Strain Fitness in Sphingobium sp. HT1-2 around GFF4396

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
4,396,173	+		GFF4394	0.42	+0.0
4,396,182	-		GFF4394	0.44	-0.8
4,396,200	+		GFF4394	0.46	+0.3
4,396,222	+		GFF4394	0.49	+0.7
4,396,230	-		GFF4394	0.50	+1.9
4,396,275	-		GFF4394	0.55	+0.9
4,396,305	+		GFF4394	0.59	+0.5
4,396,318	+		GFF4394	0.61	-2.2
4,396,326	-		GFF4394	0.62	+0.2
4,396,379	+		GFF4394	0.68	+0.4
4,396,380	+		GFF4394	0.68	+0.6
4,396,391	+		GFF4394	0.70	-0.2
4,396,398	-		GFF4394	0.71	+1.2
4,396,399	-		GFF4394	0.71	-1.0
4,396,415	+		GFF4394	0.73	-0.5
4,396,432	+		GFF4394	0.75	+0.3
4,396,432	+		GFF4394	0.75	+0.1
4,396,440	-		GFF4394	0.76	-0.0
4,396,446	+		GFF4394	0.77	-1.2
4,396,457	+		GFF4394	0.78	-0.1
4,396,457	+		GFF4394	0.78	+0.2
4,396,457	+		GFF4394	0.78	+1.2
4,396,457	+		GFF4394	0.78	-0.2
4,396,465	+		GFF4394	0.79	+0.2
4,396,465	+		GFF4394	0.79	+0.9
4,396,465	-		GFF4394	0.79	-0.2
4,396,473	-		GFF4394	0.80	-0.1
4,396,473	-		GFF4394	0.80	-1.6
4,396,473	-		GFF4394	0.80	+0.7
4,396,473	-		GFF4394	0.80	+0.6
4,396,474	-		GFF4394	0.80	-0.3
4,396,523	-		GFF4394	0.86	-0.1
4,396,538	-		GFF4394	0.88	-1.4
4,396,605	-				+0.7
4,396,632	-				+1.2
4,396,773	-		GFF4395	0.47	+0.7
4,396,784	+		GFF4395	0.51	-0.3
4,396,784	+		GFF4395	0.51	+0.4
4,396,794	+		GFF4395	0.55	-0.3
4,396,843	-		GFF4395	0.74	+0.2
4,396,862	+		GFF4395	0.81	+1.3
4,396,865	-		GFF4395	0.83	-0.8
4,396,865	-		GFF4395	0.83	+0.3
4,396,867	+		GFF4395	0.83	+0.0
4,396,867	+		GFF4395	0.83	+0.4
4,396,875	-		GFF4395	0.86	+0.2
4,396,877	+		GFF4395	0.87	-0.8
4,396,882	+		GFF4395	0.89	-0.6
4,396,944	+				-1.1
4,396,952	-				-0.7
4,396,952	-				+0.5
4,396,959	+				-0.2
4,396,985	+				+0.1
4,396,993	-				-0.2
4,397,002	+				-0.2
4,397,002	-				+0.5
4,397,065	-				+0.3
4,397,114	+				-1.1
4,397,121	+				-0.3
4,397,129	-				-0.7
4,397,131	+				-0.0
4,397,137	-				+0.4
4,397,163	-				-0.4
4,397,218	-		GFF4396	0.20	-0.0
4,397,226	-		GFF4396	0.22	+0.3
4,397,287	-		GFF4396	0.37	-0.2
4,397,294	-		GFF4396	0.38	+0.3
4,397,310	+		GFF4396	0.42	+0.8
4,397,310	+		GFF4396	0.42	-0.9
4,397,310	+		GFF4396	0.42	-0.3
4,397,315	+		GFF4396	0.43	-1.1
4,397,318	-		GFF4396	0.44	-0.9
4,397,318	-		GFF4396	0.44	+1.4
4,397,318	-		GFF4396	0.44	+0.3
