Strain Fitness in Sphingobium sp. HT1-2 around GFF4592

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
4,584,262	-				+0.5
4,584,262	-				+0.4
4,584,262	-				-0.8
4,584,264	-				+0.6
4,584,264	-				-1.6
4,584,264	-				-1.5
4,584,264	-				-1.2
4,584,264	-				+1.2
4,584,264	-				+0.3
4,584,282	+				-1.4
4,584,285	-				-0.4
4,584,292	-				-0.9
4,584,301	+				-0.2
4,584,309	-				-0.1
4,584,368	+		GFF4591	0.13	+1.5
4,584,368	+		GFF4591	0.13	-0.2
4,584,368	+		GFF4591	0.13	-0.4
4,584,368	+		GFF4591	0.13	-0.7
4,584,368	+		GFF4591	0.13	-1.5
4,584,368	+		GFF4591	0.13	-2.1
4,584,368	+		GFF4591	0.13	+0.3
4,584,368	+		GFF4591	0.13	+0.6
4,584,376	-		GFF4591	0.14	+0.2
4,584,376	-		GFF4591	0.14	+0.9
4,584,376	-		GFF4591	0.14	+0.2
4,584,376	-		GFF4591	0.14	-0.8
4,584,376	-		GFF4591	0.14	-0.4
4,584,376	-		GFF4591	0.14	+1.1
4,584,376	-		GFF4591	0.14	-0.3
4,584,376	-		GFF4591	0.14	+1.1
4,584,376	-		GFF4591	0.14	-0.8
4,584,376	-		GFF4591	0.14	-0.3
4,584,376	-		GFF4591	0.14	-0.1
4,584,376	-		GFF4591	0.14	-1.3
4,584,376	-		GFF4591	0.14	-1.2
4,584,376	-		GFF4591	0.14	+0.5
4,584,386	-		GFF4591	0.15	+0.6
4,584,392	-		GFF4591	0.16	-1.7
4,584,408	+		GFF4591	0.17	-1.0
4,584,421	-		GFF4591	0.19	-0.9
4,584,476	+		GFF4591	0.25	+0.2
4,584,476	+		GFF4591	0.25	+0.6
4,584,484	-		GFF4591	0.25	-0.9
4,584,484	-		GFF4591	0.25	-0.6
4,584,495	+		GFF4591	0.26	-0.3
4,584,501	-		GFF4591	0.27	-1.7
4,584,503	+		GFF4591	0.27	-0.3
4,584,503	+		GFF4591	0.27	+0.2
4,584,503	+		GFF4591	0.27	-0.1
4,584,503	+		GFF4591	0.27	-1.1
4,584,503	-		GFF4591	0.27	-0.8
4,584,503	-		GFF4591	0.27	+0.2
4,584,504	+		GFF4591	0.27	-0.2
4,584,511	+		GFF4591	0.28	-0.4
4,584,511	-		GFF4591	0.28	-0.5
4,584,511	-		GFF4591	0.28	+0.9
4,584,511	-		GFF4591	0.28	-0.2
4,584,511	-		GFF4591	0.28	-0.9
4,584,511	-		GFF4591	0.28	+0.3
4,584,511	-		GFF4591	0.28	-0.8
4,584,511	-		GFF4591	0.28	+0.2
4,584,511	-		GFF4591	0.28	-1.7
4,584,512	+		GFF4591	0.28	-1.0
4,584,512	+		GFF4591	0.28	-0.9
4,584,512	+		GFF4591	0.28	-1.9
4,584,512	+		GFF4591	0.28	-0.7
4,584,512	+		GFF4591	0.28	-0.4
4,584,512	-		GFF4591	0.28	+0.6
4,584,512	-		GFF4591	0.28	+2.0
4,584,517	+		GFF4591	0.29	-1.4
4,584,518	+		GFF4591	0.29	+0.5
4,584,520	-		GFF4591	0.29	+1.4
4,584,520	-		GFF4591	0.29	+0.7
4,584,525	-		GFF4591	0.30	-2.0
4,584,539	+		GFF4591	0.31	-0.3
4,584,542	-		GFF4591	0.31	-0.1
4,584,545	+		GFF4591	0.32	-1.2
4,584,553	-		GFF4591	0.33	-1.4
4,584,555	+		GFF4591	0.33	+1.5
4,584,572	+		GFF4591	0.35	+1.8
4,584,591	+		GFF4591	0.37	-0.3
4,584,591	+		GFF4591	0.37	-1.1
4,584,591	+		GFF4591	0.37	-4.1
4,584,591	+		GFF4591	0.37	-0.2
