Strain Fitness in Sphingobium sp. HT1-2 around GFF4694

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
4,694,474	+		GFF4692	0.77	-0.8
4,694,482	-		GFF4692	0.78	+0.1
4,694,482	-		GFF4692	0.78	-0.0
4,694,499	+		GFF4692	0.79	+1.3
4,694,499	+		GFF4692	0.79	+0.2
4,694,499	+		GFF4692	0.79	-1.3
4,694,505	-		GFF4692	0.80	+0.8
4,694,507	-		GFF4692	0.80	+0.3
4,694,557	-		GFF4692	0.84	-1.2
4,694,568	+		GFF4692	0.84	+0.2
4,694,568	+		GFF4692	0.84	+0.1
4,694,576	+		GFF4692	0.85	+0.8
4,694,576	-		GFF4692	0.85	+0.7
4,694,649	+				-1.8
4,694,650	-				-1.0
4,694,656	+				-0.1
4,694,658	-				+0.8
4,694,659	-				-1.0
4,694,692	-				-0.0
4,694,697	+				+1.6
4,694,697	+				-0.8
4,694,697	-				+0.5
4,694,739	+				+2.2
4,694,747	-				+2.2
4,694,747	-				+0.3
4,694,777	+				+0.5
4,694,777	+				-2.4
4,694,778	+				+0.5
4,694,778	+				+0.0
4,694,785	-				+1.0
4,694,785	-				-2.1
4,694,786	-				+1.2
4,694,786	-				-0.0
4,694,786	-				+1.1
4,694,786	-				-1.1
4,694,786	-				-0.8
4,694,796	-				+0.1
4,694,821	+		GFF4693	0.14	+0.6
4,694,821	+		GFF4693	0.14	+1.6
4,694,821	+		GFF4693	0.14	+0.5
4,694,829	-		GFF4693	0.17	+0.2
4,694,829	-		GFF4693	0.17	+0.2
4,694,829	-		GFF4693	0.17	+0.5
4,694,829	-		GFF4693	0.17	-0.3
4,694,829	-		GFF4693	0.17	+0.5
4,694,831	+		GFF4693	0.18	-0.5
4,694,831	+		GFF4693	0.18	+0.9
4,694,831	+		GFF4693	0.18	+0.6
4,694,831	+		GFF4693	0.18	+1.7
4,694,831	+		GFF4693	0.18	-0.1
4,694,831	+		GFF4693	0.18	+0.5
4,694,831	+		GFF4693	0.18	-1.3
4,694,838	+		GFF4693	0.21	-0.9
4,694,839	-		GFF4693	0.21	+1.5
4,694,839	-		GFF4693	0.21	-0.9
4,694,839	-		GFF4693	0.21	-2.3
4,694,839	-		GFF4693	0.21	+0.2
4,694,839	-		GFF4693	0.21	+0.2
4,694,839	-		GFF4693	0.21	-0.0
4,694,839	-		GFF4693	0.21	+0.2
4,694,839	-		GFF4693	0.21	+0.9
4,694,839	-		GFF4693	0.21	+0.3
4,694,839	-		GFF4693	0.21	+0.8
4,694,846	-		GFF4693	0.24	+0.5
4,694,846	-		GFF4693	0.24	+0.3
4,694,846	-		GFF4693	0.24	+1.1
4,694,846	-		GFF4693	0.24	+0.4
4,694,846	-		GFF4693	0.24	-1.8
4,694,849	+		GFF4693	0.25	+0.5
4,694,857	-		GFF4693	0.28	-1.3
4,694,867	+		GFF4693	0.31	-1.8
4,694,867	+		GFF4693	0.31	+1.0
4,694,867	+		GFF4693	0.31	-0.5
4,694,884	+		GFF4693	0.37	-0.2
4,694,889	+		GFF4693	0.39	+0.4
4,694,891	-		GFF4693	0.40	+0.4
4,694,892	-		GFF4693	0.40	+0.5
4,694,892	-		GFF4693	0.40	-0.4
4,694,910	+		GFF4693	0.47	+1.5
4,694,913	-		GFF4693	0.48	-0.3
4,694,915	+		GFF4693	0.49	-0.6
4,694,915	+		GFF4693	0.49	+1.3
4,694,918	-		GFF4693	0.50	+0.5
4,694,932	+		GFF4693	0.55	-0.8
4,694,932	+		GFF4693	0.55	-0.2
4,694,932	+		GFF4693	0.55	+0.8
4,694,932	+		GFF4693	0.55	-0.4
4,694,932	+		GFF4693	0.55	+0.2
4,694,932	+		GFF4693	0.55	-1.8
4,694,932	+		GFF4693	0.55	+1.0
