Strain Fitness in Sphingobium sp. HT1-2 around GFF2761

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
2,791,819	-		GFF2760	0.69	-0.6
2,791,819	-		GFF2760	0.69	-0.8
2,791,821	+		GFF2760	0.69	-1.1
2,791,829	-		GFF2760	0.70	-0.3
2,791,831	+		GFF2760	0.70	-1.4
2,791,831	+		GFF2760	0.70	+0.3
2,791,831	+		GFF2760	0.70	+0.7
2,791,832	+		GFF2760	0.70	+0.2
2,791,839	-		GFF2760	0.70	+0.1
2,791,839	-		GFF2760	0.70	-0.4
2,791,839	-		GFF2760	0.70	-0.0
2,791,840	-		GFF2760	0.70	+1.2
2,791,842	-		GFF2760	0.70	+1.0
2,791,898	-		GFF2760	0.72	-0.2
2,791,922	-		GFF2760	0.73	-0.1
2,791,929	-		GFF2760	0.73	+0.2
2,791,963	+		GFF2760	0.75	-0.1
2,791,986	+		GFF2760	0.76	+0.3
2,791,986	+		GFF2760	0.76	-0.3
2,791,986	+		GFF2760	0.76	-1.6
2,791,986	+		GFF2760	0.76	-0.6
2,791,986	+		GFF2760	0.76	+0.2
2,791,993	-		GFF2760	0.76	-0.0
2,791,994	-		GFF2760	0.76	-0.5
2,791,994	-		GFF2760	0.76	+0.3
2,792,014	+		GFF2760	0.77	+0.4
2,792,020	+		GFF2760	0.77	-1.7
2,792,021	-		GFF2760	0.77	-2.7
2,792,031	+		GFF2760	0.77	-0.2
2,792,077	+		GFF2760	0.79	-0.9
2,792,082	+		GFF2760	0.79	-1.4
2,792,085	-		GFF2760	0.79	-1.4
2,792,085	-		GFF2760	0.79	+0.1
2,792,085	-		GFF2760	0.79	-1.2
2,792,085	-		GFF2760	0.79	+0.3
2,792,090	-		GFF2760	0.79	+1.1
2,792,090	-		GFF2760	0.79	-0.9
2,792,097	+		GFF2760	0.80	-0.1
2,792,105	+		GFF2760	0.80	-0.4
2,792,110	+		GFF2760	0.80	-2.2
2,792,113	-		GFF2760	0.80	-0.9
2,792,113	-		GFF2760	0.80	+0.4
2,792,113	-		GFF2760	0.80	-0.7
2,792,125	+		GFF2760	0.81	+0.2
2,792,131	-		GFF2760	0.81	-0.8
2,792,131	-		GFF2760	0.81	+0.5
2,792,142	-		GFF2760	0.81	-1.0
2,792,142	-		GFF2760	0.81	-0.7
2,792,144	+		GFF2760	0.81	-0.7
2,792,148	+		GFF2760	0.82	+1.8
2,792,148	+		GFF2760	0.82	-0.3
2,792,148	+		GFF2760	0.82	-1.0
2,792,148	+		GFF2760	0.82	+1.0
2,792,148	+		GFF2760	0.82	-0.5
2,792,148	+		GFF2760	0.82	-1.1
2,792,148	+		GFF2760	0.82	+0.4
2,792,148	+		GFF2760	0.82	+0.2
2,792,152	-		GFF2760	0.82	-0.9
2,792,152	-		GFF2760	0.82	-0.1
2,792,152	-		GFF2760	0.82	-1.6
2,792,156	-		GFF2760	0.82	+0.1
2,792,156	-		GFF2760	0.82	-1.0
2,792,156	-		GFF2760	0.82	-0.4
2,792,156	-		GFF2760	0.82	+0.2
2,792,156	-		GFF2760	0.82	-0.2
2,792,156	-		GFF2760	0.82	-1.6
2,792,156	-		GFF2760	0.82	-0.1
2,792,156	-		GFF2760	0.82	-0.8
2,792,156	-		GFF2760	0.82	-0.8
2,792,164	+		GFF2760	0.82	+0.4
2,792,170	-		GFF2760	0.82	+0.9
2,792,172	-		GFF2760	0.82	+0.5
2,792,194	+		GFF2760	0.83	+0.3
2,792,196	+		GFF2760	0.83	-0.3
2,792,196	+		GFF2760	0.83	-0.4
2,792,196	+		GFF2760	0.83	+0.3
2,792,196	+		GFF2760	0.83	-0.2
2,792,202	-		GFF2760	0.84	+0.1
2,792,202	-		GFF2760	0.84	+0.7
2,792,204	-		GFF2760	0.84	-1.3
2,792,204	-		GFF2760	0.84	-1.6