4,584,599	-		GFF4591	0.37	+0.5
4,584,599	-		GFF4591	0.37	-0.8
4,584,601	+		GFF4591	0.38	+0.5
4,584,610	+		GFF4591	0.39	-0.6
4,584,614	-		GFF4591	0.39	-0.4
4,584,634	-		GFF4591	0.41	-0.1
4,584,652	-		GFF4591	0.43	-0.2
4,584,656	+		GFF4591	0.43	+0.3
4,584,657	-		GFF4591	0.44	-0.7
4,584,661	+		GFF4591	0.44	-0.4
4,584,718	+		GFF4591	0.50	+0.5
4,584,718	-		GFF4591	0.50	-0.8
4,584,726	+		GFF4591	0.51	-1.8
4,584,734	-		GFF4591	0.52	-1.1
4,584,734	-		GFF4591	0.52	-0.4
4,584,734	-		GFF4591	0.52	-0.3
4,584,746	-		GFF4591	0.53	-0.6
4,584,753	-		GFF4591	0.54	-2.1
4,584,766	+		GFF4591	0.55	-2.4
4,584,775	+		GFF4591	0.56	-1.2
4,584,778	+		GFF4591	0.56	+0.4
4,584,780	+		GFF4591	0.56	-1.3
4,584,780	+		GFF4591	0.56	+0.6
4,584,780	+		GFF4591	0.56	+0.7
4,584,787	+		GFF4591	0.57	-1.0
4,584,787	+		GFF4591	0.57	+0.2
4,584,787	+		GFF4591	0.57	+0.9
4,584,788	-		GFF4591	0.57	-0.6
4,584,788	-		GFF4591	0.57	+0.0
4,584,797	+		GFF4591	0.58	-2.4
4,584,800	-		GFF4591	0.59	+1.0
4,584,805	-		GFF4591	0.59	-1.1
4,584,812	+		GFF4591	0.60	-0.7
4,584,812	+		GFF4591	0.60	-1.3
4,584,823	+		GFF4591	0.61	+0.3
4,584,850	+		GFF4591	0.64	-0.6
4,584,860	+		GFF4591	0.65	-0.3
4,584,861	+		GFF4591	0.65	-1.9
4,584,861	+		GFF4591	0.65	+0.8
4,584,869	-		GFF4591	0.66	+0.7
4,584,876	+		GFF4591	0.67	-0.8
4,584,879	+		GFF4591	0.67	-1.1
4,584,884	-		GFF4591	0.67	-1.8
4,584,884	-		GFF4591	0.67	-0.6
4,584,912	-		GFF4591	0.70	+1.0
4,584,915	+		GFF4591	0.71	+0.0
4,584,920	+		GFF4591	0.71	-1.1
4,584,920	+		GFF4591	0.71	-0.3
4,584,923	-		GFF4591	0.72	-1.2
4,584,928	-		GFF4591	0.72	-0.1
4,584,928	-		GFF4591	0.72	+0.3
4,584,940	-		GFF4591	0.73	-0.9
4,584,941	+		GFF4591	0.73	-2.4
4,584,941	+		GFF4591	0.73	+0.6
4,584,941	+		GFF4591	0.73	-0.6
4,584,941	+		GFF4591	0.73	+0.1
4,584,941	+		GFF4591	0.73	+0.4
4,584,941	+		GFF4591	0.73	+1.2
4,584,941	+		GFF4591	0.73	-0.7
4,584,941	+		GFF4591	0.73	+0.7
4,584,941	+		GFF4591	0.73	-0.2
4,584,941	+		GFF4591	0.73	+0.6
4,584,941	+		GFF4591	0.73	-0.3
4,584,941	+		GFF4591	0.73	+1.8
4,584,943	+		GFF4591	0.74	-1.0
4,584,949	-		GFF4591	0.74	-0.6
4,584,949	-		GFF4591	0.74	-0.3
4,584,949	-		GFF4591	0.74	+0.5
4,584,949	-		GFF4591	0.74	-1.4
4,584,949	-		GFF4591	0.74	+0.5
4,584,949	-		GFF4591	0.74	-2.1
4,584,949	-		GFF4591	0.74	-0.1
4,584,949	-		GFF4591	0.74	+0.4
4,584,949	-		GFF4591	0.74	-1.0
4,584,949	-		GFF4591	0.74	-0.2
4,584,954	-		GFF4591	0.75	+0.3
4,584,959	-		GFF4591	0.75	-0.9
4,584,966	+		GFF4591	0.76	+0.5
4,584,974	-		GFF4591	0.77	-0.8
4,584,982	-		GFF4591	0.78	-0.5
4,585,020	+		GFF4591	0.82	+1.4
4,585,028	-		GFF4591	0.83	-1.2
4,585,030	+		GFF4591	0.83	-1.0
