Strain Fitness in Sphingobium sp. HT1-2 around GFF2597

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
2,612,660	+				-0.7
2,612,663	+		GFF2596	0.10	-0.3
2,612,663	+		GFF2596	0.10	-0.9
2,612,663	+		GFF2596	0.10	-0.9
2,612,663	+		GFF2596	0.10	-0.6
2,612,663	+		GFF2596	0.10	-2.3
2,612,670	-		GFF2596	0.11	-0.3
2,612,671	-		GFF2596	0.11	-0.6
2,612,671	-		GFF2596	0.11	-1.4
2,612,671	-		GFF2596	0.11	-0.7
2,612,677	-		GFF2596	0.12	+0.0
2,612,731	+		GFF2596	0.16	+0.5
2,612,731	+		GFF2596	0.16	-1.0
2,612,731	+		GFF2596	0.16	+0.3
2,612,731	+		GFF2596	0.16	+0.0
2,612,731	+		GFF2596	0.16	+0.1
2,612,731	+		GFF2596	0.16	-0.6
2,612,739	-		GFF2596	0.17	-0.2
2,612,739	-		GFF2596	0.17	-0.2
2,612,739	-		GFF2596	0.17	+0.5
2,612,739	-		GFF2596	0.17	+0.1
2,612,754	+		GFF2596	0.19	-0.2
2,612,778	+		GFF2596	0.21	-0.5
2,612,800	+		GFF2596	0.23	-0.6
2,612,800	+		GFF2596	0.23	-0.4
2,612,808	+		GFF2596	0.24	-0.1
2,612,808	+		GFF2596	0.24	-0.9
2,612,809	+		GFF2596	0.24	-0.4
2,612,810	+		GFF2596	0.24	+0.5
2,612,810	+		GFF2596	0.24	-2.4
2,612,810	+		GFF2596	0.24	+0.2
2,612,810	+		GFF2596	0.24	-0.9
2,612,810	+		GFF2596	0.24	+1.0
2,612,810	+		GFF2596	0.24	+1.7
2,612,810	+		GFF2596	0.24	-1.0
2,612,810	+		GFF2596	0.24	-1.8
2,612,810	+		GFF2596	0.24	-2.1
2,612,810	+		GFF2596	0.24	+1.1
2,612,810	+		GFF2596	0.24	-0.7
2,612,810	+		GFF2596	0.24	-1.6
2,612,810	+		GFF2596	0.24	-2.5
2,612,810	+		GFF2596	0.24	+1.2
2,612,810	+		GFF2596	0.24	+0.5
2,612,810	+		GFF2596	0.24	-1.4
2,612,810	+		GFF2596	0.24	+1.6
2,612,810	+		GFF2596	0.24	-0.3
2,612,810	+		GFF2596	0.24	-1.5
2,612,810	+		GFF2596	0.24	-1.3
2,612,810	+		GFF2596	0.24	+0.7
2,612,813	-		GFF2596	0.24	-0.4
2,612,816	-		GFF2596	0.24	-0.3
2,612,818	-		GFF2596	0.24	-0.4
2,612,818	-		GFF2596	0.24	-0.3
2,612,818	-		GFF2596	0.24	-1.6
2,612,818	-		GFF2596	0.24	-0.4
2,612,818	-		GFF2596	0.24	-1.4
2,612,818	-		GFF2596	0.24	+0.3
2,612,818	-		GFF2596	0.24	+0.2
2,612,818	-		GFF2596	0.24	+0.8
2,612,818	-		GFF2596	0.24	+0.1
2,612,818	-		GFF2596	0.24	+1.1
2,612,818	-		GFF2596	0.24	-1.6
2,612,818	-		GFF2596	0.24	+0.6
2,612,818	-		GFF2596	0.24	-0.4
2,612,818	-		GFF2596	0.24	-1.1
2,612,818	-		GFF2596	0.24	-0.2
2,612,856	-		GFF2596	0.28	-0.4
2,612,862	+		GFF2596	0.28	-0.6
2,612,870	-		GFF2596	0.29	-1.2
2,612,870	-		GFF2596	0.29	+1.4
2,612,870	-		GFF2596	0.29	-0.9
2,612,899	+		GFF2596	0.32	-0.4
2,612,909	+		GFF2596	0.33	+0.0
2,612,913	+		GFF2596	0.33	-1.0
2,612,917	-		GFF2596	0.34	+0.3
2,612,917	-		GFF2596	0.34	-1.1
2,612,937	+		GFF2596	0.35	-0.2
2,612,937	+		GFF2596	0.35	-1.8
2,612,944	-		GFF2596	0.36	+0.2
2,612,946	+		GFF2596	0.36	-0.7
2,612,952	-		GFF2596	0.37	-0.6
