Strain Fitness in Sphingobium sp. HT1-2 around GFF2225

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
2,243,041	+		GFF2224	0.50	-0.5
2,243,067	+		GFF2224	0.52	-0.1
2,243,085	+		GFF2224	0.53	-1.4
2,243,085	+		GFF2224	0.53	-0.0
2,243,093	-		GFF2224	0.54	-0.6
2,243,093	-		GFF2224	0.54	-0.0
2,243,093	-		GFF2224	0.54	+0.7
2,243,157	-		GFF2224	0.59	-1.9
2,243,182	+		GFF2224	0.61	+0.2
2,243,209	+		GFF2224	0.63	-0.6
2,243,212	-		GFF2224	0.63	+1.4
2,243,226	-		GFF2224	0.65	-0.7
2,243,243	-		GFF2224	0.66	+0.5
2,243,281	+		GFF2224	0.69	-0.1
2,243,281	+		GFF2224	0.69	+0.6
2,243,316	-		GFF2224	0.72	-0.9
2,243,318	+		GFF2224	0.72	-0.5
2,243,318	+		GFF2224	0.72	-0.7
2,243,318	+		GFF2224	0.72	+0.1
2,243,318	+		GFF2224	0.72	+0.7
2,243,326	-		GFF2224	0.73	-0.4
2,243,326	-		GFF2224	0.73	-0.2
2,243,326	-		GFF2224	0.73	-0.5
2,243,326	-		GFF2224	0.73	+0.6
2,243,326	-		GFF2224	0.73	+0.9
2,243,326	-		GFF2224	0.73	-1.3
2,243,326	-		GFF2224	0.73	-0.9
2,243,326	-		GFF2224	0.73	-2.2
2,243,342	+		GFF2224	0.74	-1.7
2,243,357	-		GFF2224	0.75	-3.1
2,243,372	+		GFF2224	0.77	+1.4
2,243,377	+		GFF2224	0.77	-1.4
2,243,377	+		GFF2224	0.77	+1.6
2,243,377	+		GFF2224	0.77	-1.1
2,243,377	+		GFF2224	0.77	+0.1
2,243,377	+		GFF2224	0.77	-0.2
2,243,385	-		GFF2224	0.78	-0.8
2,243,385	-		GFF2224	0.78	-1.3
2,243,385	-		GFF2224	0.78	-0.1
2,243,385	-		GFF2224	0.78	+0.1
2,243,385	-		GFF2224	0.78	+0.3
2,243,385	-		GFF2224	0.78	+0.8
2,243,385	-		GFF2224	0.78	-1.0
2,243,385	-		GFF2224	0.78	-3.1
2,243,385	-		GFF2224	0.78	-1.9
2,243,387	-		GFF2224	0.78	-0.8
2,243,398	+		GFF2224	0.79	-1.1
2,243,413	+		GFF2224	0.80	+0.1
2,243,423	+		GFF2224	0.81	-1.0
2,243,426	-		GFF2224	0.81	-0.6
2,243,431	-		GFF2224	0.81	+0.4
2,243,431	-		GFF2224	0.81	+0.7
2,243,431	-		GFF2224	0.81	-0.9
2,243,433	+		GFF2224	0.81	+0.4
2,243,438	+		GFF2224	0.82	+1.7
2,243,438	+		GFF2224	0.82	-0.7
2,243,438	+		GFF2224	0.82	+0.1
2,243,506	+		GFF2224	0.87	-0.8
2,243,513	-		GFF2224	0.88	+0.4
2,243,515	-		GFF2224	0.88	-1.2
2,243,515	-		GFF2224	0.88	-0.4
2,243,528	+		GFF2224	0.89	+1.0
2,243,531	-		GFF2224	0.89	+0.8
2,243,536	-		GFF2224	0.90	+0.4
2,243,558	-				+0.5
2,243,568	+				-0.6
2,243,568	+				-0.9
2,243,568	+				-3.2
2,243,576	-				+0.3
2,243,581	-				+1.3
2,243,585	+				-1.1
2,243,587	+				+0.2
2,243,587	+				-1.0
2,243,593	-				-0.1
2,243,595	-				-0.4
2,243,595	-				+1.4
2,243,600	-				-1.2
2,243,608	+				-2.1
2,243,616	-				-0.4
2,243,624	+				-1.6
2,243,640	+				-1.6
2,243,640	+				-0.9
2,243,640	+				+0.6
2,243,640	+				-2.7
2,243,640	+				-0.9
2,243,640	+				-0.3
2,243,658	-				-2.6
2,243,658	-				-0.1
2,243,663	+				+0.1
2,243,716	+				-0.7
2,243,724	+				+1.5
2,243,725	-				-1.2
2,243,739	+				+0.1
2,243,741	+				-0.7
2,243,749	-				-0.0
2,243,772	-				+0.0
2,243,793	-				-0.8
2,243,793	-				-0.5
2,243,814	+				-0.7
2,243,821	+				-0.7
2,243,821	+				+0.7
2,243,821	+				-1.0