4,694,932	+		GFF4693	0.55	+1.7
4,694,932	+		GFF4693	0.55	+0.8
4,694,934	+		GFF4693	0.55	+0.2
4,694,935	-		GFF4693	0.56	+0.8
4,694,935	-		GFF4693	0.56	-0.8
4,694,937	+		GFF4693	0.57	-1.3
4,694,937	+		GFF4693	0.57	+0.2
4,694,940	-		GFF4693	0.58	-0.6
4,694,940	-		GFF4693	0.58	-0.6
4,694,940	-		GFF4693	0.58	-0.0
4,694,940	-		GFF4693	0.58	+1.5
4,694,940	-		GFF4693	0.58	-0.6
4,694,940	-		GFF4693	0.58	+0.5
4,694,940	-		GFF4693	0.58	+0.3
4,694,941	-		GFF4693	0.58	+0.9
4,694,961	-		GFF4693	0.65	+1.5
4,694,983	+		GFF4693	0.73	+1.0
4,694,983	+		GFF4693	0.73	-1.9
4,694,983	+		GFF4693	0.73	+0.1
4,694,983	+		GFF4693	0.73	+0.6
4,694,986	-		GFF4693	0.74	-0.2
4,694,991	-		GFF4693	0.76	+1.0
4,695,009	+		GFF4693	0.83	+0.2
4,695,080	+				+1.3
4,695,080	+				-0.0
4,695,098	+				+0.6
4,695,098	+				+1.7
4,695,106	-				-0.8
4,695,111	+				-0.2
4,695,140	-				+0.3
4,695,187	+				-1.8
4,695,187	+				+1.2
4,695,195	+				-1.0
4,695,195	-				-0.5
4,695,208	-				-0.5
4,695,214	-				+0.2
4,695,216	+				-1.8
4,695,242	-				-1.2
4,695,263	+				+1.3
4,695,263	+				+0.1
4,695,263	+				+1.8
4,695,268	+				-0.3
4,695,271	-				+0.7
4,695,276	-				-0.6
4,695,294	+				+0.5
4,695,328	+				-0.0
4,695,341	+				-0.3
4,695,344	-				-2.1
4,695,344	-				-0.4
4,695,344	-				-0.3
4,695,344	-				+0.2
4,695,369	+				+0.3
4,695,369	+				-1.6
4,695,379	+				-0.1
4,695,379	+				+1.7
4,695,399	+				+0.2
4,695,404	+				-0.2
4,695,407	-				+0.4
4,695,407	-				+1.0
4,695,407	-				+0.7
4,695,407	-				-0.3
4,695,407	-				+0.5
4,695,410	+				+0.1
4,695,410	+				-0.6
4,695,410	+				+0.1
4,695,415	+				-0.8
4,695,415	+				-0.9
4,695,415	+				-0.4
4,695,415	+				-0.4
4,695,418	-				-0.6
4,695,418	-				+0.8
4,695,418	-				-0.7
4,695,418	-				+1.0
4,695,418	-				-1.6
4,695,418	-				-0.5
4,695,418	-				-1.6
4,695,420	+				+0.6
4,695,443	+				+2.0
4,695,449	-				-1.1
4,695,464	+				+0.0
4,695,464	+				+0.2
4,695,464	+				-0.8
4,695,464	+				+0.9
4,695,464	+				+1.4
4,695,472	-				-0.6
4,695,472	-				+0.1
4,695,472	-				-0.5
4,695,472	-				+0.7
4,695,477	+				-0.4
4,695,493	-				+0.5
4,695,503	-				+0.7
4,695,503	-				-0.0
4,695,526	-				+0.1
4,695,526	-				+0.1
4,695,537	+		GFF4694	0.11	+1.4
4,695,538	+		GFF4694	0.11	+1.1
4,695,542	+		GFF4694	0.12	+0.5
4,695,558	+		GFF4694	0.14	-0.4
4,695,558	+		GFF4694	0.14	+1.7
4,695,561	-		GFF4694	0.14	+0.6
4,695,561	-		GFF4694	0.14	+0.2
4,695,561	-		GFF4694	0.14	+0.3
4,695,566	-		GFF4694	0.15	-0.7
4,695,586	+		GFF4694	0.18	-0.7
4,695,586	-		GFF4694	0.18	+0.1
4,695,594	-		GFF4694	0.20	+1.4
4,695,594	-		GFF4694	0.20	-1.6
4,695,607	+		GFF4694	0.22	+0.8
4,695,610	-		GFF4694	0.22	+0.2
