Strain Fitness in Sphingobium sp. HT1-2 around GFF2218

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
2,234,249	-		GFF2217	0.77	+0.2
2,234,249	-		GFF2217	0.77	+0.4
2,234,249	-		GFF2217	0.77	+0.8
2,234,249	-		GFF2217	0.77	+0.5
2,234,249	-		GFF2217	0.77	-1.0
2,234,249	-		GFF2217	0.77	-0.4
2,234,249	-		GFF2217	0.77	+0.1
2,234,249	-		GFF2217	0.77	+0.7
2,234,249	-		GFF2217	0.77	+0.2
2,234,249	-		GFF2217	0.77	-0.3
2,234,251	+		GFF2217	0.77	+0.3
2,234,264	-		GFF2217	0.77	+0.9
2,234,276	-		GFF2217	0.78	-0.5
2,234,288	+		GFF2217	0.78	-0.4
2,234,296	-		GFF2217	0.78	+0.6
2,234,309	-		GFF2217	0.79	+0.4
2,234,337	+		GFF2217	0.79	-1.0
2,234,337	+		GFF2217	0.79	+0.1
2,234,337	+		GFF2217	0.79	+0.6
2,234,342	+		GFF2217	0.80	+0.8
2,234,345	-		GFF2217	0.80	+0.9
2,234,345	-		GFF2217	0.80	-0.2
2,234,347	+		GFF2217	0.80	+0.9
2,234,355	-		GFF2217	0.80	+1.9
2,234,355	-		GFF2217	0.80	-0.5
2,234,356	-		GFF2217	0.80	-0.0
2,234,370	-		GFF2217	0.80	+0.9
2,234,372	+		GFF2217	0.80	+0.5
2,234,372	+		GFF2217	0.80	-0.2
2,234,380	-		GFF2217	0.81	+0.1
2,234,380	-		GFF2217	0.81	-0.3
2,234,380	-		GFF2217	0.81	+0.2
2,234,426	+		GFF2217	0.82	+0.2
2,234,426	+		GFF2217	0.82	-0.3
2,234,426	+		GFF2217	0.82	+0.7
2,234,426	+		GFF2217	0.82	-2.7
2,234,426	+		GFF2217	0.82	-0.9
2,234,427	+		GFF2217	0.82	-0.7
2,234,434	-		GFF2217	0.82	-0.3
2,234,434	-		GFF2217	0.82	-0.3
2,234,458	+		GFF2217	0.83	-0.5
2,234,503	+		GFF2217	0.84	-0.2
2,234,541	+		GFF2217	0.85	+1.2
2,234,552	+		GFF2217	0.86	-0.6
2,234,560	-		GFF2217	0.86	-0.1
2,234,597	+		GFF2217	0.87	+1.7
2,234,613	-		GFF2217	0.87	+0.6
2,234,643	-		GFF2217	0.88	+0.2
2,234,643	-		GFF2217	0.88	+0.1
2,234,731	-				+0.6
2,234,735	-				-1.4
2,234,735	-				-0.2
2,234,740	-				-0.9
2,234,782	+				-1.2
2,234,782	+				+1.3
2,234,809	+				-0.4
2,234,817	-				-0.4
2,234,819	+				+0.2
2,234,819	+				-0.0
2,234,824	+				-0.3
2,234,824	+				-1.9
2,234,827	-				+1.1
2,234,827	-				+1.1
2,234,832	-				+0.0
2,234,847	+				-1.0
2,234,847	+				+0.3
2,234,847	+				-0.0
2,234,886	-				-1.3
2,234,892	-				-1.1
2,234,981	+				+0.3
2,234,981	+				+0.0
2,234,983	-				+1.8
2,234,994	-				-0.9
2,235,040	+				-0.0
2,235,124	+				+1.2
2,235,132	-				-0.5
2,235,132	-				+0.5
2,235,132	-				-0.8
2,235,134	+				-0.5
2,235,134	+				+0.7
2,235,155	-				+0.2
2,235,177	+				+0.5
2,235,185	-				-0.5
2,235,196	+				+0.3
2,235,204	-				+1.2
2,235,204	-				-0.8
2,235,204	-				+0.8
2,235,204	-				-1.3
2,235,204	-				+0.5
2,235,227	+				+0.0
2,235,227	+				-0.6
2,235,235	-				+0.4
2,235,239	-				-0.5
2,235,295	+				-0.3
2,235,303	-				+0.1
2,235,397	+				+0.5
2,235,397	+				+1.0
