Strain Fitness in Sphingobium sp. HT1-2 around GFF2652

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
2,670,256	+		GFF2651	0.33	-0.1
2,670,277	+		GFF2651	0.35	-0.0
2,670,285	-		GFF2651	0.36	+1.0
2,670,287	+		GFF2651	0.36	-0.1
2,670,287	+		GFF2651	0.36	+0.1
2,670,287	+		GFF2651	0.36	-0.2
2,670,287	+		GFF2651	0.36	-1.2
2,670,295	-		GFF2651	0.36	-0.5
2,670,295	-		GFF2651	0.36	-1.7
2,670,295	-		GFF2651	0.36	-1.8
2,670,339	-		GFF2651	0.40	-1.1
2,670,350	-		GFF2651	0.41	-0.7
2,670,393	+		GFF2651	0.44	+1.1
2,670,393	+		GFF2651	0.44	-2.9
2,670,422	+		GFF2651	0.46	-0.2
2,670,422	+		GFF2651	0.46	+0.4
2,670,422	+		GFF2651	0.46	-0.4
2,670,422	+		GFF2651	0.46	-0.4
2,670,422	+		GFF2651	0.46	-0.1
2,670,422	+		GFF2651	0.46	-1.6
2,670,422	+		GFF2651	0.46	+0.9
2,670,427	+		GFF2651	0.47	-0.0
2,670,427	+		GFF2651	0.47	+1.9
2,670,430	-		GFF2651	0.47	-0.5
2,670,430	-		GFF2651	0.47	+0.4
2,670,430	-		GFF2651	0.47	-0.6
2,670,430	-		GFF2651	0.47	-0.1
2,670,430	-		GFF2651	0.47	-0.9
2,670,430	-		GFF2651	0.47	+0.1
2,670,430	-		GFF2651	0.47	-0.3
2,670,430	-		GFF2651	0.47	+0.3
2,670,430	-		GFF2651	0.47	+0.4
2,670,430	-		GFF2651	0.47	+0.1
2,670,444	+		GFF2651	0.48	+0.0
2,670,451	+		GFF2651	0.48	-0.2
2,670,452	-		GFF2651	0.49	+0.2
2,670,452	-		GFF2651	0.49	+1.2
2,670,459	-		GFF2651	0.49	-1.0
2,670,479	+		GFF2651	0.51	-0.3
2,670,479	+		GFF2651	0.51	+0.0
2,670,479	+		GFF2651	0.51	+0.0
2,670,479	+		GFF2651	0.51	-0.5
2,670,479	+		GFF2651	0.51	+1.5
2,670,479	+		GFF2651	0.51	+0.8
2,670,479	+		GFF2651	0.51	-0.7
2,670,484	+		GFF2651	0.51	-2.4
2,670,487	-		GFF2651	0.51	+0.0
2,670,487	-		GFF2651	0.51	-0.2
2,670,487	-		GFF2651	0.51	-0.1
2,670,487	-		GFF2651	0.51	+0.3
2,670,487	-		GFF2651	0.51	+0.3
2,670,497	-		GFF2651	0.52	-0.1
2,670,497	-		GFF2651	0.52	+0.7
2,670,497	-		GFF2651	0.52	-0.3
2,670,497	-		GFF2651	0.52	-0.8
2,670,498	+		GFF2651	0.52	+0.9
2,670,498	-		GFF2651	0.52	-0.6
2,670,585	-		GFF2651	0.59	-1.6
2,670,588	+		GFF2651	0.59	+0.4
2,670,595	-		GFF2651	0.60	-0.8
2,670,606	-		GFF2651	0.61	+0.8
2,670,612	+		GFF2651	0.61	+0.1
2,670,612	+		GFF2651	0.61	-0.3
2,670,620	-		GFF2651	0.62	+1.2
2,670,631	-		GFF2651	0.63	-0.6
2,670,631	-		GFF2651	0.63	+0.0
2,670,644	+		GFF2651	0.64	-1.8
2,670,652	-		GFF2651	0.64	-2.3
