Strain Fitness in Sphingobium sp. HT1-2 around GFF4333

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
4,335,202	+		GFF4331	0.74	-0.7
4,335,233	+		GFF4331	0.75	-1.1
4,335,239	-		GFF4331	0.75	+1.3
4,335,247	+		GFF4331	0.76	-0.6
4,335,255	-		GFF4331	0.76	-0.1
4,335,266	+		GFF4331	0.77	+0.5
4,335,266	+		GFF4331	0.77	-1.1
4,335,266	+		GFF4331	0.77	+0.5
4,335,266	+		GFF4331	0.77	-0.7
4,335,266	+		GFF4331	0.77	+1.4
4,335,266	+		GFF4331	0.77	-2.5
4,335,266	+		GFF4331	0.77	+0.1
4,335,266	+		GFF4331	0.77	-0.1
4,335,266	+		GFF4331	0.77	+0.3
4,335,272	+		GFF4331	0.77	+0.7
4,335,274	-		GFF4331	0.77	+0.1
4,335,274	-		GFF4331	0.77	+0.2
4,335,274	-		GFF4331	0.77	-0.7
4,335,274	-		GFF4331	0.77	+0.0
4,335,274	-		GFF4331	0.77	-0.1
4,335,274	-		GFF4331	0.77	-1.8
4,335,274	-		GFF4331	0.77	-0.2
4,335,274	-		GFF4331	0.77	-0.1
4,335,274	-		GFF4331	0.77	+1.0
4,335,274	-		GFF4331	0.77	-3.2
4,335,274	-		GFF4331	0.77	-1.1
4,335,280	-		GFF4331	0.77	-0.7
4,335,285	-		GFF4331	0.78	-2.4
4,335,285	-		GFF4331	0.78	-1.1
4,335,303	-		GFF4331	0.78	-0.0
4,335,303	-		GFF4331	0.78	-1.9
4,335,314	+		GFF4331	0.79	-2.3
4,335,316	+		GFF4331	0.79	-0.1
4,335,322	-		GFF4331	0.79	-0.6
4,335,347	+		GFF4331	0.81	-0.1
4,335,349	-		GFF4331	0.81	+1.4
4,335,352	+		GFF4331	0.81	-0.4
4,335,355	-		GFF4331	0.81	+0.3
4,335,355	-		GFF4331	0.81	-0.8
4,335,357	+		GFF4331	0.81	-1.0
4,335,362	+		GFF4331	0.81	-1.7
4,335,362	+		GFF4331	0.81	-1.7
4,335,365	-		GFF4331	0.81	-2.5
4,335,375	+		GFF4331	0.82	+1.4
4,335,396	+		GFF4331	0.83	-2.0
4,335,396	+		GFF4331	0.83	-2.2
4,335,404	-		GFF4331	0.83	+0.2
4,335,406	-		GFF4331	0.83	-0.2
4,335,427	+		GFF4331	0.84	-0.7
4,335,431	+		GFF4331	0.85	-1.9
4,335,432	+		GFF4331	0.85	-2.0
4,335,449	+		GFF4331	0.85	-1.1
4,335,457	-		GFF4331	0.86	-1.7
4,335,492	+		GFF4331	0.87	-1.4
4,335,510	-		GFF4331	0.88	-2.8
4,335,510	-		GFF4331	0.88	-0.7
4,335,535	-		GFF4331	0.89	-0.8
4,335,598	+				-0.5
4,335,608	+				+0.2
4,335,649	+				-0.4
4,335,651	-				-0.1
4,335,659	+				-2.0
4,335,680	-				-1.3
4,335,716	+				-1.9
4,335,716	+				+0.3
4,335,716	+				-1.8
4,335,716	+				+1.0
4,335,716	+				-1.8
4,335,716	+				-0.7
4,335,716	+				-0.6
4,335,716	+				-0.6
4,335,716	+				-0.1
4,335,721	+				+0.7
4,335,721	+				-0.7
4,335,724	+				+0.0
4,335,724	-				-0.5
4,335,724	-				-0.9
4,335,724	-				-0.4
4,335,724	-				-0.3
4,335,724	-				-0.2
4,335,724	-				-0.3
4,335,724	-				-1.1
4,335,724	-				+1.0
