Strain Fitness in Sphingobium sp. HT1-2 around GFF1639

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
1,665,236	+				-0.0
1,665,241	+				-1.0
1,665,241	+				+0.1
1,665,241	+				-0.1
1,665,241	+				+0.3
1,665,241	+				-0.4
1,665,241	+				-0.3
1,665,241	+				-0.0
1,665,241	+				-0.3
1,665,241	+				-1.7
1,665,241	+				-0.8
1,665,241	+				-1.3
1,665,241	+				+1.3
1,665,241	+				-0.4
1,665,241	+				+1.2
1,665,241	+				+0.1
1,665,241	+				-0.5
1,665,241	+				-1.1
1,665,241	+				-1.8
1,665,241	+				+0.1
1,665,241	+				+0.5
1,665,241	+				-0.4
1,665,241	+				-0.7
1,665,241	+				+0.5
1,665,241	+				-2.0
1,665,241	+				-0.7
1,665,241	+				-0.8
1,665,241	+				-0.3
1,665,241	+				-1.9
1,665,241	+				+0.6
1,665,241	+				+0.2
1,665,241	+				+0.2
1,665,241	+				+0.2
1,665,241	+				-0.5
1,665,241	+				-0.2
1,665,241	+				-0.5
1,665,241	+				-1.7
1,665,241	+				-0.6
1,665,241	+				+0.3
1,665,241	+				+1.6
1,665,241	+				+0.2
1,665,241	+				-1.9
1,665,241	+				-1.4
1,665,241	+				-0.9
1,665,241	+				+0.6
1,665,249	-				+0.1
1,665,249	-				+0.2
1,665,249	-				-0.8
1,665,249	-				-0.9
1,665,249	-				-0.8
1,665,249	-				+0.4
1,665,249	-				-1.5
1,665,249	-				-0.9
1,665,249	-				-0.3
1,665,249	-				-2.0
1,665,249	-				+0.1
1,665,249	-				-0.0
1,665,249	-				+0.6
1,665,249	-				+0.6
1,665,249	-				-0.5
1,665,249	-				-0.7
1,665,249	-				-0.4
1,665,249	-				+0.5
1,665,249	-				+0.3
1,665,249	-				+1.3
1,665,249	-				-0.4
1,665,249	-				+0.3
1,665,249	-				+0.5
1,665,249	-				+0.1
1,665,249	-				+1.3
1,665,249	-				+1.2
1,665,249	-				-1.0
1,665,249	-				+1.0
1,665,249	-				+0.4
1,665,249	-				+1.0
1,665,249	-				-0.9
1,665,249	-				-0.1
1,665,267	-				-0.0
1,665,286	-				+0.1
1,665,286	-				-0.6
1,665,286	-				-0.8
1,665,296	-				-0.6
1,665,352	+		GFF1638	0.19	-0.3
1,665,353	+		GFF1638	0.19	-0.3
1,665,373	+		GFF1638	0.23	+0.3
1,665,373	+		GFF1638	0.23	+0.8
1,665,388	+		GFF1638	0.26	-1.3
1,665,388	+		GFF1638	0.26	-0.6
1,665,395	+		GFF1638	0.28	-2.3
1,665,395	+		GFF1638	0.28	-0.5
1,665,395	+		GFF1638	0.28	-1.5
1,665,395	+		GFF1638	0.28	+1.1
1,665,395	+		GFF1638	0.28	+0.4
1,665,395	+		GFF1638	0.28	-0.6
1,665,395	+		GFF1638	0.28	-2.1
1,665,395	+		GFF1638	0.28	-0.2
1,665,395	+		GFF1638	0.28	+0.1
1,665,399	+		GFF1638	0.29	-0.5
1,665,401	+		GFF1638	0.29	+0.1
1,665,403	-		GFF1638	0.29	-0.6
1,665,403	-		GFF1638	0.29	+0.3
1,665,403	-		GFF1638	0.29	-1.8
1,665,403	-		GFF1638	0.29	+1.0
1,665,403	-		GFF1638	0.29	-0.1
1,665,403	-		GFF1638	0.29	-0.0
1,665,403	-		GFF1638	0.29	-2.0
1,665,403	-		GFF1638	0.29	-1.6