2,243,821	+				+1.4
2,243,821	+				-1.0
2,243,821	+				+1.3
2,243,821	+				-1.3
2,243,821	+				-0.2
2,243,821	+				+0.1
2,243,821	+				-0.9
2,243,821	+				-0.9
2,243,822	-				+0.9
2,243,822	-				-1.3
2,243,822	-				-0.3
2,243,822	-				+0.3
2,243,823	-				+0.5
2,243,829	-				-0.5
2,243,829	-				+0.2
2,243,829	-				+1.5
2,243,829	-				-0.6
2,243,829	-				-1.7
2,243,829	-				-1.4
2,243,829	-				+1.1
2,243,829	-				+0.2
2,243,829	-				+0.2
2,243,836	+				+0.4
2,243,876	+				-2.2
2,243,881	+				+0.1
2,243,887	+				-0.9
2,243,889	-				-0.1
2,243,892	+				-1.4
2,243,895	-				-0.4
2,243,899	+				+1.4
2,243,906	+				+0.1
2,243,907	-				+0.7
2,243,919	-				-0.6
2,243,923	+				-0.7
2,243,927	+				-1.6
2,243,931	-				+1.5
2,243,931	-				-0.1
2,243,931	-				-0.8
2,243,931	-				+0.7
2,243,936	-				+0.2
2,243,936	-				+0.6
2,243,936	-				-1.7
2,243,959	+				-0.1
2,243,960	+				-1.8
2,243,960	+				-0.0
2,243,960	+				+0.0
2,243,960	+				+0.1
2,243,960	+				+0.4
2,243,960	+				+0.7
2,243,960	+				+1.1
2,243,960	+				+0.3
2,243,960	+				-1.7
2,243,960	+				+0.7
2,243,967	-				-0.3
2,243,968	-				+0.3
2,243,968	-				-0.3
2,243,968	-				+0.4
2,243,968	-				-0.6
2,243,968	-				-0.8
2,243,968	-				+1.4
2,243,968	-				+0.4
2,243,968	-				-0.5
2,243,968	-				-0.1
2,243,993	+				-0.5
2,244,015	+				+1.1
2,244,020	+				+0.0
2,244,020	+				+0.2
2,244,020	+				+0.7
2,244,034	-				+0.9
2,244,037	+				+0.3
2,244,045	-				-1.4
2,244,045	-				-0.4
2,244,060	+				+0.5
2,244,079	+				-3.0
2,244,079	+				-2.1
2,244,079	+				-0.1
2,244,079	+				-0.9
2,244,085	-				-0.5
2,244,087	-				-0.3
2,244,121	+				-0.8
2,244,126	-				+1.2
2,244,144	+				-0.4
2,244,144	+				+0.9
2,244,144	+				+0.6
2,244,144	+				-1.7
2,244,150	-				+0.1
2,244,152	-				-0.9
2,244,160	-				-1.0
2,244,173	-				-1.1
2,244,183	-				+0.5
2,244,186	+				+1.4
2,244,189	-				-2.1
2,244,191	+				-0.5
2,244,191	+				+0.5
2,244,194	-				+0.8
2,244,199	-				-0.9
2,244,218	+				+0.5
2,244,218	+				-1.6
2,244,218	-				+0.6
2,244,226	-				+0.1
2,244,226	-				+0.3
2,244,226	-				-1.1
2,244,231	+				+0.0
2,244,235	-				-1.0
2,244,258	+				-0.1
2,244,270	+				-0.9
2,244,278	-				+0.6
2,244,278	-				-0.6
2,244,287	+				-1.8
2,244,310	-				-0.7
2,244,312	+				+0.0
2,244,320	-				+0.4
2,244,339	+		GFF2225	0.10	-1.4
2,244,339	+		GFF2225	0.10	+0.1
2,244,347	-		GFF2225	0.11	-0.8
2,244,347	-		GFF2225	0.11	-0.6
2,244,347	-		GFF2225	0.11	+0.1
2,244,355	-		GFF2225	0.11	-0.4
2,244,357	-		GFF2225	0.11	+0.6
2,244,383	+		GFF2225	0.12	-2.2
2,244,383	+		GFF2225	0.12	+0.2
2,244,383	+		GFF2225	0.12	-1.2
2,244,385	+		GFF2225	0.12	-2.7
2,244,391	+		GFF2225	0.12	+0.7
2,244,391	-		GFF2225	0.12	-2.1
2,244,391	-		GFF2225	0.12	+1.0
2,244,391	-		GFF2225	0.12	-0.6
2,244,399	-		GFF2225	0.13	+0.6
2,244,399	-		GFF2225	0.13	-0.8
2,244,407	+		GFF2225	0.13	-1.0
2,244,409	-		GFF2225	0.13	-2.4