4,695,616	+		GFF4694	0.23	-0.1
4,695,624	-		GFF4694	0.24	+0.0
4,695,653	-		GFF4694	0.29	-1.5
4,695,660	-		GFF4694	0.30	-1.1
4,695,669	+		GFF4694	0.31	-0.2
4,695,672	+		GFF4694	0.31	-1.3
4,695,678	-		GFF4694	0.32	-1.3
4,695,688	-		GFF4694	0.34	+0.4
4,695,734	+		GFF4694	0.41	+0.2
4,695,740	-		GFF4694	0.42	-0.9
4,695,746	-		GFF4694	0.43	+0.8
4,695,764	+		GFF4694	0.46	+0.4
4,695,778	-		GFF4694	0.48	-0.6
4,695,793	+		GFF4694	0.50	-0.4
4,695,822	-		GFF4694	0.55	-0.9
4,695,824	+		GFF4694	0.55	+0.1
4,695,826	+		GFF4694	0.55	+0.2
4,695,850	+		GFF4694	0.59	+0.5
4,695,858	-		GFF4694	0.60	+0.2
4,695,864	+		GFF4694	0.61	+0.7
4,695,872	-		GFF4694	0.62	-0.6
4,695,872	-		GFF4694	0.62	-1.6
4,695,879	+		GFF4694	0.63	-0.9
4,695,880	-		GFF4694	0.63	-0.1
4,695,884	+		GFF4694	0.64	-0.3
4,695,884	+		GFF4694	0.64	-1.5
4,695,890	+		GFF4694	0.65	+0.4
4,695,892	-		GFF4694	0.65	-0.8
4,695,892	-		GFF4694	0.65	+0.4
4,695,896	+		GFF4694	0.66	-1.5
4,695,896	+		GFF4694	0.66	-1.2
4,695,896	+		GFF4694	0.66	-0.5
4,695,896	+		GFF4694	0.66	-0.5
4,695,896	+		GFF4694	0.66	+0.7
4,695,896	+		GFF4694	0.66	-0.3
4,695,896	+		GFF4694	0.66	+1.2
4,695,896	+		GFF4694	0.66	+0.6
4,695,896	+		GFF4694	0.66	-0.8
4,695,897	-		GFF4694	0.66	-2.0
4,695,904	-		GFF4694	0.67	+0.2
4,695,904	-		GFF4694	0.67	+0.7
4,695,904	-		GFF4694	0.67	+1.9
4,695,904	-		GFF4694	0.67	-0.0
4,695,904	-		GFF4694	0.67	-1.0
4,695,904	-		GFF4694	0.67	-0.0
4,695,904	-		GFF4694	0.67	+0.5
4,695,904	-		GFF4694	0.67	+1.0
4,695,910	-		GFF4694	0.68	-0.6
4,695,926	+		GFF4694	0.71	-1.8
4,695,934	+		GFF4694	0.72	+0.3
4,695,942	-		GFF4694	0.73	+1.0
4,695,942	-		GFF4694	0.73	-0.8
4,695,942	-		GFF4694	0.73	+0.6
4,695,942	-		GFF4694	0.73	+0.1
4,695,942	-		GFF4694	0.73	+1.8
4,695,984	+		GFF4694	0.79	+2.5
4,695,987	-		GFF4694	0.80	+0.8
4,695,987	-		GFF4694	0.80	+0.3
4,695,989	+		GFF4694	0.80	-1.5
4,695,990	-		GFF4694	0.80	+0.8
4,695,992	-		GFF4694	0.81	-0.2
4,695,994	+		GFF4694	0.81	+0.2
4,695,994	+		GFF4694	0.81	-1.6
4,695,994	+		GFF4694	0.81	-0.2
4,695,994	+		GFF4694	0.81	+0.4
4,695,994	+		GFF4694	0.81	+0.6
4,695,994	+		GFF4694	0.81	-0.2
4,695,994	+		GFF4694	0.81	+0.1
4,695,994	+		GFF4694	0.81	-0.2
4,695,994	+		GFF4694	0.81	-0.1
4,695,994	+		GFF4694	0.81	-0.3
4,696,002	+		GFF4694	0.82	+0.1
4,696,002	+		GFF4694	0.82	-0.4
4,696,002	-		GFF4694	0.82	-0.1
4,696,002	-		GFF4694	0.82	+1.0
4,696,002	-		GFF4694	0.82	-1.0
4,696,002	-		GFF4694	0.82	+1.5
4,696,004	+		GFF4694	0.82	+0.6
4,696,010	-		GFF4694	0.83	-1.0
4,696,018	-		GFF4694	0.85	-1.6
4,696,018	-		GFF4694	0.85	+0.5
4,696,030	+		GFF4694	0.86	-1.3
4,696,030	+		GFF4694	0.86	-2.2
4,696,030	+		GFF4694	0.86	-2.0
4,696,030	+		GFF4694	0.86	+1.0