1,665,403	-		GFF1638	0.29	-1.4
1,665,403	-		GFF1638	0.29	-1.5
1,665,403	-		GFF1638	0.29	-0.7
1,665,403	-		GFF1638	0.29	+1.0
1,665,403	-		GFF1638	0.29	+0.3
1,665,403	-		GFF1638	0.29	-0.9
1,665,403	-		GFF1638	0.29	+0.7
1,665,403	-		GFF1638	0.29	-1.1
1,665,407	-		GFF1638	0.30	-0.7
1,665,407	-		GFF1638	0.30	-1.3
1,665,408	-		GFF1638	0.30	-0.7
1,665,409	+		GFF1638	0.31	-0.4
1,665,410	+		GFF1638	0.31	+0.2
1,665,416	+		GFF1638	0.32	+0.4
1,665,416	+		GFF1638	0.32	+1.0
1,665,416	+		GFF1638	0.32	-1.9
1,665,417	-		GFF1638	0.32	-0.3
1,665,422	+		GFF1638	0.33	-1.9
1,665,422	-		GFF1638	0.33	-0.3
1,665,432	-		GFF1638	0.35	-2.0
1,665,442	+		GFF1638	0.37	-1.1
1,665,443	+		GFF1638	0.37	+0.8
1,665,443	+		GFF1638	0.37	-0.3
1,665,443	+		GFF1638	0.37	+0.7
1,665,443	+		GFF1638	0.37	+0.6
1,665,450	-		GFF1638	0.39	-0.3
1,665,451	-		GFF1638	0.39	-2.1
1,665,451	-		GFF1638	0.39	-0.8
1,665,451	-		GFF1638	0.39	+0.5
1,665,451	-		GFF1638	0.39	+0.7
1,665,451	-		GFF1638	0.39	-1.3
1,665,487	+		GFF1638	0.46	+0.8
1,665,487	+		GFF1638	0.46	-1.1
1,665,487	+		GFF1638	0.46	+0.5
1,665,495	-		GFF1638	0.48	-0.7
1,665,495	-		GFF1638	0.48	-1.1
1,665,495	-		GFF1638	0.48	-1.1
1,665,495	-		GFF1638	0.48	-0.5
1,665,495	-		GFF1638	0.48	-1.8
1,665,495	-		GFF1638	0.48	-1.1
1,665,510	-		GFF1638	0.51	+1.0
1,665,551	+		GFF1638	0.59	-0.6
1,665,552	-		GFF1638	0.59	-0.1
1,665,561	+		GFF1638	0.61	-1.4
1,665,595	-		GFF1638	0.68	-2.9
1,665,601	+		GFF1638	0.69	+0.3
1,665,601	+		GFF1638	0.69	-1.7
1,665,601	+		GFF1638	0.69	+0.1
1,665,601	+		GFF1638	0.69	-2.4
1,665,601	+		GFF1638	0.69	+0.1
1,665,603	+		GFF1638	0.69	-1.2
1,665,609	-		GFF1638	0.70	+0.2
1,665,609	-		GFF1638	0.70	+0.4
1,665,609	-		GFF1638	0.70	+0.4
1,665,609	-		GFF1638	0.70	-0.5
1,665,609	-		GFF1638	0.70	-1.1
1,665,611	+		GFF1638	0.71	+0.5
1,665,611	+		GFF1638	0.71	-0.4
1,665,611	+		GFF1638	0.71	-0.1
1,665,611	+		GFF1638	0.71	+1.2
1,665,611	+		GFF1638	0.71	-0.6
1,665,611	+		GFF1638	0.71	-0.5
1,665,611	+		GFF1638	0.71	-1.9
1,665,611	-		GFF1638	0.71	-1.5
1,665,619	-		GFF1638	0.72	+0.3
1,665,619	-		GFF1638	0.72	-0.1
1,665,619	-		GFF1638	0.72	-1.1
1,665,619	-		GFF1638	0.72	-0.3
1,665,619	-		GFF1638	0.72	-0.1
1,665,619	-		GFF1638	0.72	+0.6
1,665,619	-		GFF1638	0.72	+1.5
1,665,662	+		GFF1638	0.81	-1.0
1,665,670	-		GFF1638	0.83	-0.1
1,665,672	+		GFF1638	0.83	-0.4
1,665,680	-		GFF1638	0.85	-1.4
1,665,685	-		GFF1638	0.86	-0.3
1,665,714	+				+0.9
1,665,741	+				-0.1
1,665,761	+				+0.5
1,665,761	+				-0.4
1,665,767	-				-0.1
1,665,768	+				-1.3
1,665,769	-				-0.2
1,665,789	+				+1.1
1,665,789	+				+0.1