2,235,400	-				-1.3
2,235,453	+		GFF2218	0.12	+1.3
2,235,466	+		GFF2218	0.13	-0.0
2,235,468	-		GFF2218	0.13	+0.3
2,235,471	+		GFF2218	0.13	-1.7
2,235,527	-		GFF2218	0.17	-0.9
2,235,527	-		GFF2218	0.17	-0.5
2,235,648	-		GFF2218	0.24	-0.3
2,235,660	+		GFF2218	0.25	-0.1
2,235,670	+		GFF2218	0.25	-0.8
2,235,670	+		GFF2218	0.25	-0.6
2,235,673	-		GFF2218	0.26	+0.0
2,235,678	-		GFF2218	0.26	-0.7
2,235,678	-		GFF2218	0.26	-2.1
2,235,678	-		GFF2218	0.26	-2.3
2,235,678	-		GFF2218	0.26	-0.6
2,235,690	+		GFF2218	0.27	+0.8
2,235,690	+		GFF2218	0.27	+0.4
2,235,690	+		GFF2218	0.27	-0.6
2,235,690	+		GFF2218	0.27	-1.1
2,235,703	-		GFF2218	0.27	-1.8
2,235,703	-		GFF2218	0.27	+1.0
2,235,715	+		GFF2218	0.28	+0.8
2,235,743	+		GFF2218	0.30	+0.7
2,235,743	+		GFF2218	0.30	+1.5
2,235,743	+		GFF2218	0.30	+1.4
2,235,743	+		GFF2218	0.30	+0.2
2,235,743	+		GFF2218	0.30	-0.3
2,235,743	+		GFF2218	0.30	-0.1
2,235,743	+		GFF2218	0.30	+1.4
2,235,746	-		GFF2218	0.30	-0.7
2,235,746	-		GFF2218	0.30	+0.0
2,235,748	+		GFF2218	0.30	-0.4
2,235,751	-		GFF2218	0.30	-1.0
2,235,751	-		GFF2218	0.30	+0.2
2,235,751	-		GFF2218	0.30	-0.5
2,235,751	-		GFF2218	0.30	-1.3
2,235,751	-		GFF2218	0.30	+0.3
2,235,751	-		GFF2218	0.30	-0.1
2,235,754	+		GFF2218	0.30	-1.4
2,235,754	+		GFF2218	0.30	-0.5
2,235,754	+		GFF2218	0.30	-0.3
2,235,754	+		GFF2218	0.30	-3.2
2,235,754	+		GFF2218	0.30	-0.4
2,235,754	+		GFF2218	0.30	+0.4
2,235,756	-		GFF2218	0.31	-0.6
2,235,759	+		GFF2218	0.31	-0.9
2,235,759	+		GFF2218	0.31	+0.3
2,235,759	+		GFF2218	0.31	-1.0
2,235,759	+		GFF2218	0.31	+0.5
2,235,759	+		GFF2218	0.31	-0.2
2,235,759	+		GFF2218	0.31	+1.7
2,235,762	-		GFF2218	0.31	+0.9
2,235,772	-		GFF2218	0.32	-0.5
2,235,772	-		GFF2218	0.32	+0.2
2,235,849	-		GFF2218	0.36	+1.1
2,235,865	-		GFF2218	0.37	+0.4
2,235,870	-		GFF2218	0.37	-2.7
2,235,874	-		GFF2218	0.38	-0.4
2,235,892	-		GFF2218	0.39	+0.3
2,235,909	-		GFF2218	0.40	+0.8
2,235,919	+		GFF2218	0.40	+0.1
2,235,919	-		GFF2218	0.40	+0.7
2,235,934	-		GFF2218	0.41	+0.7
2,235,959	+		GFF2218	0.43	-0.0
2,235,963	-		GFF2218	0.43	-0.7
2,235,969	+		GFF2218	0.43	-3.0
2,235,969	+		GFF2218	0.43	+0.3
2,236,031	+		GFF2218	0.47	+0.8
2,236,039	+		GFF2218	0.48	+0.4
2,236,039	-		GFF2218	0.48	+0.3
2,236,092	+		GFF2218	0.51	-0.4
2,236,100	-		GFF2218	0.51	+1.2
2,236,135	-		GFF2218	0.53	-0.6
2,236,198	-		GFF2218	0.57	-0.3
2,236,200	+		GFF2218	0.57	+1.1
2,236,220	-		GFF2218	0.58	-0.5
2,236,236	+		GFF2218	0.59	+0.6
2,236,244	-		GFF2218	0.60	+0.2
2,236,244	-		GFF2218	0.60	+0.4
2,236,310	+		GFF2218	0.64	-1.0
2,236,310	+		GFF2218	0.64	-0.9
2,236,310	+		GFF2218	0.64	-0.5
2,236,320	-		GFF2218	0.64	-0.5
