Strain Fitness in Sphingobium sp. HT1-2 around GFF1412

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
1,440,289	-		GFF1411	0.18	-1.4
1,440,289	-		GFF1411	0.18	-1.1
1,440,289	-		GFF1411	0.18	+0.9
1,440,289	-		GFF1411	0.18	+0.2
1,440,289	-		GFF1411	0.18	-2.5
1,440,289	-		GFF1411	0.18	-0.3
1,440,289	-		GFF1411	0.18	-1.0
1,440,289	-		GFF1411	0.18	+0.8
1,440,289	-		GFF1411	0.18	+0.8
1,440,289	-		GFF1411	0.18	-1.6
1,440,289	-		GFF1411	0.18	-1.0
1,440,289	-		GFF1411	0.18	+1.0
1,440,289	-		GFF1411	0.18	-0.9
1,440,289	-		GFF1411	0.18	+0.4
1,440,289	-		GFF1411	0.18	+0.8
1,440,289	-		GFF1411	0.18	+0.0
1,440,289	-		GFF1411	0.18	-0.6
1,440,289	-		GFF1411	0.18	+0.1
1,440,289	-		GFF1411	0.18	-0.3
1,440,289	-		GFF1411	0.18	-1.5
1,440,289	-		GFF1411	0.18	-0.0
1,440,289	-		GFF1411	0.18	-1.3
1,440,289	-		GFF1411	0.18	+0.2
1,440,289	-		GFF1411	0.18	-2.2
1,440,289	-		GFF1411	0.18	-0.4
1,440,289	-		GFF1411	0.18	-0.8
1,440,289	-		GFF1411	0.18	-0.2
1,440,289	-		GFF1411	0.18	+0.8
1,440,289	-		GFF1411	0.18	-0.5
1,440,289	-		GFF1411	0.18	-0.5
1,440,289	-		GFF1411	0.18	-0.1
1,440,289	-		GFF1411	0.18	-1.0
1,440,294	-		GFF1411	0.19	+0.9
1,440,294	-		GFF1411	0.19	-0.5
1,440,294	-		GFF1411	0.19	-0.3
1,440,309	+		GFF1411	0.20	+0.0
1,440,349	+		GFF1411	0.23	-2.2
1,440,349	-		GFF1411	0.23	+0.7
1,440,368	+		GFF1411	0.25	-0.8
1,440,368	+		GFF1411	0.25	-0.8
1,440,368	+		GFF1411	0.25	+1.0
1,440,376	-		GFF1411	0.25	+0.3
1,440,376	-		GFF1411	0.25	+0.7
1,440,376	-		GFF1411	0.25	-0.2
1,440,376	-		GFF1411	0.25	+1.2
1,440,385	-		GFF1411	0.26	+1.0
1,440,385	-		GFF1411	0.26	-1.8
1,440,412	+		GFF1411	0.28	-0.5
1,440,420	-		GFF1411	0.29	-0.0
1,440,433	-		GFF1411	0.30	+1.2
1,440,435	+		GFF1411	0.30	+0.6
1,440,476	+		GFF1411	0.34	-1.2
1,440,476	+		GFF1411	0.34	+1.1
1,440,482	+		GFF1411	0.34	-0.5
1,440,482	+		GFF1411	0.34	+0.3
1,440,484	-		GFF1411	0.34	+0.7
1,440,501	+		GFF1411	0.36	-0.1
1,440,502	+		GFF1411	0.36	-2.0
1,440,502	+		GFF1411	0.36	-2.0
1,440,502	+		GFF1411	0.36	-1.1
1,440,502	+		GFF1411	0.36	-0.2
1,440,510	-		GFF1411	0.37	-0.1
1,440,511	-		GFF1411	0.37	-0.7
1,440,513	+		GFF1411	0.37	-0.8
1,440,521	-		GFF1411	0.38	-2.6
1,440,521	-		GFF1411	0.38	-0.7
1,440,521	-		GFF1411	0.38	-0.1
1,440,521	-		GFF1411	0.38	-1.3
1,440,543	+		GFF1411	0.39	-0.4
1,440,551	-		GFF1411	0.40	-1.9
1,440,579	+		GFF1411	0.42	+1.2
1,440,610	+		GFF1411	0.45	+0.8
1,440,610	+		GFF1411	0.45	-1.6
1,440,612	+		GFF1411	0.45	-2.1
1,440,612	+		GFF1411	0.45	+0.6
1,440,612	+		GFF1411	0.45	-0.9
1,440,612	+		GFF1411	0.45	-0.2
1,440,618	-		GFF1411	0.46	-1.6
1,440,618	-		GFF1411	0.46	-0.9
1,440,620	+		GFF1411	0.46	-0.8
1,440,620	-		GFF1411	0.46	+1.3