2,612,962	-		GFF2596	0.38	+0.9
2,612,976	-		GFF2596	0.39	+1.1
2,612,978	-		GFF2596	0.39	-2.0
2,612,981	+		GFF2596	0.39	+0.8
2,612,993	-		GFF2596	0.40	+0.8
2,613,030	-		GFF2596	0.44	+0.3
2,613,043	-		GFF2596	0.45	+0.7
2,613,056	+		GFF2596	0.46	-0.6
2,613,058	-		GFF2596	0.46	-0.9
2,613,059	-		GFF2596	0.47	-0.9
2,613,083	-		GFF2596	0.49	+1.5
2,613,133	+		GFF2596	0.53	+1.9
2,613,141	+		GFF2596	0.54	-0.8
2,613,141	+		GFF2596	0.54	-0.1
2,613,149	-		GFF2596	0.55	-1.7
2,613,181	-		GFF2596	0.58	+0.5
2,613,192	+		GFF2596	0.59	-0.5
2,613,209	+		GFF2596	0.60	+0.1
2,613,218	+		GFF2596	0.61	-1.6
2,613,244	-		GFF2596	0.63	+0.0
2,613,255	+		GFF2596	0.64	-0.1
2,613,255	+		GFF2596	0.64	-0.1
2,613,257	+		GFF2596	0.65	-0.4
2,613,263	-		GFF2596	0.65	-0.1
2,613,263	-		GFF2596	0.65	-0.6
2,613,265	+		GFF2596	0.65	-0.3
2,613,265	+		GFF2596	0.65	-2.7
2,613,292	-		GFF2596	0.68	-1.8
2,613,326	-		GFF2596	0.71	+0.1
2,613,345	+		GFF2596	0.73	-1.0
2,613,366	+		GFF2596	0.75	-0.6
2,613,389	-		GFF2596	0.77	-1.2
2,613,398	+		GFF2596	0.78	+0.9
2,613,408	+		GFF2596	0.78	+1.3
2,613,416	-		GFF2596	0.79	+2.1
2,613,416	-		GFF2596	0.79	-0.4
2,613,416	-		GFF2596	0.79	+0.6
2,613,416	-		GFF2596	0.79	+0.6
2,613,435	+		GFF2596	0.81	+0.8
2,613,438	-		GFF2596	0.81	+0.0
2,613,465	+		GFF2596	0.84	+0.1
2,613,465	+		GFF2596	0.84	-0.9
2,613,465	+		GFF2596	0.84	-0.5
2,613,473	-		GFF2596	0.84	+0.6
2,613,491	-		GFF2596	0.86	-1.1
2,613,494	+		GFF2596	0.86	-0.8
2,613,502	-		GFF2596	0.87	-2.8
2,613,512	+		GFF2596	0.88	-1.2
2,613,518	+		GFF2596	0.89	+1.3
2,613,518	+		GFF2596	0.89	-1.4
2,613,520	-		GFF2596	0.89	+0.3
2,613,520	-		GFF2596	0.89	-2.1
2,613,525	-		GFF2596	0.89	-0.6
2,613,526	-		GFF2596	0.89	+0.9
2,613,526	-		GFF2596	0.89	+0.5
2,613,526	-		GFF2596	0.89	-0.7
2,613,526	-		GFF2596	0.89	-1.9
2,613,528	+		GFF2596	0.89	-2.1
2,613,528	+		GFF2596	0.89	-0.3
2,613,528	+		GFF2596	0.89	-1.9
2,613,543	-				+0.2
2,613,546	+				-0.3
2,613,546	+				-2.4
2,613,547	+				+0.5
2,613,558	-				-1.4
2,613,560	+				-0.9
2,613,560	+				+0.9
2,613,560	+				-0.5
2,613,560	+				+0.1
2,613,568	-				+0.8
2,613,568	-				-1.8
2,613,571	-				-0.3
2,613,573	-				+0.7
2,613,582	+				+0.9
2,613,582	+				-1.6
2,613,634	+				-1.9
2,613,649	+				-2.0
2,613,652	+				+1.3
2,613,665	+				+0.0
2,613,665	+				-0.8
2,613,673	-				+1.3
2,613,681	+				+0.8
2,613,683	+				+0.6
2,613,689	-		GFF2597	0.10	+0.8
2,613,741	+		GFF2597	0.24	+0.1
2,613,752	+		GFF2597	0.27	-0.3
2,613,760	-		GFF2597	0.29	-1.0
2,613,774	+		GFF2597	0.32	-0.4
2,613,774	-		GFF2597	0.32	-0.2
2,613,774	-		GFF2597	0.32	+0.3
2,613,782	-		GFF2597	0.34	-0.4
2,613,782	-		GFF2597	0.34	-0.4