2,792,204	-		GFF2760	0.84	-0.7
2,792,210	-		GFF2760	0.84	-2.6
2,792,226	-		GFF2760	0.84	+0.3
2,792,253	-		GFF2760	0.85	-0.9
2,792,273	-		GFF2760	0.86	-0.1
2,792,279	+		GFF2760	0.86	-1.5
2,792,279	+		GFF2760	0.86	-0.2
2,792,279	+		GFF2760	0.86	-0.1
2,792,282	-		GFF2760	0.87	-0.9
2,792,284	+		GFF2760	0.87	-0.4
2,792,287	-		GFF2760	0.87	+0.4
2,792,287	-		GFF2760	0.87	-1.8
2,792,294	+		GFF2760	0.87	+0.9
2,792,294	+		GFF2760	0.87	+0.4
2,792,302	-		GFF2760	0.87	+0.3
2,792,302	-		GFF2760	0.87	-1.8
2,792,302	-		GFF2760	0.87	-0.0
2,792,316	+		GFF2760	0.88	-1.0
2,792,324	-		GFF2760	0.88	-0.9
2,792,338	-		GFF2760	0.89	-2.1
2,792,361	-		GFF2760	0.89	+0.9
2,792,364	+		GFF2760	0.90	-1.1
2,792,364	+		GFF2760	0.90	+1.2
2,792,364	+		GFF2760	0.90	-0.4
2,792,372	-		GFF2760	0.90	-0.4
2,792,395	-				+0.5
2,792,460	-				-0.2
2,792,467	+				-0.3
2,792,472	-				-0.4
2,792,487	+				+0.7
2,792,502	-				+1.4
2,792,506	+				-0.5
2,792,506	+				-0.3
2,792,520	+				-0.1
2,792,520	+				+0.3
2,792,520	+				-0.1
2,792,528	-				-2.1
2,792,528	-				-1.1
2,792,528	-				-0.7
2,792,528	-				+0.8
2,792,528	-				-0.3
2,792,528	-				-1.7
2,792,557	-				+1.2
2,792,567	+				-1.1
2,792,577	+				-0.6
2,792,585	-				+0.3
2,792,593	+				+1.2
2,792,593	+				-0.7
2,792,602	+				-1.6
2,792,625	+				-0.1
2,792,625	+				-1.0
2,792,625	+				-1.4
2,792,625	+				-1.6
2,792,633	-				+0.4
2,792,633	-				+0.1
2,792,646	-				-0.2
2,792,673	+				+0.2
2,792,674	+				+0.6
2,792,674	+				+0.0
2,792,674	+				-0.2
2,792,674	+				-1.4
2,792,674	+				-2.2
2,792,674	+				+0.6
2,792,674	+				-0.5
2,792,674	+				-0.3
2,792,674	+				-1.1
2,792,674	+				-0.2
2,792,674	+				-0.5
2,792,674	+				-0.1
2,792,675	-				-0.2
2,792,676	-				+1.1
2,792,682	-				-1.1
2,792,682	-				-0.1
2,792,682	-				-0.4
2,792,682	-				+0.1
2,792,682	-				+1.2
2,792,682	-				+0.4
2,792,682	-				-0.2
2,792,682	-				-0.0
2,792,682	-				-0.2
2,792,682	-				-0.2
2,792,682	-				-2.6
2,792,682	-				-0.6
2,792,682	-				-0.4
2,792,682	-				+0.4
2,792,682	-				-1.6
2,792,688	-				-0.1
2,792,688	-				-0.3
2,792,716	-				-1.7
2,792,745	-				-0.7
2,792,745	-				-2.4
2,792,753	+				-0.6
2,792,758	+				+0.4
2,792,763	+				-1.6
2,792,766	-				+0.1
2,792,775	-				+0.0
2,792,782	+				-0.0
2,792,787	+				+0.8
2,792,790	-				+1.4
2,792,790	-				-0.1
2,792,810	+				+0.3
2,792,810	+				-1.0
2,792,818	-				+0.4
2,792,847	-				-0.3
2,792,867	-				-0.4
2,792,877	+				-0.0
2,792,885	+				-2.4
2,792,885	+				-0.7
2,792,885	-				+1.3
2,792,886	+				-0.6
2,792,886	+				-0.4
2,792,886	+				-0.7
2,792,886	-				+1.9
2,792,891	+				-0.7
2,792,918	+		GFF2761	0.13	-0.4
2,792,920	+		GFF2761	0.13	-0.5