1,665,795	+				-0.8
1,665,797	-				-0.7
1,665,802	-				+0.3
1,665,843	-				-2.0
1,665,847	+				-0.3
1,665,863	-				-0.9
1,665,904	-				-1.5
1,665,945	+				-0.9
1,665,954	+				-1.9
1,665,987	+				+0.2
1,665,995	-				-0.6
1,665,995	-				-1.3
1,666,019	-				+0.3
1,666,041	+				-0.3
1,666,056	+				-0.3
1,666,065	-				+0.9
1,666,065	-				+1.0
1,666,074	-				-0.2
1,666,074	-				+0.9
1,666,090	-				+0.6
1,666,090	-				-1.3
1,666,090	-				-1.4
1,666,096	-				+0.3
1,666,110	+				-2.1
1,666,110	+				+0.9
1,666,118	-				-1.2
1,666,126	+				+0.3
1,666,126	+				+1.0
1,666,134	-				-1.3
1,666,154	+				-0.8
1,666,155	-				-0.9
1,666,155	-				+0.7
1,666,172	-				+1.0
1,666,180	-				+0.7
1,666,183	+				+0.2
1,666,183	+				+0.9
1,666,183	+				+0.8
1,666,183	+				+0.2
1,666,191	-				-0.2
1,666,191	-				+0.9
1,666,194	+				+0.3
1,666,194	+				+0.2
1,666,194	+				+0.9
1,666,298	-		GFF1639	0.35	+0.4
1,666,321	+		GFF1639	0.40	-0.6
1,666,321	+		GFF1639	0.40	-0.4
1,666,321	+		GFF1639	0.40	-2.0
1,666,321	+		GFF1639	0.40	-0.0
1,666,321	+		GFF1639	0.40	-1.2
1,666,321	+		GFF1639	0.40	-1.7
1,666,321	+		GFF1639	0.40	-1.6
1,666,321	+		GFF1639	0.40	-2.4
1,666,321	+		GFF1639	0.40	-0.6
1,666,329	-		GFF1639	0.42	-0.5
1,666,329	-		GFF1639	0.42	-1.3
1,666,329	-		GFF1639	0.42	+0.8
1,666,329	-		GFF1639	0.42	+0.1
1,666,329	-		GFF1639	0.42	+0.2
1,666,329	-		GFF1639	0.42	-0.0
1,666,379	+		GFF1639	0.55	-2.7
1,666,387	-		GFF1639	0.57	-1.4
1,666,387	-		GFF1639	0.57	-0.0
1,666,387	-		GFF1639	0.57	-0.7
1,666,405	+		GFF1639	0.62	-0.8
1,666,405	+		GFF1639	0.62	-0.6
1,666,405	+		GFF1639	0.62	+1.2
1,666,408	-		GFF1639	0.62	-0.0
1,666,409	+		GFF1639	0.63	+0.5
1,666,411	+		GFF1639	0.63	+0.7
1,666,413	-		GFF1639	0.64	+0.1
1,666,413	-		GFF1639	0.64	-0.3
1,666,420	+		GFF1639	0.65	-0.5
1,666,428	-		GFF1639	0.67	-0.9
1,666,428	-		GFF1639	0.67	+0.1
1,666,428	-		GFF1639	0.67	-0.5
1,666,438	-		GFF1639	0.70	+0.5
1,666,438	-		GFF1639	0.70	+1.2
1,666,456	-		GFF1639	0.74	-0.0
1,666,461	+		GFF1639	0.76	-0.6
1,666,492	+		GFF1639	0.84	+0.5
1,666,492	+		GFF1639	0.84	+1.7
1,666,492	+		GFF1639	0.84	-0.2
1,666,494	+		GFF1639	0.84	+1.2
1,666,495	-		GFF1639	0.84	+1.5
1,666,500	-		GFF1639	0.86	-0.0
1,666,500	-		GFF1639	0.86	-0.8
1,666,500	-		GFF1639	0.86	-0.5
1,666,500	-		GFF1639	0.86	-0.6
1,666,500	-		GFF1639	0.86	-1.0
1,666,509	-		GFF1639	0.88	-0.6
1,666,528	+				+0.2
1,666,528	+				+0.4
1,666,528	+				-0.2
1,666,536	-				-0.1
1,666,561	-				+0.2
1,666,561	-				-1.4
1,666,616	+				+0.7
1,666,616	+				-1.9
1,666,624	-				-1.6
1,666,625	+				-0.3
1,666,714	-				-0.6