2,244,415	-		GFF2225	0.13	-1.4
2,244,420	+		GFF2225	0.13	-0.3
2,244,429	+		GFF2225	0.14	+1.7
2,244,437	-		GFF2225	0.14	-0.9
2,244,437	-		GFF2225	0.14	+0.0
2,244,437	-		GFF2225	0.14	+1.0
2,244,466	-		GFF2225	0.15	+0.4
2,244,469	-		GFF2225	0.15	-1.1
2,244,481	-		GFF2225	0.15	-0.9
2,244,524	-		GFF2225	0.17	-0.2
2,244,524	-		GFF2225	0.17	+0.1
2,244,560	-		GFF2225	0.18	+0.2
2,244,577	+		GFF2225	0.19	+1.2
2,244,577	+		GFF2225	0.19	+0.1
2,244,579	+		GFF2225	0.19	-0.7
2,244,584	+		GFF2225	0.19	-1.1
2,244,585	-		GFF2225	0.19	+0.7
2,244,585	-		GFF2225	0.19	-0.6
2,244,587	+		GFF2225	0.19	+1.0
2,244,589	+		GFF2225	0.19	+0.7
2,244,589	+		GFF2225	0.19	+0.3
2,244,589	+		GFF2225	0.19	-0.7
2,244,589	+		GFF2225	0.19	-0.4
2,244,589	+		GFF2225	0.19	+0.1
2,244,590	-		GFF2225	0.19	+0.5
2,244,597	-		GFF2225	0.19	-0.6
2,244,597	-		GFF2225	0.19	-1.0
2,244,611	-		GFF2225	0.20	+0.4
2,244,621	-		GFF2225	0.20	-2.4
2,244,621	-		GFF2225	0.20	-2.3
2,244,624	+		GFF2225	0.20	-0.1
2,244,631	-		GFF2225	0.21	-1.7
2,244,632	-		GFF2225	0.21	+0.9
2,244,638	+		GFF2225	0.21	-3.3
2,244,638	+		GFF2225	0.21	-0.5
2,244,638	+		GFF2225	0.21	-0.8
2,244,638	+		GFF2225	0.21	+0.1
2,244,638	+		GFF2225	0.21	+0.4
2,244,638	+		GFF2225	0.21	-0.5
2,244,646	-		GFF2225	0.21	-2.4
2,244,646	-		GFF2225	0.21	-0.8
2,244,646	-		GFF2225	0.21	-1.5
2,244,646	-		GFF2225	0.21	-0.0
2,244,646	-		GFF2225	0.21	-0.2
2,244,646	-		GFF2225	0.21	-1.1
2,244,648	+		GFF2225	0.21	-1.4
2,244,653	-		GFF2225	0.21	+1.3
2,244,655	+		GFF2225	0.22	-0.4
2,244,661	-		GFF2225	0.22	+0.0
2,244,668	-		GFF2225	0.22	-1.4
2,244,668	-		GFF2225	0.22	+0.3
2,244,689	+		GFF2225	0.23	-0.8
2,244,691	-		GFF2225	0.23	+0.4
2,244,721	+		GFF2225	0.24	-1.3
2,244,731	+		GFF2225	0.24	+0.6
2,244,731	+		GFF2225	0.24	+0.3
2,244,731	+		GFF2225	0.24	-1.8
2,244,731	+		GFF2225	0.24	+0.1
2,244,731	+		GFF2225	0.24	-0.2
2,244,731	+		GFF2225	0.24	-0.0
2,244,731	+		GFF2225	0.24	-1.1
2,244,731	+		GFF2225	0.24	-0.1
2,244,731	+		GFF2225	0.24	+1.2
2,244,731	+		GFF2225	0.24	+1.0
2,244,731	+		GFF2225	0.24	+0.0
2,244,731	+		GFF2225	0.24	-1.0
2,244,739	-		GFF2225	0.24	+0.3
2,244,739	-		GFF2225	0.24	-0.8
2,244,739	-		GFF2225	0.24	+0.1
2,244,739	-		GFF2225	0.24	-0.8
2,244,739	-		GFF2225	0.24	-1.1
2,244,739	-		GFF2225	0.24	-2.1
2,244,739	-		GFF2225	0.24	-2.5
2,244,739	-		GFF2225	0.24	-0.5
2,244,740	+		GFF2225	0.24	-0.3
2,244,747	+		GFF2225	0.25	-2.1
2,244,748	+		GFF2225	0.25	-1.9
2,244,748	+		GFF2225	0.25	-0.6
2,244,748	+		GFF2225	0.25	-1.8
2,244,748	+		GFF2225	0.25	+0.5
2,244,748	+		GFF2225	0.25	+0.0
2,244,748	+		GFF2225	0.25	+0.7
2,244,748	+		GFF2225	0.25	-1.8
2,244,748	+		GFF2225	0.25	+0.8
2,244,748	+		GFF2225	0.25	+0.4
2,244,748	-		GFF2225	0.25	-1.0
2,244,754	+		GFF2225	0.25	+0.2
2,244,754	+		GFF2225	0.25	+0.4
2,244,754	+		GFF2225	0.25	-0.6
2,244,756	-		GFF2225	0.25	-1.4
2,244,756	-		GFF2225	0.25	-0.6
2,244,756	-		GFF2225	0.25	-0.3