4,585,033	-		GFF4591	0.83	+0.5
4,585,033	-		GFF4591	0.83	-3.8
4,585,048	+		GFF4591	0.85	-0.1
4,585,058	-		GFF4591	0.86	+0.7
4,585,066	+		GFF4591	0.87	+0.2
4,585,074	-		GFF4591	0.87	-0.8
4,585,081	+		GFF4591	0.88	-2.5
4,585,081	+		GFF4591	0.88	+0.3
4,585,084	+		GFF4591	0.88	-1.4
4,585,084	-		GFF4591	0.88	+0.2
4,585,086	+		GFF4591	0.89	+0.5
4,585,086	+		GFF4591	0.89	-0.0
4,585,094	-		GFF4591	0.89	-0.7
4,585,094	-		GFF4591	0.89	+1.8
4,585,102	+				-1.9
4,585,108	+				+0.2
4,585,129	+				-0.1
4,585,136	+				-0.1
4,585,140	+				+0.0
4,585,141	+				+0.7
4,585,149	-				+0.5
4,585,164	+				-1.8
4,585,164	+				+0.5
4,585,164	+				-0.6
4,585,164	+				+0.9
4,585,167	+				+0.6
4,585,169	+				-0.3
4,585,169	+				-0.9
4,585,169	+				+0.4
4,585,169	+				-3.2
4,585,172	-				-1.0
4,585,172	-				-0.0
4,585,172	-				-0.2
4,585,172	-				+0.8
4,585,172	-				-0.4
4,585,172	-				-1.6
4,585,177	-				-0.7
4,585,177	-				-0.8
4,585,182	-				-0.3
4,585,201	-				-0.4
4,585,207	+				-2.4
4,585,207	+				+0.9
4,585,208	+				-1.7
4,585,208	+				-0.0
4,585,213	+				-2.1
4,585,213	+				+0.8
4,585,213	+				-0.7
4,585,213	+				-0.8
4,585,215	-				-0.4
4,585,216	-				-1.7
4,585,216	-				+0.7
4,585,216	-				-0.3
4,585,216	-				+0.9
4,585,226	+				-0.9
4,585,226	+				-0.4
4,585,226	+				-0.8
4,585,226	-				-0.8
4,585,226	-				+0.4
4,585,226	-				+0.8
4,585,234	+				+0.1
4,585,234	-				+1.2
4,585,234	-				-2.1
4,585,236	+				+0.0
4,585,246	+				+0.3
4,585,246	+				-0.7
4,585,246	+				-0.3
4,585,247	+				-1.0
4,585,249	-				-0.8
4,585,252	-				-0.5
4,585,253	-				-1.9
4,585,255	-				-1.5
4,585,255	-				-0.6
4,585,255	-				+0.2
4,585,255	-				+0.1
4,585,265	-				-0.4
4,585,319	-				-0.7
4,585,324	-				-2.0
4,585,330	+				-0.5
4,585,337	+		GFF4592	0.10	+1.2
4,585,353	-		GFF4592	0.13	-2.0
4,585,358	-		GFF4592	0.13	+0.4
4,585,365	+		GFF4592	0.14	-2.3
4,585,374	+		GFF4592	0.15	+0.4
4,585,382	-		GFF4592	0.16	-0.4
4,585,382	-		GFF4592	0.16	-2.9
4,585,382	-		GFF4592	0.16	+0.5
4,585,420	+		GFF4592	0.22	-2.1
4,585,447	-		GFF4592	0.25	-1.7
4,585,465	-		GFF4592	0.28	-0.5
4,585,467	+		GFF4592	0.28	-1.9
4,585,467	+		GFF4592	0.28	+0.0
4,585,471	+		GFF4592	0.28	-0.7
4,585,498	+		GFF4592	0.32	-1.6
4,585,498	+		GFF4592	0.32	+0.1
4,585,511	+		GFF4592	0.34	-0.6
4,585,511	+		GFF4592	0.34	+0.2
4,585,511	+		GFF4592	0.34	-1.1
4,585,519	-		GFF4592	0.35	-0.6
4,585,519	-		GFF4592	0.35	-2.1
4,585,556	-		GFF4592	0.40	-0.4
4,585,581	+		GFF4592	0.43	-0.3
4,585,589	-		GFF4592	0.44	-1.0
4,585,589	-		GFF4592	0.44	+0.8
4,585,608	-		GFF4592	0.47	+0.9
4,585,616	+		GFF4592	0.48	-0.7
4,585,618	+		GFF4592	0.48	-0.5