2,236,409	+		GFF2218	0.70	+0.0
2,236,409	+		GFF2218	0.70	-0.8
2,236,428	+		GFF2218	0.71	-0.5
2,236,453	+		GFF2218	0.72	-1.9
2,236,461	-		GFF2218	0.73	-0.0
2,236,463	+		GFF2218	0.73	+2.2
2,236,471	+		GFF2218	0.73	+1.1
2,236,479	-		GFF2218	0.74	-0.2
2,236,484	-		GFF2218	0.74	+0.3
2,236,498	-		GFF2218	0.75	+1.2
2,236,528	-		GFF2218	0.77	+0.8
2,236,549	+		GFF2218	0.78	+0.9
2,236,549	+		GFF2218	0.78	+0.7
2,236,559	+		GFF2218	0.79	-0.1
2,236,592	-		GFF2218	0.81	+0.9
2,236,592	-		GFF2218	0.81	+0.7
2,236,612	+		GFF2218	0.82	-1.1
2,236,620	+		GFF2218	0.82	+0.2
2,236,620	+		GFF2218	0.82	-1.4
2,236,622	+		GFF2218	0.82	+0.8
2,236,622	+		GFF2218	0.82	-0.9
2,236,628	-		GFF2218	0.83	+1.9
2,236,630	-		GFF2218	0.83	-2.0
2,236,633	-		GFF2218	0.83	-0.7
2,236,641	+		GFF2218	0.84	+0.4
2,236,643	+		GFF2218	0.84	-0.4
2,236,643	+		GFF2218	0.84	+0.8
2,236,643	+		GFF2218	0.84	-1.0
2,236,681	+		GFF2218	0.86	+0.2
2,236,698	-		GFF2218	0.87	-1.8
2,236,698	-		GFF2218	0.87	+0.2
2,236,698	-		GFF2218	0.87	-0.3
2,236,806	-				-1.1
2,236,835	+				+0.7
2,236,843	-				+0.5
2,236,843	-				+0.6
2,236,843	-				-1.1
2,236,843	-				-1.9
2,236,871	+				+0.3
2,236,946	+		GFF2219	0.18	+0.4
2,236,970	+		GFF2219	0.23	-2.0
2,236,972	+		GFF2219	0.23	-0.1
2,236,972	+		GFF2219	0.23	+0.9
2,237,013	+		GFF2219	0.32	+0.7
2,237,118	+		GFF2219	0.55	+0.2
2,237,164	-		GFF2219	0.65	+1.8
2,237,299	+				+0.8
2,237,299	+				-1.2
2,237,299	+				+1.4
2,237,309	+				-0.1
2,237,317	-				-0.9
2,237,317	-				-0.4
2,237,338	-				-0.4
2,237,557	+		GFF2220	0.23	-0.2
2,237,557	+		GFF2220	0.23	-1.6
2,237,557	+		GFF2220	0.23	+1.4
2,237,559	+		GFF2220	0.24	+0.4
2,237,560	-		GFF2220	0.24	-1.2
2,237,570	+		GFF2220	0.26	+1.1
2,237,575	+		GFF2220	0.28	+0.8
2,237,575	+		GFF2220	0.28	+0.7
2,237,575	+		GFF2220	0.28	-0.5
2,237,575	+		GFF2220	0.28	-0.4
2,237,575	+		GFF2220	0.28	-0.4
2,237,575	+		GFF2220	0.28	-0.1
2,237,588	-		GFF2220	0.31	-0.3
2,237,663	+		GFF2220	0.48	-0.2
2,237,663	+		GFF2220	0.48	+0.4
2,237,670	+		GFF2220	0.50	-0.8
2,237,670	+		GFF2220	0.50	+0.4
2,237,670	+		GFF2220	0.50	+0.3
2,237,670	+		GFF2220	0.50	+1.2
2,237,670	+		GFF2220	0.50	-0.8
2,237,671	-		GFF2220	0.50	+0.4
2,237,671	-		GFF2220	0.50	-0.9
2,237,678	-		GFF2220	0.52	+1.2
2,237,678	-		GFF2220	0.52	+0.3
2,237,678	-		GFF2220	0.52	+0.5
2,237,678	-		GFF2220	0.52	-0.2
2,237,678	-		GFF2220	0.52	-0.2
2,237,696	-		GFF2220	0.56	-0.6
2,237,716	+		GFF2220	0.60	+0.8
2,237,724	-		GFF2220	0.62	-2.4
2,237,739	-		GFF2220	0.66	+0.8
2,237,740	+		GFF2220	0.66	-0.6
2,237,745	+		GFF2220	0.67	-0.4
2,237,748	-		GFF2220	0.68	+0.1
2,237,753	-		GFF2220	0.69	-0.8
2,237,772	-		GFF2220	0.73	+0.5