4,335,724	-				+0.1
4,335,728	-				-0.6
4,335,761	+				-0.1
4,335,775	-				-0.2
4,335,775	-				+0.1
4,335,802	-		GFF4332	0.11	-0.4
4,335,804	+		GFF4332	0.11	+0.9
4,335,804	+		GFF4332	0.11	+1.3
4,335,811	-		GFF4332	0.13	-1.4
4,335,842	+		GFF4332	0.20	-0.2
4,335,860	+		GFF4332	0.24	-1.2
4,335,861	-		GFF4332	0.24	-0.7
4,335,867	-		GFF4332	0.25	-0.0
4,335,867	-		GFF4332	0.25	+0.5
4,335,867	-		GFF4332	0.25	-2.1
4,335,867	-		GFF4332	0.25	-2.5
4,335,867	-		GFF4332	0.25	+1.3
4,335,869	+		GFF4332	0.26	+0.3
4,335,872	+		GFF4332	0.27	+0.1
4,335,880	+		GFF4332	0.28	+0.4
4,335,880	+		GFF4332	0.28	+0.4
4,335,891	+		GFF4332	0.31	-1.2
4,335,900	-		GFF4332	0.33	+0.5
4,335,918	+		GFF4332	0.37	-0.7
4,335,918	+		GFF4332	0.37	-1.4
4,335,923	+		GFF4332	0.38	-0.8
4,335,926	-		GFF4332	0.39	-1.1
4,335,931	-		GFF4332	0.40	+0.9
4,335,953	+		GFF4332	0.45	+0.8
4,335,953	+		GFF4332	0.45	+0.2
4,335,953	+		GFF4332	0.45	-0.4
4,335,953	+		GFF4332	0.45	+0.3
4,335,953	+		GFF4332	0.45	+0.4
4,335,953	+		GFF4332	0.45	-1.4
4,335,956	-		GFF4332	0.45	+0.6
4,335,961	-		GFF4332	0.47	-0.9
4,335,961	-		GFF4332	0.47	+0.1
4,335,971	-		GFF4332	0.49	-0.3
4,335,980	-		GFF4332	0.51	-0.3
4,335,987	-		GFF4332	0.52	+0.6
4,336,011	-		GFF4332	0.58	-0.6
4,336,015	-		GFF4332	0.59	-0.5
4,336,015	-		GFF4332	0.59	-0.8
4,336,033	-		GFF4332	0.63	+0.5
4,336,043	+		GFF4332	0.65	+0.2
4,336,087	-		GFF4332	0.75	+0.9
4,336,087	-		GFF4332	0.75	+0.1
4,336,087	-		GFF4332	0.75	-0.6
4,336,094	-		GFF4332	0.77	+0.3
4,336,101	-		GFF4332	0.78	+0.4
4,336,112	+		GFF4332	0.81	-0.2
4,336,114	-		GFF4332	0.81	-0.8
4,336,120	-		GFF4332	0.82	-1.7
4,336,138	-		GFF4332	0.86	-1.2
4,336,138	-		GFF4332	0.86	-0.1
4,336,152	-		GFF4332	0.90	-1.4
4,336,159	+				+0.1
4,336,204	+				-0.6
4,336,206	+				-0.1
4,336,206	+				+0.2
4,336,214	-				-0.7
4,336,221	-				+0.2
4,336,221	-				+0.3
4,336,223	-				-0.5
4,336,225	-				-0.6
4,336,244	+				-0.4
4,336,283	-				-0.7
4,336,287	+				+0.1
4,336,293	+				+1.6
4,336,295	-				-0.3
4,336,297	-				-1.5
4,336,301	-				+0.7
4,336,309	+				-0.2
4,336,309	+				-0.0
4,336,309	+				-1.8
4,336,309	+				+0.4
4,336,309	+				+1.1
4,336,309	+				-0.1
4,336,309	+				-2.4
4,336,309	+				+0.4
4,336,317	-				-0.8
4,336,317	-				-1.5
4,336,317	-				+0.8
4,336,317	-				-0.3
4,336,317	-				+0.3
4,336,324	+				-0.7
4,336,324	-				+0.0
4,336,334	+				-0.2
4,336,334	+				+1.5
4,336,334	+				-2.8
4,336,334	+				-0.1
4,336,334	+				-0.9