1,440,620	-		GFF1411	0.46	-1.8
1,440,620	-		GFF1411	0.46	+0.3
1,440,620	-		GFF1411	0.46	+0.0
1,440,632	+		GFF1411	0.47	-0.1
1,440,641	-		GFF1411	0.48	-1.9
1,440,642	-		GFF1411	0.48	+0.4
1,440,647	+		GFF1411	0.48	+0.3
1,440,647	+		GFF1411	0.48	-1.3
1,440,655	-		GFF1411	0.49	-0.3
1,440,655	-		GFF1411	0.49	-0.4
1,440,655	-		GFF1411	0.49	+0.8
1,440,655	-		GFF1411	0.49	+0.1
1,440,655	-		GFF1411	0.49	-2.5
1,440,655	-		GFF1411	0.49	-1.5
1,440,662	+		GFF1411	0.49	+1.4
1,440,665	-		GFF1411	0.50	-0.5
1,440,672	+		GFF1411	0.50	-1.3
1,440,672	+		GFF1411	0.50	+0.1
1,440,672	-		GFF1411	0.50	-0.9
1,440,708	-		GFF1411	0.53	+0.1
1,440,716	-		GFF1411	0.54	-1.5
1,440,735	-		GFF1411	0.55	-1.1
1,440,745	+		GFF1411	0.56	+0.5
1,440,795	+		GFF1411	0.60	-0.1
1,440,800	+		GFF1411	0.61	-0.1
1,440,800	+		GFF1411	0.61	-0.3
1,440,803	-		GFF1411	0.61	+0.9
1,440,808	-		GFF1411	0.62	-1.0
1,440,808	-		GFF1411	0.62	+0.3
1,440,845	-		GFF1411	0.65	+0.8
1,440,856	+		GFF1411	0.66	-0.5
1,440,884	+		GFF1411	0.68	-1.1
1,440,892	-		GFF1411	0.69	-0.6
1,440,898	+		GFF1411	0.69	-1.3
1,440,898	+		GFF1411	0.69	-0.2
1,440,898	+		GFF1411	0.69	+0.6
1,440,908	+		GFF1411	0.70	-0.1
1,440,909	-		GFF1411	0.70	+1.4
1,440,915	+		GFF1411	0.71	+0.2
1,440,916	-		GFF1411	0.71	+0.3
1,440,930	+		GFF1411	0.72	+0.5
1,440,935	+		GFF1411	0.72	+0.5
1,440,940	+		GFF1411	0.73	+1.2
1,440,948	-		GFF1411	0.73	-0.2
1,440,953	+		GFF1411	0.74	+0.2
1,440,960	-		GFF1411	0.74	-1.0
1,440,976	+		GFF1411	0.76	-0.0
1,440,976	+		GFF1411	0.76	+0.6
1,440,976	+		GFF1411	0.76	-1.4
1,440,981	+		GFF1411	0.76	-1.1
1,440,981	+		GFF1411	0.76	-2.4
1,440,988	+		GFF1411	0.77	+0.6
1,440,988	+		GFF1411	0.77	+0.2
1,440,988	+		GFF1411	0.77	-0.3
1,440,988	+		GFF1411	0.77	+1.8
1,440,988	+		GFF1411	0.77	+0.3
1,440,988	+		GFF1411	0.77	-0.1
1,440,989	-		GFF1411	0.77	+1.2
1,440,989	-		GFF1411	0.77	-0.1
1,440,996	-		GFF1411	0.77	+0.7
1,440,996	-		GFF1411	0.77	+0.7
1,440,996	-		GFF1411	0.77	+1.4
1,440,996	-		GFF1411	0.77	-1.0
1,440,996	-		GFF1411	0.77	-1.5
1,440,996	-		GFF1411	0.77	-0.7
1,440,996	-		GFF1411	0.77	-0.8
1,441,075	+		GFF1411	0.84	-0.2
1,441,078	-		GFF1411	0.84	-0.6
1,441,082	+		GFF1411	0.85	+1.1
1,441,083	-		GFF1411	0.85	-0.9
1,441,083	-		GFF1411	0.85	-1.4
1,441,083	-		GFF1411	0.85	-0.0
1,441,119	+		GFF1411	0.88	+1.0
1,441,127	+		GFF1411	0.88	+0.3
1,441,127	+		GFF1411	0.88	+0.2
1,441,174	-				+0.5
1,441,234	+				-1.4
1,441,234	+				-1.2
1,441,242	-				+0.2
1,441,242	-				-0.4
1,441,242	-				+0.6
1,441,245	+				+0.4
1,441,245	+				-0.9
1,441,245	+				+0.1
1,441,245	+				-0.0
1,441,245	+				-0.9
1,441,245	+				+0.7
1,441,245	+				-0.5
1,441,253	-				+0.5
1,441,253	-				+0.2
