	+		GFF1757	0.21	-1.1
1,786,153	+		GFF1757	0.21	-0.2
1,786,161	-		GFF1757	0.22	-1.1
1,786,161	-		GFF1757	0.22	+0.2
1,786,172	-		GFF1757	0.24	+0.7
1,786,193	+		GFF1757	0.27	+0.2
1,786,193	+		GFF1757	0.27	+0.9
1,786,193	+		GFF1757	0.27	+1.7
1,786,201	-		GFF1757	0.28	-0.0
1,786,201	-		GFF1757	0.28	+0.4
1,786,201	-		GFF1757	0.28	-0.3
1,786,257	-		GFF1757	0.37	-1.6
1,786,268	-		GFF1757	0.39	+0.7
1,786,269	-		GFF1757	0.39	+0.2
1,786,277	-		GFF1757	0.40	-2.2
1,786,277	-		GFF1757	0.40	-0.4
1,786,304	+		GFF1757	0.44	-0.7
1,786,312	-		GFF1757	0.45	+0.7
1,786,342	-		GFF1757	0.50	+1.2
1,786,347	-		GFF1757	0.51	-0.2
1,786,364	+		GFF1757	0.53	-0.3
1,786,364	+		GFF1757	0.53	-0.6
1,786,364	+		GFF1757	0.53	+0.6
1,786,364	+		GFF1757	0.53	-0.7
1,786,365	+		GFF1757	0.53	-1.2
1,786,365	+		GFF1757	0.53	+0.2
1,786,366	-		GFF1757	0.53	+0.5
1,786,372	-		GFF1757	0.54	+0.9
1,786,372	-		GFF1757	0.54	-1.8
1,786,372	-		GFF1757	0.54	-0.4
1,786,372	-		GFF1757	0.54	+0.3
1,786,372	-		GFF1757	0.54	+0.2
1,786,372	-		GFF1757	0.54	-0.2
1,786,378	-		GFF1757	0.55	+0.1
1,786,404	+		GFF1757	0.59	-0.4
1,786,410	+		GFF1757	0.60	-0.4
1,786,410	+		GFF1757	0.60	-0.3
1,786,433	-		GFF1757	0.64	-1.2
1,786,434	+		GFF1757	0.64	-1.5
1,786,434	+		GFF1757	0.64	+0.2
1,786,442	-		GFF1757	0.65	-2.1
1,786,449	+		GFF1757	0.66	+0.3
1,786,466	+		GFF1757	0.69	+1.4
1,786,466	+		GFF1757	0.69	-1.4
1,786,476	-		GFF1757	0.70	-0.9
1,786,493	-		GFF1757	0.73	+1.2
1,786,536	+		GFF1757	0.79	-0.5
1,786,536	+		GFF1757	0.79	-1.9
1,786,538	+		GFF1757	0.80	-1.7
1,786,540	-		GFF1757	0.80	-0.3
1,786,541	+		GFF1757	0.80	+0.4
1,786,544	-		GFF1757	0.81	-0.0
1,786,544	-		GFF1757	0.81	-0.3
1,786,544	-		GFF1757	0.81	+0.6
1,786,549	-		GFF1757	0.81	-0.1
1,786,552	+		GFF1757	0.82	+0.6
1,786,552	+		GFF1757	0.82	-0.1
1,786,552	+		GFF1757	0.82	+1.1
1,786,560	-		GFF1757	0.83	-1.8
1,786,562	+		GFF1757	0.83	+2.1
1,786,562	+		GFF1757	0.83	+0.1
1,786,570	-		GFF1757	0.84	-2.1
1,786,578	-		GFF1757	0.86	+0.6
1,786,607	-				+0.8
1,786,614	+				-0.7
1,786,622	-				+1.3
1,786,651	+				+0.3
1,786,683	+				-0.0
1,786,683	+				-1.4
1,786,683	+				-0.1
1,786,691	-				+0.8
1,786,691	-				-0.2
1,786,691	-				-1.8
1,786,693	+				-0.6
1,786,693	+				-1.3
1,786,693	+				-0.5
1,786,693	+				-1.1
1,786,693	+				+1.2
1,786,693	+				-0.1
1,786,693	+				-0.3
1,786,700	+				-1.6
1,786,700	+				-1.1
1,786,700	+				-0.1
1,786,700	+				+0.1
1,786,700	+				-0.6
1,786,700	+				-0.7
1,786,700	+				+0.1
1,786,700	+				-1.5
1,786,700	+				+0.8
1,786,701	-				+0.6
1,786,701	-				-1.6
1,786,701	-				-1.1
1,786,701	-				-0.7
1,786,708	-				-0.2
1,786,708	-				+0.5
1,786,708	-				-0.1
1,786,733	+				-0.3
1,786,733	+				+0.4
1,786,733	-				-0.3
1,786,741	-				+1.0
1,786,747	-				-0.6
1,786,749	+				-1.1
1,786,754	+				-0.4
1,786,754	+				-0.7
1,786,762	-				-0.4
1,786,775	+				-1.5
1,786,783	-				-1.4
1,786,789	+				-0.1
1,786,789	+				+0.9
1,786,789	+				-2.9
1,786,809	+				-0.2
1,786,817	-				-1.6
1,786,817	-				+1.5
1,786,817	-				+1.3
1,786,817	-				+0.1
1,786,823	+				-1.1
1,786,823	+				-0.1
1,786,831	-				-0.2