4,336,334	+				-2.3
4,336,337	-				-1.0
4,336,342	-				+0.1
4,336,342	-				+0.2
4,336,342	-				+1.2
4,336,342	-				+0.5
4,336,342	-				+0.0
4,336,342	-				+0.7
4,336,342	-				-0.9
4,336,342	-				-0.0
4,336,342	-				-2.0
4,336,353	+		GFF4333	0.10	+0.0
4,336,367	-		GFF4333	0.11	+0.9
4,336,369	+		GFF4333	0.11	+0.6
4,336,390	-		GFF4333	0.13	+1.6
4,336,390	-		GFF4333	0.13	+0.9
4,336,393	+		GFF4333	0.13	-1.8
4,336,393	+		GFF4333	0.13	+0.0
4,336,393	+		GFF4333	0.13	-1.8
4,336,393	+		GFF4333	0.13	-1.4
4,336,393	+		GFF4333	0.13	+0.9
4,336,393	+		GFF4333	0.13	-1.8
4,336,393	+		GFF4333	0.13	-0.5
4,336,393	+		GFF4333	0.13	-0.2
4,336,393	+		GFF4333	0.13	-1.7
4,336,393	+		GFF4333	0.13	+1.1
4,336,393	+		GFF4333	0.13	-0.2
4,336,393	+		GFF4333	0.13	+0.2
4,336,398	+		GFF4333	0.13	+0.2
4,336,401	-		GFF4333	0.13	-2.4
4,336,401	-		GFF4333	0.13	+0.2
4,336,401	-		GFF4333	0.13	+1.0
4,336,401	-		GFF4333	0.13	+0.6
4,336,401	-		GFF4333	0.13	-0.5
4,336,401	-		GFF4333	0.13	-1.0
4,336,401	-		GFF4333	0.13	+0.4
4,336,401	-		GFF4333	0.13	-1.4
4,336,401	-		GFF4333	0.13	+0.3
4,336,401	-		GFF4333	0.13	+0.1
4,336,401	-		GFF4333	0.13	-1.2
4,336,406	-		GFF4333	0.14	-0.3
4,336,451	+		GFF4333	0.17	-0.3
4,336,459	-		GFF4333	0.17	+0.5
4,336,459	-		GFF4333	0.17	+0.2
4,336,459	-		GFF4333	0.17	+0.7
4,336,466	+		GFF4333	0.18	+0.5
4,336,466	+		GFF4333	0.18	+0.0
4,336,466	+		GFF4333	0.18	-0.9
4,336,466	+		GFF4333	0.18	+0.3
4,336,466	+		GFF4333	0.18	-1.4
4,336,473	+		GFF4333	0.18	-0.1
4,336,474	+		GFF4333	0.18	+1.1
4,336,474	-		GFF4333	0.18	+0.1
4,336,474	-		GFF4333	0.18	-0.1
4,336,474	-		GFF4333	0.18	+1.3
4,336,481	-		GFF4333	0.19	-2.3
4,336,481	-		GFF4333	0.19	+0.6
4,336,481	-		GFF4333	0.19	-0.6
4,336,482	+		GFF4333	0.19	+0.1
4,336,495	-		GFF4333	0.20	+0.7
4,336,497	+		GFF4333	0.20	-1.8
4,336,500	-		GFF4333	0.20	+0.7
4,336,505	+		GFF4333	0.20	+0.1
4,336,510	+		GFF4333	0.20	+0.6
4,336,513	-		GFF4333	0.21	+0.2
4,336,513	-		GFF4333	0.21	-0.3
4,336,513	-		GFF4333	0.21	-0.0
4,336,513	-		GFF4333	0.21	+0.1
4,336,519	+		GFF4333	0.21	-0.9
4,336,519	+		GFF4333	0.21	+0.7
4,336,519	+		GFF4333	0.21	+0.0
4,336,519	+		GFF4333	0.21	+0.1
4,336,519	+		GFF4333	0.21	-1.8
4,336,527	-		GFF4333	0.22	-0.0
4,336,527	-		GFF4333	0.22	-0.3
4,336,527	-		GFF4333	0.22	-2.0
4,336,534	+		GFF4333	0.22	+0.0
4,336,537	-		GFF4333	0.22	+1.2
4,336,586	+		GFF4333	0.25	-0.1
4,336,597	+		GFF4333	0.26	-0.8
4,336,607	+		GFF4333	0.27	-0.1