4,397,325	+		GFF4396	0.46	+0.1
4,397,330	+		GFF4396	0.47	-0.2
4,397,333	-		GFF4396	0.48	-0.8
4,397,333	-		GFF4396	0.48	+0.3
4,397,337	+		GFF4396	0.49	-0.3
4,397,346	+		GFF4396	0.51	-0.2
4,397,354	-		GFF4396	0.53	-1.0
4,397,354	-		GFF4396	0.53	-0.6
4,397,365	+		GFF4396	0.55	+0.4
4,397,373	-		GFF4396	0.57	-0.7
4,397,387	+		GFF4396	0.60	+0.8
4,397,417	-		GFF4396	0.68	+1.4
4,397,427	+		GFF4396	0.70	-3.6
4,397,429	-		GFF4396	0.70	-0.8
4,397,444	-		GFF4396	0.74	+0.2
4,397,504	-		GFF4396	0.88	-0.0
4,397,522	+				-0.6
4,397,522	-				-0.3
4,397,530	-				-0.3
4,397,536	+				+0.2
4,397,541	+				+0.1
4,397,549	-				-0.1
4,397,573	+				+0.5
4,397,575	-				+0.3
4,397,575	-				+0.5
4,397,583	-				+0.8
4,397,583	-				-2.1
4,397,585	+				-1.0
4,397,593	-				-0.9
4,397,610	+				-1.0
4,397,620	+				-1.1
4,397,620	+				-0.0
4,397,623	-				+1.9
4,397,661	-				+0.9
4,397,699	+				-1.3
4,397,699	+				+0.9
4,397,732	-				-1.2
4,397,735	+				-0.7
4,397,735	+				-0.6
4,397,751	+				+0.0
4,397,751	+				-0.0
4,397,751	+				-0.6
4,397,751	+				-0.8
4,397,759	-				+0.6
4,397,759	-				-0.1
4,397,759	-				-0.2
4,397,759	-				+0.8
4,397,759	-				+1.3
4,397,759	-				-0.4
4,397,764	-				+0.1
4,397,766	-				+1.2
4,397,779	+				+0.0
4,397,800	-		GFF4397	0.11	+1.1
4,397,808	-		GFF4397	0.12	-0.6
4,397,809	+		GFF4397	0.12	+0.4
4,397,823	-		GFF4397	0.13	-1.1
4,397,858	+		GFF4397	0.16	-0.0
4,397,866	-		GFF4397	0.17	+0.3
4,397,881	+		GFF4397	0.18	-0.1
4,397,886	+		GFF4397	0.19	-0.6
4,397,891	+		GFF4397	0.19	-1.0
4,397,891	+		GFF4397	0.19	-0.1
4,397,899	-		GFF4397	0.20	+0.2
4,397,899	-		GFF4397	0.20	-0.7
4,397,899	-		GFF4397	0.20	+0.3
4,397,899	-		GFF4397	0.20	-0.2
4,397,899	-		GFF4397	0.20	-0.1
4,397,907	-		GFF4397	0.21	+0.2
4,397,909	+		GFF4397	0.21	+0.7
4,397,909	-		GFF4397	0.21	-0.7
4,397,917	-		GFF4397	0.22	-1.0
4,397,920	+		GFF4397	0.22	-0.4
4,397,928	-		GFF4397	0.23	+0.6
4,397,928	-		GFF4397	0.23	-1.2
4,397,928	-		GFF4397	0.23	-1.1
4,397,928	-		GFF4397	0.23	+0.6
4,397,962	+		GFF4397	0.26	-0.8
4,397,970	-		GFF4397	0.27	-0.9
4,397,970	-		GFF4397	0.27	+1.5
4,397,970	-		GFF4397	0.27	-0.2
4,397,970	-		GFF4397	0.27	-0.6
4,397,970	-		GFF4397	0.27	-1.8
4,397,970	-		GFF4397	0.27	+0.2
4,397,980	+		GFF4397	0.28	-0.6