2,670,660	-		GFF2651	0.65	-0.6
2,670,662	-		GFF2651	0.65	+0.9
2,670,662	-		GFF2651	0.65	-0.4
2,670,713	+		GFF2651	0.69	-0.6
2,670,713	+		GFF2651	0.69	-0.9
2,670,713	+		GFF2651	0.69	-1.6
2,670,713	+		GFF2651	0.69	-0.6
2,670,713	+		GFF2651	0.69	+0.6
2,670,713	+		GFF2651	0.69	-0.4
2,670,713	+		GFF2651	0.69	-0.6
2,670,713	+		GFF2651	0.69	-0.9
2,670,713	+		GFF2651	0.69	-1.3
2,670,713	+		GFF2651	0.69	+0.4
2,670,721	-		GFF2651	0.70	-0.6
2,670,721	-		GFF2651	0.70	+0.4
2,670,721	-		GFF2651	0.70	-1.0
2,670,721	-		GFF2651	0.70	-0.9
2,670,721	-		GFF2651	0.70	+0.4
2,670,721	-		GFF2651	0.70	+1.2
2,670,721	-		GFF2651	0.70	+0.6
2,670,721	-		GFF2651	0.70	+0.3
2,670,721	-		GFF2651	0.70	-0.2
2,670,721	-		GFF2651	0.70	-0.7
2,670,723	+		GFF2651	0.70	+0.0
2,670,725	+		GFF2651	0.70	-0.5
2,670,818	+		GFF2651	0.77	-0.4
2,670,818	+		GFF2651	0.77	+1.5
2,670,821	-		GFF2651	0.77	+0.3
2,670,826	-		GFF2651	0.78	+0.1
2,670,826	-		GFF2651	0.78	+0.8
2,670,826	-		GFF2651	0.78	-0.4
2,670,828	+		GFF2651	0.78	-1.1
2,670,829	+		GFF2651	0.78	+1.0
2,670,835	+		GFF2651	0.78	+0.6
2,670,835	+		GFF2651	0.78	+1.7
2,670,835	+		GFF2651	0.78	-0.0
2,670,837	+		GFF2651	0.79	-0.6
2,670,845	-		GFF2651	0.79	-0.0
2,670,863	-		GFF2651	0.81	-1.4
2,670,895	-		GFF2651	0.83	-0.1
2,670,895	-		GFF2651	0.83	+0.0
2,670,899	+		GFF2651	0.83	-0.7
2,670,899	+		GFF2651	0.83	-0.5
2,670,926	-		GFF2651	0.86	-2.1
2,670,937	+		GFF2651	0.86	+1.0
2,670,954	+		GFF2651	0.88	-0.6
2,670,962	-		GFF2651	0.88	+1.4
2,670,964	+		GFF2651	0.89	-0.7
2,670,964	+		GFF2651	0.89	+1.0
2,670,964	+		GFF2651	0.89	-1.8
2,670,964	+		GFF2651	0.89	-0.2
2,670,964	+		GFF2651	0.89	-0.1
2,670,964	+		GFF2651	0.89	-1.0
2,670,964	+		GFF2651	0.89	-0.0
2,670,964	+		GFF2651	0.89	+0.2
2,670,964	+		GFF2651	0.89	-0.1
2,670,964	+		GFF2651	0.89	+0.1
2,670,964	+		GFF2651	0.89	-1.4
2,670,964	+		GFF2651	0.89	-1.2
2,670,964	+		GFF2651	0.89	-0.6
2,670,965	+		GFF2651	0.89	+0.8
2,670,967	-		GFF2651	0.89	-0.7
2,670,967	-		GFF2651	0.89	+0.1
2,670,967	-		GFF2651	0.89	-0.2
2,670,970	+		GFF2651	0.89	-0.5
2,670,970	+		GFF2651	0.89	+0.1
2,670,972	-		GFF2651	0.89	+0.3
2,670,972	-		GFF2651	0.89	-0.4
2,670,972	-		GFF2651	0.89	-0.3
2,670,972	-		GFF2651	0.89	-0.7
2,670,972	-		GFF2651	0.89	+0.0