4,336,609	+		GFF4333	0.27	+0.3
4,336,611	+		GFF4333	0.27	+0.2
4,336,615	-		GFF4333	0.27	-0.4
4,336,630	+		GFF4333	0.28	-0.2
4,336,638	-		GFF4333	0.29	+0.7
4,336,680	-		GFF4333	0.32	-0.4
4,336,682	+		GFF4333	0.32	-2.3
4,336,702	-		GFF4333	0.33	-0.0
4,336,710	-		GFF4333	0.33	+0.5
4,336,720	+		GFF4333	0.34	-0.7
4,336,743	+		GFF4333	0.36	-2.1
4,336,795	+		GFF4333	0.39	-1.3
4,336,796	-		GFF4333	0.39	+0.8
4,336,803	-		GFF4333	0.39	+0.2
4,336,814	-		GFF4333	0.40	-0.1
4,336,824	-		GFF4333	0.41	+0.6
4,336,826	+		GFF4333	0.41	-0.7
4,336,826	+		GFF4333	0.41	+1.6
4,336,826	+		GFF4333	0.41	-2.0
4,336,826	+		GFF4333	0.41	+0.3
4,336,826	+		GFF4333	0.41	-0.0
4,336,834	-		GFF4333	0.42	-0.5
4,336,836	-		GFF4333	0.42	-0.5
4,336,839	+		GFF4333	0.42	-1.1
4,336,839	-		GFF4333	0.42	+0.8
4,336,862	-		GFF4333	0.43	+1.4
4,336,883	+		GFF4333	0.45	-2.1
4,336,890	+		GFF4333	0.45	+0.5
4,336,898	+		GFF4333	0.46	+0.3
4,336,914	+		GFF4333	0.47	-0.3
4,336,916	-		GFF4333	0.47	+1.0
4,336,920	-		GFF4333	0.47	-0.4
4,336,920	-		GFF4333	0.47	+0.2
4,336,922	-		GFF4333	0.47	-1.0
4,336,922	-		GFF4333	0.47	-0.0
4,336,925	-		GFF4333	0.47	+0.1
4,336,933	-		GFF4333	0.48	-0.1
4,336,956	-		GFF4333	0.49	-0.4
4,336,956	-		GFF4333	0.49	-0.4
4,336,958	+		GFF4333	0.50	-0.2
4,336,958	-		GFF4333	0.50	+0.3
4,336,972	+		GFF4333	0.50	+0.1
4,336,987	+		GFF4333	0.51	+0.4
4,336,995	-		GFF4333	0.52	+0.2
4,336,995	-		GFF4333	0.52	-0.7
4,336,995	-		GFF4333	0.52	-2.1
4,337,030	+		GFF4333	0.54	-0.0
4,337,058	-		GFF4333	0.56	-0.4
4,337,058	-		GFF4333	0.56	+0.0
4,337,068	+		GFF4333	0.57	-0.5
4,337,076	-		GFF4333	0.57	-0.8
4,337,080	+		GFF4333	0.57	-0.3
4,337,080	+		GFF4333	0.57	-1.8
4,337,080	+		GFF4333	0.57	-0.5
4,337,088	-		GFF4333	0.58	+0.3
4,337,088	-		GFF4333	0.58	-0.2
4,337,088	-		GFF4333	0.58	-0.4
4,337,088	-		GFF4333	0.58	-1.2
4,337,119	-		GFF4333	0.60	-0.5
4,337,125	+		GFF4333	0.60	-0.1
4,337,126	-		GFF4333	0.60	-0.4
4,337,133	-		GFF4333	0.61	+1.8
4,337,133	-		GFF4333	0.61	+0.4
4,337,143	-		GFF4333	0.62	-0.8
4,337,151	+		GFF4333	0.62	-0.9
4,337,151	+		GFF4333	0.62	+0.5
4,337,161	+		GFF4333	0.63	+0.3
4,337,178	+		GFF4333	0.64	+0.2
4,337,209	+		GFF4333	0.66	+0.1
4,337,211	+		GFF4333	0.66	-0.6
4,337,217	+		GFF4333	0.66	-0.3
4,337,217	+		GFF4333	0.66	-1.1
4,337,219	-		GFF4333	0.66	+0.5
4,337,219	-		GFF4333	0.66	+0.3
4,337,226	-		GFF4333	0.67	-1.3
4,337,250	-		GFF4333	0.68	+1.1
4,337,293	+		GFF4333	0.71	+0.3
4,337,305	+		GFF4333	0.72	+1.3