4,397,980	+		GFF4397	0.28	-1.1
4,397,980	+		GFF4397	0.28	+1.2
4,397,980	+		GFF4397	0.28	-0.6
4,397,980	+		GFF4397	0.28	+0.3
4,397,980	+		GFF4397	0.28	-0.6
4,397,985	+		GFF4397	0.28	+0.2
4,397,985	+		GFF4397	0.28	+0.5
4,397,988	-		GFF4397	0.28	+0.2
4,397,988	-		GFF4397	0.28	-1.3
4,397,988	-		GFF4397	0.28	-0.1
4,397,988	-		GFF4397	0.28	+0.6
4,397,988	-		GFF4397	0.28	-0.1
4,397,989	+		GFF4397	0.28	-0.1
4,397,993	-		GFF4397	0.29	+1.2
4,397,993	-		GFF4397	0.29	+1.2
4,397,993	-		GFF4397	0.29	+0.8
4,397,998	-		GFF4397	0.29	+0.8
4,397,998	-		GFF4397	0.29	-0.4
4,397,998	-		GFF4397	0.29	-0.6
4,398,010	+		GFF4397	0.30	+0.4
4,398,025	+		GFF4397	0.32	-0.4
4,398,025	+		GFF4397	0.32	-0.5
4,398,033	-		GFF4397	0.33	-0.2
4,398,066	-		GFF4397	0.36	-0.3
4,398,141	+		GFF4397	0.43	+0.4
4,398,143	+		GFF4397	0.43	+0.2
4,398,165	-		GFF4397	0.45	-1.0
4,398,221	+		GFF4397	0.50	-1.4
4,398,221	+		GFF4397	0.50	-1.1
4,398,224	-		GFF4397	0.50	+0.5
4,398,226	+		GFF4397	0.51	+0.4
4,398,229	-		GFF4397	0.51	-0.8
4,398,231	+		GFF4397	0.51	-1.6
4,398,231	+		GFF4397	0.51	-0.7
4,398,239	-		GFF4397	0.52	-1.3
4,398,239	-		GFF4397	0.52	-0.6
4,398,239	-		GFF4397	0.52	-0.2
4,398,244	+		GFF4397	0.52	+1.7
4,398,247	-		GFF4397	0.53	+0.4
4,398,249	+		GFF4397	0.53	+0.2
4,398,252	-		GFF4397	0.53	+0.3
4,398,264	+		GFF4397	0.54	-0.7
4,398,264	+		GFF4397	0.54	+1.7
4,398,319	-		GFF4397	0.59	+0.4
4,398,319	-		GFF4397	0.59	-0.4
4,398,321	+		GFF4397	0.59	-0.6
4,398,329	-		GFF4397	0.60	-2.0
4,398,329	-		GFF4397	0.60	-0.4
4,398,350	-		GFF4397	0.62	-2.0
4,398,352	-		GFF4397	0.62	+1.5
4,398,360	-		GFF4397	0.63	+0.7
4,398,360	-		GFF4397	0.63	-0.2
4,398,362	+		GFF4397	0.63	-0.5
4,398,365	-		GFF4397	0.64	+0.1
4,398,370	-		GFF4397	0.64	+0.5
4,398,372	+		GFF4397	0.64	+1.7
4,398,372	+		GFF4397	0.64	+1.3
4,398,372	+		GFF4397	0.64	+0.2
4,398,380	-		GFF4397	0.65	+1.6
4,398,380	-		GFF4397	0.65	+0.2
4,398,380	-		GFF4397	0.65	-0.5
4,398,380	-		GFF4397	0.65	+0.5
4,398,390	-		GFF4397	0.66	-0.6
4,398,421	+		GFF4397	0.69	-2.4
4,398,421	+		GFF4397	0.69	-0.1
4,398,429	-		GFF4397	0.69	+2.4
4,398,434	+		GFF4397	0.70	-0.2
4,398,436	-		GFF4397	0.70	-1.6
4,398,447	-		GFF4397	0.71	+0.1
4,398,526	+		GFF4397	0.78	-0.8
4,398,535	+		GFF4397	0.79	-0.1