4,696,038	-		GFF4694	0.88	-0.1
4,696,038	-		GFF4694	0.88	-1.9
4,696,038	-		GFF4694	0.88	+0.9
4,696,038	-		GFF4694	0.88	+0.7
4,696,038	-		GFF4694	0.88	-0.8
4,696,038	-		GFF4694	0.88	-1.2
4,696,045	+		GFF4694	0.89	-0.2
4,696,053	-				-1.9
4,696,053	-				-0.5
4,696,055	+				-2.2
4,696,058	-				+0.7
4,696,058	-				-0.6
4,696,063	-				+0.7
4,696,064	+				+1.2
4,696,064	+				-0.9
4,696,064	+				-0.6
4,696,072	-				+0.3
4,696,072	-				-0.4
4,696,072	-				+0.6
4,696,087	+				+0.1
4,696,094	+				+0.5
4,696,094	+				+1.2
4,696,094	-				+0.3
4,696,095	-				-3.0
4,696,102	-				-1.6
4,696,126	-				+0.2
4,696,145	-				-0.8
4,696,155	+				+1.0
4,696,175	+				-1.1
4,696,183	-				-0.1
4,696,183	-				+0.2
4,696,183	-				+0.5
4,696,184	+				-0.4
4,696,195	+				+0.8
4,696,442	+				-0.5
4,696,450	-				+0.8
4,696,463	+				+0.7
4,696,529	+				+0.3
4,696,529	+				+0.8
4,696,529	+				-0.3
4,696,529	+				+2.0
4,696,529	+				+1.0
4,696,529	+				-0.4
4,696,537	-				+1.1
4,696,537	-				-0.2
4,696,537	-				+1.5
4,696,537	-				-1.0
4,696,537	-				+0.2
4,696,554	+				+1.1
4,696,573	+				+0.4
4,696,574	+				+0.4
4,696,574	+				+0.1
4,696,582	-				-0.8
4,696,617	-				+0.9
4,696,659	-				-0.3
4,696,674	+				+0.1
4,696,676	+				-0.1
4,696,701	+				-0.4
4,696,709	-				-0.0
4,696,709	-				-0.1
4,696,714	-				+0.2
4,696,742	-				+1.4
4,696,751	+				-0.6
4,696,761	+				-0.5
4,696,769	-				+0.4
4,696,769	-				+0.6
4,696,777	-				+0.6
4,696,783	+				-1.0
4,696,832	+				+1.7
4,696,832	+				-1.0
4,696,832	+				-0.0
4,696,832	+				+0.4
4,696,832	+				+0.4
4,696,832	+				-1.6
4,696,832	+				-0.1
4,696,832	+				+0.5
4,696,840	-				+0.9
4,696,840	-				-2.0
4,696,840	-				+0.0
4,696,840	-				+0.7
4,696,840	-				+0.3
4,696,840	-				+0.7
4,696,840	-				-0.6
4,696,840	-				+0.3
4,696,842	+				+0.8
4,696,847	+				-0.8
4,696,850	-				-0.8
4,696,850	-				-0.2
4,696,853	+				-0.9
4,696,861	+				-0.5
4,696,866	+				-0.8
4,696,871	-				+0.8
4,696,874	-				-1.1
4,696,874	-				-0.7
4,696,887	+				-0.7
4,696,887	+				-0.2
4,696,887	+				-0.6
4,696,887	+				+0.7
4,696,891	-				-0.6
4,696,895	-				-0.1
4,696,895	-				+0.9
4,696,906	+				-2.1
4,696,906	+				-0.8
4,696,914	-				+1.4
4,696,914	-				+1.8
4,696,914	-				+1.2
4,696,919	+				+0.7
4,696,919	+				+0.9
4,696,921	+				-0.8
4,696,921	+				-1.8
4,696,921	+				-0.4
4,696,921	+				-0.0
4,696,929	-				-2.0
4,696,929	-				-0.4
4,696,929	-				-0.1
4,696,929	-				-2.0
4,696,929	-				+1.2
4,696,929	-				+0.2
4,696,929	-				+0.3
4,696,934	-				+0.4
4,696,952	+				+1.1
4,696,952	+				-0.0
4,696,952	+				-0.8
4,696,952	+				-0.6
4,696,952	+				+0.6
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