4,337,305	+		GFF4333	0.72	+1.2
4,337,313	-		GFF4333	0.73	-1.2
4,337,327	-		GFF4333	0.73	-1.4
4,337,327	-		GFF4333	0.73	-1.0
4,337,345	-		GFF4333	0.75	+0.7
4,337,367	-		GFF4333	0.76	+0.3
4,337,367	-		GFF4333	0.76	+0.2
4,337,373	+		GFF4333	0.76	+1.5
4,337,373	+		GFF4333	0.76	+0.9
4,337,373	+		GFF4333	0.76	+0.9
4,337,373	+		GFF4333	0.76	-1.0
4,337,374	+		GFF4333	0.77	-0.6
4,337,374	+		GFF4333	0.77	+0.0
4,337,374	+		GFF4333	0.77	+0.5
4,337,374	+		GFF4333	0.77	-0.1
4,337,374	+		GFF4333	0.77	-0.2
4,337,374	+		GFF4333	0.77	-1.7
4,337,374	+		GFF4333	0.77	+0.1
4,337,374	+		GFF4333	0.77	+0.3
4,337,381	-		GFF4333	0.77	-0.7
4,337,382	-		GFF4333	0.77	+0.1
4,337,382	-		GFF4333	0.77	+1.4
4,337,382	-		GFF4333	0.77	+1.4
4,337,382	-		GFF4333	0.77	-0.4
4,337,394	+		GFF4333	0.78	-1.0
4,337,398	+		GFF4333	0.78	-0.3
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4,337,402	-		GFF4333	0.78	+0.1
4,337,436	+		GFF4333	0.81	-1.8
4,337,449	-		GFF4333	0.81	+0.3
4,337,455	+		GFF4333	0.82	+0.2
4,337,455	+		GFF4333	0.82	+0.1
4,337,463	-		GFF4333	0.82	-0.2
4,337,473	+		GFF4333	0.83	+0.8
4,337,473	+		GFF4333	0.83	+0.7
4,337,473	-		GFF4333	0.83	-1.8
4,337,476	+		GFF4333	0.83	-1.1
4,337,484	-		GFF4333	0.84	-0.3
4,337,491	+		GFF4333	0.84	-2.0
4,337,492	+		GFF4333	0.84	-1.4
4,337,511	+		GFF4333	0.85	-1.9
4,337,513	+		GFF4333	0.86	+0.6
4,337,520	-		GFF4333	0.86	+0.6
4,337,526	+		GFF4333	0.86	-0.0
4,337,552	+		GFF4333	0.88	-1.4
4,337,557	+		GFF4333	0.88	+1.5
4,337,557	+		GFF4333	0.88	+0.5
4,337,557	+		GFF4333	0.88	-0.8
4,337,558	+		GFF4333	0.88	-0.5
4,337,560	-		GFF4333	0.89	-2.6
4,337,565	-		GFF4333	0.89	+0.9
4,337,565	-		GFF4333	0.89	-0.5
4,337,596	+				+0.4
4,337,599	-				-0.3
4,337,604	-				+0.4
4,337,608	+				-0.8
4,337,620	+				-0.2
4,337,620	+				+1.6
4,337,620	+				+0.2
4,337,621	-				-0.1
4,337,628	-				-0.8
4,337,628	-				-0.4
4,337,628	-				+0.3
4,337,675	-				+0.3
4,337,702	+				-1.1
4,337,702	+				+0.2
4,337,702	+				-0.4
4,337,702	+				-0.1
4,337,702	+				+0.4
4,337,707	-				-0.2
4,337,710	-				-1.7
4,337,710	-				+0.3
4,337,710	-				-1.3
4,337,710	-				+0.5
4,337,712	+				-0.1
4,337,712	+				-0.3
4,337,720	-				-2.3
4,337,725	+				+0.3
4,337,725	+				-0.4
4,337,725	+				-1.0
4,337,732	+				+0.6
4,337,732	+				+1.1
4,337,733	-				-2.0
4,337,733	-				+0.5
4,337,733	-				+1.7
4,337,737	+				-1.1
4,337,740	-				+0.9
4,337,745	-				+0.8
4,337,781	+				+0.7
4,337,789	-				-0.5