2,792,979	-		GFF2761	0.19	-1.1
2,792,986	-		GFF2761	0.20	-2.1
2,792,990	-		GFF2761	0.21	+0.2
2,792,997	-		GFF2761	0.21	-1.0
2,793,002	+		GFF2761	0.22	+0.9
2,793,018	+		GFF2761	0.24	+0.3
2,793,018	+		GFF2761	0.24	-0.6
2,793,025	+		GFF2761	0.25	-1.6
2,793,025	+		GFF2761	0.25	-1.1
2,793,026	-		GFF2761	0.25	+0.3
2,793,033	-		GFF2761	0.25	-2.8
2,793,033	-		GFF2761	0.25	-0.5
2,793,033	-		GFF2761	0.25	+0.4
2,793,042	-		GFF2761	0.26	-1.6
2,793,047	-		GFF2761	0.27	+1.0
2,793,067	-		GFF2761	0.29	+0.3
2,793,068	-		GFF2761	0.29	-0.3
2,793,068	-		GFF2761	0.29	-0.9
2,793,068	-		GFF2761	0.29	+0.9
2,793,068	-		GFF2761	0.29	+0.9
2,793,072	+		GFF2761	0.30	+0.1
2,793,072	+		GFF2761	0.30	-0.7
2,793,072	+		GFF2761	0.30	-1.1
2,793,072	+		GFF2761	0.30	-1.0
2,793,072	+		GFF2761	0.30	-1.7
2,793,072	+		GFF2761	0.30	-1.0
2,793,080	-		GFF2761	0.31	-0.4
2,793,080	-		GFF2761	0.31	-1.4
2,793,080	-		GFF2761	0.31	-0.7
2,793,099	+		GFF2761	0.33	+0.3
2,793,131	-		GFF2761	0.36	-1.2
2,793,131	-		GFF2761	0.36	-1.1
2,793,146	+		GFF2761	0.38	+0.8
2,793,158	-		GFF2761	0.39	-1.7
2,793,164	+		GFF2761	0.40	+0.5
2,793,238	-		GFF2761	0.48	-1.7
2,793,248	-		GFF2761	0.49	+0.2
2,793,254	-		GFF2761	0.50	-0.3
2,793,263	+		GFF2761	0.51	+0.3
2,793,268	+		GFF2761	0.51	-0.6
2,793,268	+		GFF2761	0.51	-0.8
2,793,268	+		GFF2761	0.51	-0.4
2,793,271	-		GFF2761	0.52	-0.1
2,793,273	+		GFF2761	0.52	+0.7
2,793,276	-		GFF2761	0.52	-1.1
2,793,276	-		GFF2761	0.52	+0.2
2,793,277	+		GFF2761	0.52	-2.4
2,793,282	+		GFF2761	0.53	+1.2
2,793,290	-		GFF2761	0.54	+0.6
2,793,300	+		GFF2761	0.55	-1.4
2,793,300	+		GFF2761	0.55	+1.1
2,793,300	+		GFF2761	0.55	-3.3
2,793,300	+		GFF2761	0.55	+0.2
2,793,300	+		GFF2761	0.55	+0.4
2,793,300	+		GFF2761	0.55	-1.1
2,793,303	-		GFF2761	0.55	-0.0
2,793,305	+		GFF2761	0.55	-1.8
2,793,308	-		GFF2761	0.56	-0.4
2,793,308	-		GFF2761	0.56	-1.7
2,793,308	-		GFF2761	0.56	-0.2
2,793,308	-		GFF2761	0.56	+0.2
2,793,308	-		GFF2761	0.56	+0.4
2,793,308	-		GFF2761	0.56	+0.0
2,793,311	+		GFF2761	0.56	-0.1
2,793,312	+		GFF2761	0.56	-0.1
2,793,317	+		GFF2761	0.57	+0.1
2,793,318	-		GFF2761	0.57	-0.8
2,793,318	-		GFF2761	0.57	-0.8
2,793,320	-		GFF2761	0.57	-0.4
2,793,338	-		GFF2761	0.59	-0.9
2,793,368	+		GFF2761	0.62	-0.6
2,793,375	+		GFF2761	0.63	+0.6
2,793,376	+		GFF2761	0.63	-0.3
2,793,376	+		GFF2761	0.63	-2.0
2,793,376	+		GFF2761	0.63	+0.3
2,793,383	-		GFF2761	0.64	+0.2
2,793,383	-		GFF2761	0.64	-0.1
2,793,384	-		GFF2761	0.64	-0.8
2,793,400	+		GFF2761	0.66	-0.1
2,793,400	+		GFF2761	0.66	-1.4
2,793,400	+		GFF2761	0.66	+0.1
2,793,400	+		GFF2761	0.66	+0.3
2,793,406	+		GFF2761	0.67	-0.6
2,793,406	+		GFF2761	0.67	-0.6
2,793,408	-		GFF2761	0.67	-0.8