2,613,794	-		GFF2597	0.38	-0.1
2,613,796	+		GFF2597	0.38	-0.8
2,613,800	+		GFF2597	0.39	-2.6
2,613,804	-		GFF2597	0.40	-0.9
2,613,804	-		GFF2597	0.40	-2.4
2,613,814	-		GFF2597	0.43	-0.1
2,613,825	+		GFF2597	0.46	+0.3
2,613,833	+		GFF2597	0.48	+0.3
2,613,833	+		GFF2597	0.48	-2.6
2,613,841	-		GFF2597	0.50	+0.6
2,613,847	+		GFF2597	0.51	-0.5
2,613,852	+		GFF2597	0.53	-1.4
2,613,852	+		GFF2597	0.53	-2.0
2,613,852	+		GFF2597	0.53	-1.6
2,613,852	+		GFF2597	0.53	-1.7
2,613,852	+		GFF2597	0.53	-0.4
2,613,852	+		GFF2597	0.53	-0.4
2,613,857	+		GFF2597	0.54	-2.7
2,613,857	+		GFF2597	0.54	+0.2
2,613,857	+		GFF2597	0.54	-0.7
2,613,857	+		GFF2597	0.54	+0.3
2,613,857	+		GFF2597	0.54	-0.2
2,613,857	+		GFF2597	0.54	-0.3
2,613,857	+		GFF2597	0.54	-0.1
2,613,857	+		GFF2597	0.54	-1.0
2,613,857	+		GFF2597	0.54	+0.1
2,613,857	+		GFF2597	0.54	-1.6
2,613,857	+		GFF2597	0.54	+0.2
2,613,857	+		GFF2597	0.54	+0.3
2,613,857	+		GFF2597	0.54	-0.6
2,613,857	+		GFF2597	0.54	-2.3
2,613,857	+		GFF2597	0.54	-1.2
2,613,857	+		GFF2597	0.54	-0.5
2,613,857	+		GFF2597	0.54	+0.1
2,613,857	+		GFF2597	0.54	-0.8
2,613,857	+		GFF2597	0.54	-1.7
2,613,857	+		GFF2597	0.54	+0.3
2,613,857	+		GFF2597	0.54	-0.8
2,613,857	+		GFF2597	0.54	+0.0
2,613,857	+		GFF2597	0.54	+0.8
2,613,857	+		GFF2597	0.54	-1.1
2,613,857	+		GFF2597	0.54	-0.3
2,613,859	+		GFF2597	0.55	-1.9
2,613,859	+		GFF2597	0.55	+0.8
2,613,859	+		GFF2597	0.55	+0.5
2,613,860	-		GFF2597	0.55	-0.8
2,613,860	-		GFF2597	0.55	+0.6
2,613,860	-		GFF2597	0.55	-2.3
2,613,860	-		GFF2597	0.55	+0.1
2,613,862	-		GFF2597	0.55	-0.9
2,613,865	-		GFF2597	0.56	-1.7
2,613,865	-		GFF2597	0.56	-0.9
2,613,865	-		GFF2597	0.56	+0.1
2,613,865	-		GFF2597	0.56	-1.6
2,613,865	-		GFF2597	0.56	-0.8
2,613,865	-		GFF2597	0.56	+0.0
2,613,865	-		GFF2597	0.56	-0.2
2,613,865	-		GFF2597	0.56	-1.4
2,613,865	-		GFF2597	0.56	-0.1
2,613,865	-		GFF2597	0.56	-2.0
2,613,865	-		GFF2597	0.56	+1.2
2,613,865	-		GFF2597	0.56	-0.7
2,613,865	-		GFF2597	0.56	+0.0
2,613,865	-		GFF2597	0.56	-0.1
2,613,865	-		GFF2597	0.56	-2.3
2,613,867	-		GFF2597	0.57	+1.0
2,613,867	-		GFF2597	0.57	-0.8
2,613,867	-		GFF2597	0.57	-0.1
2,613,867	-		GFF2597	0.57	-0.2
2,613,875	-		GFF2597	0.59	-0.4
2,613,889	+		GFF2597	0.62	-0.1
2,613,899	-		GFF2597	0.65	-1.8
2,613,899	-		GFF2597	0.65	-0.8
2,613,936	+		GFF2597	0.75	-0.5
2,613,937	-		GFF2597	0.75	+0.5
2,613,942	-		GFF2597	0.76	-0.3
2,613,942	-		GFF2597	0.76	-1.0
2,613,942	-		GFF2597	0.76	-1.9
2,613,944	+		GFF2597	0.77	-1.9
2,613,976	-		GFF2597	0.85	-1.2
2,614,026	+				-0.1
2,614,034	-				+0.8
2,614,034	-				-0.0
2,614,073	+				-1.4
2,614,081	-				+0.2
2,614,087	+				+1.2
2,614,105	+				-0.6