1,441,253	-				-0.8
1,441,253	-				+0.4
1,441,253	-				-0.5
1,441,253	-				-0.2
1,441,253	-				-0.8
1,441,253	-				+0.5
1,441,253	-				-1.1
1,441,253	-				-0.5
1,441,274	+				-0.4
1,441,280	+				+0.6
1,441,280	+				-0.8
1,441,280	+				-0.7
1,441,282	-				-0.3
1,441,282	-				-0.8
1,441,288	-				-0.6
1,441,288	-				-0.2
1,441,288	-				+0.8
1,441,304	+				+0.3
1,441,312	-				+0.5
1,441,326	+				-0.1
1,441,331	+				-1.4
1,441,332	-				+0.4
1,441,351	-				-2.3
1,441,373	+				+0.3
1,441,398	-				-0.7
1,441,405	-		GFF1412	0.10	+1.2
1,441,405	-		GFF1412	0.10	-0.2
1,441,406	+		GFF1412	0.10	+0.0
1,441,431	+		GFF1412	0.13	-0.1
1,441,431	+		GFF1412	0.13	-0.2
1,441,439	-		GFF1412	0.13	-1.4
1,441,439	-		GFF1412	0.13	-1.7
1,441,439	-		GFF1412	0.13	-1.4
1,441,439	-		GFF1412	0.13	+0.5
1,441,463	-		GFF1412	0.15	-0.3
1,441,463	-		GFF1412	0.15	-0.8
1,441,497	-		GFF1412	0.18	-1.5
1,441,499	+		GFF1412	0.18	-1.4
1,441,507	-		GFF1412	0.19	-0.4
1,441,507	-		GFF1412	0.19	+1.3
1,441,514	-		GFF1412	0.20	-0.1
1,441,543	+		GFF1412	0.22	-1.0
1,441,545	+		GFF1412	0.22	+0.1
1,441,545	+		GFF1412	0.22	-0.5
1,441,553	-		GFF1412	0.23	-0.7
1,441,570	+		GFF1412	0.24	-0.4
1,441,575	+		GFF1412	0.25	-0.7
1,441,580	+		GFF1412	0.25	-1.7
1,441,580	+		GFF1412	0.25	-0.0
1,441,589	-		GFF1412	0.26	+0.2
1,441,596	-		GFF1412	0.27	-0.6
1,441,596	-		GFF1412	0.27	-0.3
1,441,654	-		GFF1412	0.32	-1.0
1,441,668	+		GFF1412	0.33	+0.1
1,441,684	+		GFF1412	0.34	+0.1
1,441,692	-		GFF1412	0.35	+0.2
1,441,705	+		GFF1412	0.36	-2.3
1,441,708	+		GFF1412	0.36	-1.8
1,441,708	+		GFF1412	0.36	-0.7
1,441,716	-		GFF1412	0.37	-0.7
1,441,717	+		GFF1412	0.37	+0.3
1,441,747	+		GFF1412	0.39	-0.4
1,441,762	+		GFF1412	0.41	+0.3
1,441,765	-		GFF1412	0.41	-1.2
1,441,766	-		GFF1412	0.41	-0.5
1,441,775	+		GFF1412	0.42	+0.7
1,441,780	+		GFF1412	0.42	-2.4
1,441,783	-		GFF1412	0.43	+0.9
1,441,783	-		GFF1412	0.43	+0.2
1,441,783	-		GFF1412	0.43	+0.2
1,441,798	+		GFF1412	0.44	-1.5
1,441,811	+		GFF1412	0.45	+0.0
1,441,867	-		GFF1412	0.50	+0.2
1,441,876	+		GFF1412	0.50	+0.8
1,441,877	+		GFF1412	0.51	-0.4
1,441,885	-		GFF1412	0.51	-1.0
1,441,885	-		GFF1412	0.51	-0.9
1,441,885	-		GFF1412	0.51	-2.1
1,441,889	-		GFF1412	0.52	-0.6
1,441,900	-		GFF1412	0.53	+0.9
1,441,913	+		GFF1412	0.54	-0.0
1,441,932	-		GFF1412	0.55	-0.1
1,441,932	-		GFF1412	0.55	+0.7
1,441,936	-		GFF1412	0.56	-1.8
1,441,938	+		GFF1412	0.56	-0.5
1,441,945	-		GFF1412	0.56	+0.9
1,441,958	+		GFF1412	0.57	+0.3
1,441,958	+		GFF1412	0.57	-0.2
1,441,966	-		GFF1412	0.58	-1.6
1,441,966	-		GFF1412	0.58	-0.4
1,441,966	-		GFF1412	0.58	-0.4
1,441,966	-		GFF1412	0.58	+0.2
1,441,966	-		GFF1412	0.58	-0.6