4,337,814	-				-0.6
4,337,823	+		GFF4334	0.11	-1.9
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4,337,920	-		GFF4334	0.21	-2.3
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4,337,972	+		GFF4334	0.26	-2.0
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4,337,999	+		GFF4334	0.29	+1.0
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4,337,999	+		GFF4334	0.29	+0.7
4,337,999	+		GFF4334	0.29	-1.8
4,337,999	+		GFF4334	0.29	-0.5
4,337,999	+		GFF4334	0.29	-0.4
4,337,999	+		GFF4334	0.29	+0.5
4,337,999	+		GFF4334	0.29	+1.0
4,337,999	+		GFF4334	0.29	-1.8
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4,338,006	-		GFF4334	0.30	-2.1
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4,338,007	-		GFF4334	0.30	+0.0
4,338,007	-		GFF4334	0.30	+0.3
4,338,007	-		GFF4334	0.30	-0.4
4,338,007	-		GFF4334	0.30	-0.7
4,338,007	-		GFF4334	0.30	-0.6
4,338,007	-		GFF4334	0.30	+0.1
4,338,007	-		GFF4334	0.30	-1.9
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4,338,014	+		GFF4334	0.31	-2.9
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4,338,014	+		GFF4334	0.31	-1.9
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4,338,022	-		GFF4334	0.31	+0.1
4,338,022	-		GFF4334	0.31	+0.1
4,338,022	-		GFF4334	0.31	-0.8
4,338,022	-		GFF4334	0.31	+0.7
4,338,022	-		GFF4334	0.31	-3.1
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4,338,022	-		GFF4334	0.31	-0.6
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4,338,038	+		GFF4334	0.33	-2.5
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4,338,116	+		GFF4334	0.41	+1.1
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4,338,124	-		GFF4334	0.42	-1.3
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4,338,124	-		GFF4334	0.42	-1.1
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4,338,253	-		GFF4334	0.55	-1.3
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4,338,334	-		GFF4334	0.64	-1.7
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4,338,592	+				-0.5
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4,338,594	+				+0.6
4,338,599	+				+0.4
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4,338,612	-				-0.3
4,338,612	-				-1.9
4,338,617	+				+0.6
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4,338,629	-				+0.3
4,338,658	-				-1.5
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4,338,689	+				+0.4
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