2,614,109	+				-1.0
2,614,119	-				+0.1
2,614,145	-				-2.3
2,614,145	-				-0.1
2,614,151	+				-1.7
2,614,181	+		GFF2598	0.11	-0.5
2,614,210	-		GFF2598	0.13	-0.4
2,614,211	-		GFF2598	0.13	-0.2
2,614,216	-		GFF2598	0.13	-0.2
2,614,216	-		GFF2598	0.13	+0.9
2,614,224	-		GFF2598	0.14	+0.7
2,614,226	+		GFF2598	0.14	+0.8
2,614,229	-		GFF2598	0.14	+0.1
2,614,257	+		GFF2598	0.16	-0.3
2,614,279	+		GFF2598	0.17	+0.3
2,614,279	+		GFF2598	0.17	+0.0
2,614,279	+		GFF2598	0.17	+0.0
2,614,287	-		GFF2598	0.18	-0.9
2,614,287	-		GFF2598	0.18	+0.0
2,614,287	-		GFF2598	0.18	-1.0
2,614,288	+		GFF2598	0.18	-1.1
2,614,296	-		GFF2598	0.18	+1.1
2,614,297	-		GFF2598	0.19	+1.0
2,614,303	+		GFF2598	0.19	-0.6
2,614,310	+		GFF2598	0.19	+0.7
2,614,310	+		GFF2598	0.19	-0.4
2,614,311	-		GFF2598	0.20	-0.2
2,614,311	-		GFF2598	0.20	+0.6
2,614,331	-		GFF2598	0.21	-0.9
2,614,347	+		GFF2598	0.22	+0.5
2,614,351	+		GFF2598	0.22	-2.4
2,614,353	-		GFF2598	0.22	+1.1
2,614,369	+		GFF2598	0.24	-1.3
2,614,374	+		GFF2598	0.24	+0.4
2,614,382	-		GFF2598	0.24	+0.0
2,614,382	-		GFF2598	0.24	-2.2
2,614,382	-		GFF2598	0.24	+0.2
2,614,387	-		GFF2598	0.25	-0.2
2,614,396	+		GFF2598	0.25	+0.8
2,614,422	+		GFF2598	0.27	-0.2
2,614,463	+		GFF2598	0.30	+1.1
2,614,473	+		GFF2598	0.31	+0.6
2,614,481	-		GFF2598	0.31	+1.0
2,614,481	-		GFF2598	0.31	+0.7
2,614,491	-		GFF2598	0.32	-0.1
2,614,491	-		GFF2598	0.32	-1.4
2,614,497	-		GFF2598	0.32	-0.7
2,614,512	+		GFF2598	0.33	+0.9
2,614,520	-		GFF2598	0.34	-1.2
2,614,520	-		GFF2598	0.34	-0.7
2,614,520	-		GFF2598	0.34	+0.6
2,614,520	-		GFF2598	0.34	-0.5
2,614,520	-		GFF2598	0.34	-1.4
2,614,522	+		GFF2598	0.34	+0.9
2,614,531	-		GFF2598	0.35	+0.1
2,614,543	-		GFF2598	0.36	-0.4
2,614,543	-		GFF2598	0.36	-1.1
2,614,557	+		GFF2598	0.37	-0.9
2,614,565	-		GFF2598	0.37	-0.5
2,614,568	+		GFF2598	0.37	-1.1
2,614,573	+		GFF2598	0.38	+0.7
2,614,576	-		GFF2598	0.38	+1.0
2,614,578	+		GFF2598	0.38	-0.0
2,614,588	-		GFF2598	0.39	-1.2
2,614,623	-		GFF2598	0.41	-0.3
2,614,637	+		GFF2598	0.42	-1.2
2,614,638	-		GFF2598	0.42	-0.4
2,614,657	+		GFF2598	0.43	+0.0
2,614,659	+		GFF2598	0.44	-0.4
2,614,659	+		GFF2598	0.44	+0.5
2,614,660	-		GFF2598	0.44	-1.1
2,614,664	+		GFF2598	0.44	+0.7
2,614,667	-		GFF2598	0.44	-1.0
2,614,667	-		GFF2598	0.44	-0.9
2,614,669	+		GFF2598	0.44	-0.6
2,614,671	-		GFF2598	0.44	-0.9
2,614,677	-		GFF2598	0.45	-1.5
2,614,677	-		GFF2598	0.45	-0.5
2,614,677	-		GFF2598	0.45	+0.2
2,614,683	+		GFF2598	0.45	-1.0
2,614,738	+		GFF2598	0.49	-0.9
2,614,738	+		GFF2598	0.49	-0.6
2,614,738	+		GFF2598	0.49	+0.9
2,614,738	+		GFF2598	0.49	-0.6
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