2,244,756	-		GFF2225	0.25	+1.3
2,244,756	-		GFF2225	0.25	+0.6
2,244,756	-		GFF2225	0.25	-1.1
2,244,756	-		GFF2225	0.25	-0.5
2,244,756	-		GFF2225	0.25	+0.7
2,244,762	-		GFF2225	0.25	-1.1
2,244,769	-		GFF2225	0.25	+0.4
2,244,769	-		GFF2225	0.25	-0.2
2,244,784	-		GFF2225	0.26	-1.1
2,244,784	-		GFF2225	0.26	-2.1
2,244,791	-		GFF2225	0.26	-2.3
2,244,797	+		GFF2225	0.26	+0.5
2,244,806	+		GFF2225	0.27	+0.0
2,244,806	+		GFF2225	0.27	-0.5
2,244,807	+		GFF2225	0.27	-0.3
2,244,816	+		GFF2225	0.27	+0.5
2,244,816	-		GFF2225	0.27	-1.2
2,244,841	-		GFF2225	0.28	+0.4
2,244,852	-		GFF2225	0.28	-1.2
2,244,870	+		GFF2225	0.29	-1.2
2,244,872	+		GFF2225	0.29	-1.9
2,244,872	+		GFF2225	0.29	-1.3
2,244,872	+		GFF2225	0.29	-0.0
2,244,880	-		GFF2225	0.29	-0.3
2,244,880	-		GFF2225	0.29	+0.1
2,244,880	-		GFF2225	0.29	+1.2
2,244,935	+		GFF2225	0.31	-0.1
2,244,938	-		GFF2225	0.31	-0.1
2,244,939	-		GFF2225	0.31	-0.2
2,244,941	+		GFF2225	0.31	-1.3
2,244,949	-		GFF2225	0.32	+0.8
2,244,966	+		GFF2225	0.32	-1.2
2,244,969	-		GFF2225	0.32	-1.6
2,244,969	-		GFF2225	0.32	-1.0
2,244,971	+		GFF2225	0.33	-0.2
2,244,974	-		GFF2225	0.33	-0.0
2,244,982	+		GFF2225	0.33	-0.5
2,244,995	-		GFF2225	0.33	+1.0
2,244,997	+		GFF2225	0.33	+0.7
2,244,997	+		GFF2225	0.33	+0.4
2,245,000	-		GFF2225	0.34	-0.4
2,245,008	+		GFF2225	0.34	-1.0
2,245,008	+		GFF2225	0.34	-0.9
2,245,016	-		GFF2225	0.34	-0.8
2,245,016	-		GFF2225	0.34	-0.0
2,245,018	+		GFF2225	0.34	-0.8
2,245,018	+		GFF2225	0.34	+0.2
2,245,018	+		GFF2225	0.34	-1.0
2,245,026	-		GFF2225	0.34	-0.4
2,245,039	-		GFF2225	0.35	-0.0
2,245,072	-		GFF2225	0.36	+0.3
2,245,078	+		GFF2225	0.36	-2.3
2,245,078	+		GFF2225	0.36	+1.4
2,245,078	+		GFF2225	0.36	-0.3
2,245,078	+		GFF2225	0.36	-1.6
2,245,078	+		GFF2225	0.36	+0.6
2,245,078	+		GFF2225	0.36	-1.1
2,245,078	+		GFF2225	0.36	-0.3
2,245,078	+		GFF2225	0.36	-0.0
2,245,078	+		GFF2225	0.36	-0.4
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2,245,086	-		GFF2225	0.37	+0.3
2,245,086	-		GFF2225	0.37	+0.7
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2,245,127	+		GFF2225	0.38	-0.7
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2,245,146	+		GFF2225	0.39	-1.4
2,245,158	+		GFF2225	0.39	-1.9
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2,245,224	+		GFF2225	0.41	-1.8
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2,245,256	-		GFF2225	0.42	+1.4
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2,245,285	-		GFF2225	0.43	-0.7
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2,245,317	-		GFF2225	0.45	-0.2
2,245,319	+		GFF2225	0.45	+0.6
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2,245,357	+		GFF2225	0.46	-0.6
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2,245,357	+		GFF2225	0.46	-1.0
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2,245,387	-		GFF2225	0.47	-1.3
2,245,393	-		GFF2225	0.47	-2.1