1,441,973	+		GFF1412	0.59	+0.2
1,441,973	+		GFF1412	0.59	-1.4
1,441,978	+		GFF1412	0.59	-0.0
1,442,011	+		GFF1412	0.62	-1.0
1,442,011	+		GFF1412	0.62	-0.3
1,442,011	+		GFF1412	0.62	-1.6
1,442,019	-		GFF1412	0.63	-1.7
1,442,030	+		GFF1412	0.64	+0.1
1,442,031	-		GFF1412	0.64	-0.3
1,442,034	-		GFF1412	0.64	-1.4
1,442,038	-		GFF1412	0.64	-1.3
1,442,044	-		GFF1412	0.65	+0.4
1,442,048	+		GFF1412	0.65	-1.5
1,442,066	+		GFF1412	0.67	+1.0
1,442,073	+		GFF1412	0.67	-0.5
1,442,092	+		GFF1412	0.69	-1.8
1,442,100	-		GFF1412	0.70	+0.2
1,442,117	-		GFF1412	0.71	-1.4
1,442,127	-		GFF1412	0.72	-1.9
1,442,132	-		GFF1412	0.72	-0.8
1,442,140	-		GFF1412	0.73	-1.0
1,442,146	-		GFF1412	0.73	-2.2
1,442,148	+		GFF1412	0.74	-0.7
1,442,156	-		GFF1412	0.74	+0.6
1,442,174	-		GFF1412	0.76	+0.4
1,442,190	+		GFF1412	0.77	-2.6
1,442,190	+		GFF1412	0.77	-1.3
1,442,190	+		GFF1412	0.77	-0.8
1,442,190	+		GFF1412	0.77	+1.5
1,442,190	+		GFF1412	0.77	+2.2
1,442,190	+		GFF1412	0.77	-0.5
1,442,190	+		GFF1412	0.77	-0.8
1,442,190	+		GFF1412	0.77	+0.7
1,442,190	+		GFF1412	0.77	+0.7
1,442,190	+		GFF1412	0.77	+1.0
1,442,190	+		GFF1412	0.77	+0.1
1,442,190	+		GFF1412	0.77	+0.7
1,442,198	-		GFF1412	0.78	-1.7
1,442,198	-		GFF1412	0.78	+0.3
1,442,198	-		GFF1412	0.78	-0.4
1,442,198	-		GFF1412	0.78	-1.4
1,442,198	-		GFF1412	0.78	-0.5
1,442,198	-		GFF1412	0.78	-0.7
1,442,198	-		GFF1412	0.78	-0.7
1,442,198	-		GFF1412	0.78	+0.6
1,442,198	-		GFF1412	0.78	-0.1
1,442,219	+		GFF1412	0.80	+0.3
1,442,227	-		GFF1412	0.80	-1.0
1,442,234	+		GFF1412	0.81	-0.4
1,442,238	+		GFF1412	0.81	-1.0
1,442,238	+		GFF1412	0.81	+0.8
1,442,246	-		GFF1412	0.82	-2.0
1,442,246	-		GFF1412	0.82	-0.3
1,442,248	+		GFF1412	0.82	-0.4
1,442,248	+		GFF1412	0.82	-0.6
1,442,262	+		GFF1412	0.83	+0.3
1,442,262	+		GFF1412	0.83	-1.2
1,442,262	+		GFF1412	0.83	-2.8
1,442,262	+		GFF1412	0.83	-1.7
1,442,262	+		GFF1412	0.83	+0.2
1,442,262	+		GFF1412	0.83	+1.7
1,442,262	+		GFF1412	0.83	+0.5
1,442,262	+		GFF1412	0.83	-0.4
1,442,270	-		GFF1412	0.84	-0.3
1,442,270	-		GFF1412	0.84	-1.0
1,442,270	-		GFF1412	0.84	-0.4
1,442,270	-		GFF1412	0.84	-0.5
1,442,270	-		GFF1412	0.84	-0.5
1,442,317	+		GFF1412	0.88	-0.1
1,442,317	+		GFF1412	0.88	-2.2
1,442,317	+		GFF1412	0.88	-0.4
1,442,317	+		GFF1412	0.88	-0.3
1,442,317	+		GFF1412	0.88	-0.9
1,442,321	+		GFF1412	0.88	-0.4
1,442,331	+		GFF1412	0.89	-0.8
1,442,340	-				+0.1
1,442,343	+				-0.6
1,442,372	-				-0.9
1,442,386	-				+0.3
1,442,405	-				+0.1
1,442,412	+				+1.2
1,442,412	+				-1.6
1,442,412	+				+0.1
1,442,412	+				-1.3
1,442,412	+				-1.2
1,442,412	+				+0.4
1,442,412	+				-1.5
1,442,412	+				+0.2
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