4,585,624	+		GFF4592	0.49	-2.4
4,585,626	-		GFF4592	0.49	-2.0
4,585,630	+		GFF4592	0.50	-1.0
4,585,630	+		GFF4592	0.50	-0.1
4,585,630	+		GFF4592	0.50	+1.3
4,585,630	+		GFF4592	0.50	-1.1
4,585,631	-		GFF4592	0.50	-1.7
4,585,632	-		GFF4592	0.50	-0.7
4,585,638	-		GFF4592	0.51	+0.3
4,585,638	-		GFF4592	0.51	+0.1
4,585,638	-		GFF4592	0.51	-0.7
4,585,638	-		GFF4592	0.51	-0.7
4,585,640	+		GFF4592	0.51	-0.7
4,585,640	+		GFF4592	0.51	-0.7
4,585,640	+		GFF4592	0.51	+0.3
4,585,648	-		GFF4592	0.52	-0.8
4,585,648	-		GFF4592	0.52	-1.0
4,585,674	+		GFF4592	0.56	+0.5
4,585,682	+		GFF4592	0.57	-0.3
4,585,714	-		GFF4592	0.61	-0.3
4,585,714	-		GFF4592	0.61	+1.0
4,585,735	-		GFF4592	0.64	-0.4
4,585,737	+		GFF4592	0.64	-0.0
4,585,738	+		GFF4592	0.65	-0.0
4,585,738	+		GFF4592	0.65	-2.1
4,585,738	-		GFF4592	0.65	+0.0
4,585,743	+		GFF4592	0.65	-1.6
4,585,743	+		GFF4592	0.65	+0.9
4,585,751	-		GFF4592	0.66	-0.4
4,585,751	-		GFF4592	0.66	-1.4
4,585,751	-		GFF4592	0.66	+0.4
4,585,751	-		GFF4592	0.66	-1.5
4,585,751	-		GFF4592	0.66	-1.2
4,585,753	+		GFF4592	0.67	+0.7
4,585,763	-		GFF4592	0.68	-2.4
4,585,765	-		GFF4592	0.68	-0.4
4,585,779	+		GFF4592	0.70	-1.8
4,585,793	-		GFF4592	0.72	+0.1
4,585,807	-		GFF4592	0.74	+0.1
4,585,826	-		GFF4592	0.76	-0.7
4,585,838	+		GFF4592	0.78	+0.0
4,585,838	+		GFF4592	0.78	+0.6
4,585,838	+		GFF4592	0.78	-0.9
4,585,844	+		GFF4592	0.79	-0.0
4,585,845	+		GFF4592	0.79	-1.6
4,585,845	+		GFF4592	0.79	+1.2
4,585,847	-		GFF4592	0.79	+0.2
4,585,852	-		GFF4592	0.80	+0.6
4,585,852	-		GFF4592	0.80	-0.0
4,585,852	-		GFF4592	0.80	-0.6
4,585,852	-		GFF4592	0.80	-0.1
4,585,853	-		GFF4592	0.80	-0.0
4,585,857	+		GFF4592	0.81	-1.4
4,585,887	-		GFF4592	0.85	-0.2
4,585,889	+		GFF4592	0.85	-0.6
4,585,889	+		GFF4592	0.85	-0.4
4,585,897	-		GFF4592	0.86	-0.0
4,585,897	-		GFF4592	0.86	+0.2
4,585,927	+				-0.4
4,585,927	+				-0.5
4,585,934	+				+0.7
4,585,935	-				-2.4
4,585,935	-				+0.0
4,585,942	+				+0.5
4,585,942	-				-0.8
4,585,975	-				-2.1
4,585,980	-				-1.1
4,585,980	-				-0.9
4,586,047	+				-0.7
4,586,106	+				-1.2
4,586,106	+				-0.4
4,586,108	+				+0.9
4,586,188	-				+1.7
4,586,220	+				-2.2
4,586,228	-				-1.9
4,586,258	-				-0.1
4,586,291	-				+0.0
4,586,293	-				-1.3
4,586,295	+				+0.3
4,586,295	+				-0.6
4,586,295	+				-1.5
4,586,295	+				+0.4
4,586,295	+				+0.4
4,586,295	+				-0.4
4,586,295	+				-2.5
4,586,295	+				+0.7
4,586,295	+				-0.7
4,586,295	+				+0.8
4,586,295	+				-0.6
4,586,295	+				+0.3
4,586,295	+				-1.7
4,586,295	+				-0.1
4,586,295	+				-0.3
4,586,295	+				+0.1
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