2,793,414	-		GFF2761	0.67	-2.0
2,793,419	-		GFF2761	0.68	-0.3
2,793,522	+		GFF2761	0.79	+1.6
2,793,522	+		GFF2761	0.79	+0.5
2,793,530	-		GFF2761	0.80	-0.1
2,793,541	+		GFF2761	0.81	-0.7
2,793,541	+		GFF2761	0.81	+0.0
2,793,547	+		GFF2761	0.82	-1.0
2,793,549	-		GFF2761	0.82	-0.9
2,793,549	-		GFF2761	0.82	-0.5
2,793,552	+		GFF2761	0.83	-0.9
2,793,560	-		GFF2761	0.84	-0.2
2,793,560	-		GFF2761	0.84	-1.2
2,793,595	+		GFF2761	0.87	-1.1
2,793,595	-		GFF2761	0.87	+0.2
2,793,603	-		GFF2761	0.88	-1.6
2,793,605	+		GFF2761	0.89	-1.3
2,793,608	-		GFF2761	0.89	+0.3
2,793,609	-		GFF2761	0.89	-0.6
2,793,659	+				+0.2
2,793,676	+				-1.3
2,793,737	-				-0.7
2,793,748	-				-0.2
2,793,761	+				+0.6
2,793,765	+				+0.9
2,793,765	+				+0.7
2,793,767	+				+0.3
2,793,774	-				-1.1
2,793,785	-				+0.8
2,793,809	+				-1.1
2,793,811	+				-1.1
2,793,817	-				-0.4
2,793,817	-				-2.0
2,793,821	+				-1.0
2,793,821	-				-1.4
2,793,821	-				+1.4
2,793,829	-				-0.4
2,793,839	+				+0.0
2,793,848	-				-1.9
2,793,903	+				-1.4
2,793,911	-				+1.1
2,793,911	-				-0.8
2,793,916	+				+0.8
2,793,916	+				-0.5
2,793,930	-				-0.4
2,793,931	+				-1.7
2,793,931	-				-0.7
2,793,935	+				-0.8
2,793,935	+				-0.1
2,793,943	-				-0.6
2,793,945	+				+0.9
2,793,945	+				+0.7
2,793,946	+				-0.8
2,793,946	+				-0.8
2,793,946	+				+0.5
2,793,946	+				+0.3
2,793,954	-				+0.3
2,793,954	-				-0.0
2,793,954	-				-0.6
2,793,954	-				+0.6
2,793,954	-				+0.6
2,793,954	-				-1.8
2,793,954	-				-0.7
2,793,954	-				+0.0
2,793,954	-				-0.2
2,793,954	-				-1.9
2,793,954	-				+0.5
2,793,954	-				-0.5
2,793,992	-				+0.7
2,794,015	-		GFF2762	0.11	+0.9
2,794,021	+		GFF2762	0.12	+0.8
2,794,024	-		GFF2762	0.12	-1.2
2,794,025	-		GFF2762	0.12	+0.3
2,794,027	+		GFF2762	0.12	-0.1
2,794,027	+		GFF2762	0.12	+0.3
2,794,035	-		GFF2762	0.13	-0.4
2,794,035	-		GFF2762	0.13	-0.6
2,794,035	-		GFF2762	0.13	+0.4
2,794,035	-		GFF2762	0.13	+1.4
2,794,038	+		GFF2762	0.13	+0.7
2,794,038	+		GFF2762	0.13	-2.3
2,794,038	+		GFF2762	0.13	-2.0
2,794,038	+		GFF2762	0.13	-0.3
2,794,038	+		GFF2762	0.13	-2.3
2,794,038	+		GFF2762	0.13	-1.4
2,794,038	+		GFF2762	0.13	+0.4
2,794,046	-		GFF2762	0.14	-0.5
2,794,046	-		GFF2762	0.14	-0.0
2,794,046	-		GFF2762	0.14	-0.9
2,794,046	-		GFF2762	0.14	-0.9
2,794,053	-		GFF2762	0.14	-1.2
2,794,063	+		GFF2762	0.15	-0.3
2,794,064	-		GFF2762	0.15	-2.1
2,794,086	-		GFF2762	0.17	-0.8
2,794,088	+		GFF2762	0.17	+0.1
2,794,090	+		GFF2762	0.17	+0.0
2,794,090	+		GFF2762	0.17	+1.1
2,794,090	+		GFF2762	0.17	+0.1
2,794,090	+		GFF2762	0.17	-0.3
2,794,090	+		GFF2762	0.17	-0.5
2,794,090	+		GFF2762	0.17	+0.1
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