2,670,972	-		GFF2651	0.89	-0.5
2,670,972	-		GFF2651	0.89	+0.1
2,670,972	-		GFF2651	0.89	-0.1
2,670,972	-		GFF2651	0.89	+0.1
2,670,972	-		GFF2651	0.89	-1.6
2,670,972	-		GFF2651	0.89	-0.0
2,670,972	-		GFF2651	0.89	-0.3
2,670,972	-		GFF2651	0.89	-0.2
2,670,972	-		GFF2651	0.89	-1.1
2,670,972	-		GFF2651	0.89	+0.8
2,670,972	-		GFF2651	0.89	+0.6
2,670,972	-		GFF2651	0.89	-1.3
2,670,973	-		GFF2651	0.89	+0.2
2,670,978	-		GFF2651	0.90	+0.4
2,671,048	+				+0.3
2,671,073	-				-0.1
2,671,078	+				-1.3
2,671,083	+				-0.2
2,671,148	-				+1.2
2,671,193	+				-1.7
2,671,201	-				-0.3
2,671,203	+				-0.5
2,671,203	+				+0.3
2,671,203	+				+0.1
2,671,203	+				-1.6
2,671,204	+				-0.9
2,671,205	+				-1.1
2,671,211	-				+0.6
2,671,211	-				+0.5
2,671,211	-				-0.2
2,671,211	-				+0.0
2,671,211	-				+0.8
2,671,211	-				+1.1
2,671,211	-				-0.9
2,671,211	-				-0.3
2,671,211	-				+0.1
2,671,213	-				-0.2
2,671,386	-		GFF2652	0.12	-0.1
2,671,401	-		GFF2652	0.14	-0.6
2,671,482	-		GFF2652	0.22	+0.1
2,671,552	+		GFF2652	0.28	+0.1
2,671,560	-		GFF2652	0.29	-0.3
2,671,604	-		GFF2652	0.33	+1.0
2,671,615	+		GFF2652	0.34	+0.0
2,671,622	-		GFF2652	0.35	+0.0
2,671,623	-		GFF2652	0.35	-2.0
2,671,642	+		GFF2652	0.37	-1.7
2,671,649	-		GFF2652	0.37	+0.3
2,671,650	-		GFF2652	0.38	+0.1
2,671,650	-		GFF2652	0.38	+0.1
2,671,715	-		GFF2652	0.44	+1.1
2,671,715	-		GFF2652	0.44	-0.6
2,671,715	-		GFF2652	0.44	-0.4
2,671,726	+		GFF2652	0.45	-0.9
2,671,727	-		GFF2652	0.45	+0.1
2,671,727	-		GFF2652	0.45	-0.6
2,671,741	+		GFF2652	0.46	-0.9
2,671,741	+		GFF2652	0.46	-1.7
2,671,749	-		GFF2652	0.47	+0.3
2,671,749	-		GFF2652	0.47	-1.6
2,671,749	-		GFF2652	0.47	+0.2
2,671,749	-		GFF2652	0.47	-0.4
2,671,778	-		GFF2652	0.50	-0.9
2,671,799	-		GFF2652	0.52	+0.1
2,671,893	-		GFF2652	0.61	-1.0
2,671,893	-		GFF2652	0.61	-0.7
2,671,904	-		GFF2652	0.62	-1.8
2,671,908	-		GFF2652	0.62	-2.0
2,671,908	-		GFF2652	0.62	-0.1
2,671,934	-		GFF2652	0.64	-0.2
2,671,997	-		GFF2652	0.70	-1.0
2,672,009	-		GFF2652	0.71	-0.3
2,672,019	-		GFF2652	0.72	-0.4
2,672,165	-		GFF2652	0.86	-1.4
2,672,293	+				-0.0
2,672,301	-				-1.8
2,672,301	-				-1.6
2,672,305	+				-0.3
2,672,311	-				-0.8
2,672,314	+				+0.3
2,672,603	+		GFF2653	0.21	-0.1
2,672,767	+		GFF2653	0.32	-0.6