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2,245,411	+		GFF2225	0.48	-0.3
2,245,411	+		GFF2225	0.48	-2.5
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2,245,424	-		GFF2225	0.48	-1.7
2,245,426	-		GFF2225	0.48	-0.4
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2,245,550	-		GFF2225	0.53	-1.7
2,245,562	+		GFF2225	0.53	-1.0
2,245,567	+		GFF2225	0.53	-0.4
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2,245,574	-		GFF2225	0.54	-0.1
2,245,579	-		GFF2225	0.54	-0.1
2,245,581	+		GFF2225	0.54	-1.2
2,245,581	+		GFF2225	0.54	-0.4
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2,245,628	+		GFF2225	0.55	-0.5
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2,245,655	+		GFF2225	0.56	+0.0
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2,245,706	+		GFF2225	0.58	+0.0
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2,245,749	+		GFF2225	0.60	+0.8
2,245,749	+		GFF2225	0.60	-0.3
2,245,757	-		GFF2225	0.60	-0.4
2,245,765	-		GFF2225	0.60	+0.4
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2,245,846	-		GFF2225	0.63	+0.6
2,245,854	-		GFF2225	0.63	-0.8
2,245,855	+		GFF2225	0.63	-0.4
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2,245,896	-		GFF2225	0.65	+0.3
2,245,903	+		GFF2225	0.65	-0.7
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2,245,938	+		GFF2225	0.66	-0.3
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2,245,943	+		GFF2225	0.66	-0.2
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2,245,951	-		GFF2225	0.67	+0.3
2,245,951	-		GFF2225	0.67	-0.2
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2,246,008	+		GFF2225	0.69	+1.1
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2,246,008	+		GFF2225	0.69	+0.1
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2,246,010	+		GFF2225	0.69	+0.0
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2,246,016	-		GFF2225	0.69	-2.0
2,246,016	-		GFF2225	0.69	-1.7
2,246,016	-		GFF2225	0.69	+0.9
2,246,016	-		GFF2225	0.69	-1.2
2,246,016	-		GFF2225	0.69	-2.1
2,246,016	-		GFF2225	0.69	+0.9
2,246,016	-		GFF2225	0.69	-0.1
2,246,016	-		GFF2225	0.69	-0.8
2,246,016	-		GFF2225	0.69	-1.0
2,246,016	-		GFF2225	0.69	+0.1
2,246,016	-		GFF2225	0.69	-0.5
2,246,016	-		GFF2225	0.69	-0.9
2,246,016	-		GFF2225	0.69	-0.9
2,246,016	-		GFF2225	0.69	+0.9
2,246,016	-		GFF2225	0.69	+0.7
2,246,016	-		GFF2225	0.69	+0.1
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2,246,016	-		GFF2225	0.69	+0.4
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2,246,016	-		GFF2225	0.69	+0.0
2,246,016	-		GFF2225	0.69	-1.4
2,246,016	-		GFF2225	0.69	+0.7
2,246,016	-		GFF2225	0.69	+0.6
2,246,016	-		GFF2225	0.69	-1.4
2,246,026	-		GFF2225	0.69	-1.3
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2,246,030	+		GFF2225	0.69	+0.3
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2,246,078	+		GFF2225	0.71	+0.9
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