Strain Fitness in Sphingobium sp. HT1-2 around GFF1266

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
1,294,032	-				-0.2
1,294,046	+				-1.8
1,294,066	+				-1.1
1,294,066	+				-0.3
1,294,066	+				+0.1
1,294,074	-				-0.5
1,294,074	-				-1.7
1,294,087	-				+0.1
1,294,088	+				+0.2
1,294,093	+				+1.0
1,294,132	-				+0.9
1,294,143	-				-0.3
1,294,169	+				+0.0
1,294,177	-				+1.2
1,294,187	-		GFF1265	0.11	-0.3
1,294,187	-		GFF1265	0.11	-1.6
1,294,207	-		GFF1265	0.13	-1.1
1,294,222	+		GFF1265	0.15	+0.6
1,294,233	+		GFF1265	0.16	+0.0
1,294,239	-		GFF1265	0.17	+2.2
1,294,265	-		GFF1265	0.19	-2.6
1,294,266	+		GFF1265	0.19	-0.5
1,294,266	+		GFF1265	0.19	+0.3
1,294,266	+		GFF1265	0.19	+0.2
1,294,274	-		GFF1265	0.20	-2.4
1,294,274	-		GFF1265	0.20	-0.3
1,294,274	-		GFF1265	0.20	+0.2
1,294,276	+		GFF1265	0.21	+0.3
1,294,284	-		GFF1265	0.21	-2.9
1,294,291	-		GFF1265	0.22	-0.2
1,294,297	-		GFF1265	0.23	-2.3
1,294,301	-		GFF1265	0.23	+0.1
1,294,304	+		GFF1265	0.24	-2.7
1,294,304	+		GFF1265	0.24	-0.7
1,294,304	+		GFF1265	0.24	-1.6
1,294,311	+		GFF1265	0.24	+0.7
1,294,312	-		GFF1265	0.24	-1.3
1,294,333	+		GFF1265	0.27	+1.5
1,294,343	-		GFF1265	0.28	-0.3
1,294,360	+		GFF1265	0.29	-1.5
1,294,371	-		GFF1265	0.31	-1.3
1,294,371	-		GFF1265	0.31	-0.1
1,294,420	-		GFF1265	0.36	-0.2
1,294,423	+		GFF1265	0.36	-1.2
1,294,423	+		GFF1265	0.36	-0.3
1,294,423	+		GFF1265	0.36	+0.2
1,294,423	+		GFF1265	0.36	-0.3
1,294,423	+		GFF1265	0.36	-0.4
1,294,423	+		GFF1265	0.36	-0.1
1,294,423	+		GFF1265	0.36	-2.1
1,294,423	+		GFF1265	0.36	-0.9
1,294,423	+		GFF1265	0.36	+1.2
1,294,423	+		GFF1265	0.36	+0.8
1,294,423	+		GFF1265	0.36	+0.6
1,294,431	-		GFF1265	0.37	+0.5
1,294,431	-		GFF1265	0.37	-0.5
1,294,431	-		GFF1265	0.37	-0.1
1,294,431	-		GFF1265	0.37	+0.6
1,294,431	-		GFF1265	0.37	+0.1
1,294,431	-		GFF1265	0.37	-1.1
1,294,431	-		GFF1265	0.37	+0.1
1,294,431	-		GFF1265	0.37	-0.1
1,294,431	-		GFF1265	0.37	-0.4
1,294,431	-		GFF1265	0.37	-2.2
1,294,431	-		GFF1265	0.37	+2.0
1,294,431	-		GFF1265	0.37	-1.0
1,294,433	+		GFF1265	0.37	-1.2
1,294,433	+		GFF1265	0.37	+0.3
1,294,433	-		GFF1265	0.37	+0.4
1,294,441	-		GFF1265	0.38	+0.3
1,294,441	-		GFF1265	0.38	+0.6
1,294,443	+		GFF1265	0.38	+0.6
1,294,467	-		GFF1265	0.41	-0.0
1,294,495	+		GFF1265	0.44	+1.1
1,294,505	+		GFF1265	0.45	-1.0
1,294,513	-		GFF1265	0.46	+0.8
1,294,519	+		GFF1265	0.46	+0.1
1,294,527	-		GFF1265	0.47	-0.4
1,294,542	+		GFF1265	0.49	-0.3
1,294,542	+		GFF1265	0.49	+0.5
1,294,557	+		GFF1265	0.51	+0.9
1,294,572	-		GFF1265	0.52	-0.5
1,294,600	+		GFF1265	0.55	+0.9
1,294,621	+		GFF1265	0.57	+0.3
1,294,621	+		GFF1265	0.57	+0.3
1,294,625	+		GFF1265	0.58	-0.4
1,294,625	+		GFF1265	0.58	-0.6
1,294,629	-		GFF1265	0.58	+0.1
1,294,633	-		GFF1265	0.59	+0.1
1,294,660	+		GFF1265	0.62	-1.3
1,294,665	+		GFF1265	0.62	-0.9
1,294,678	+		GFF1265	0.63	-0.5
1,294,699	+		GFF1265	0.66	-0.6
1,294,707	-		GFF1265	0.67	+0.6
1,294,752	+		GFF1265	0.71	-1.7
1,294,760	-		GFF1265	0.72	-0.8
1,294,760	-		GFF1265	0.72	+0.9
1,294,763	+		GFF1265	0.73	-0.2
1,294,763	+		GFF1265	0.73	-0.5
1,294,763	+		GFF1265	0.73	-1.0
1,294,763	+		GFF1265	0.73	-0.6
1,294,763	+		GFF1265	0.73	+0.1
1,294,763	+		GFF1265	0.73	+0.5
1,294,763	+		GFF1265	0.73	+0.1
1,294,771	-		GFF1265	0.73	-2.1
1,294,771	-		GFF1265	0.73	+0.3
1,294,771	-		GFF1265	0.73	+0.4
1,294,771	-		GFF1265	0.73	+0.8
1,294,771	-		GFF1265	0.73	-1.1
1,294,771	-		GFF1265	0.73	+0.5
1,294,771	-		GFF1265	0.73	+0.3
1,294,776	-		GFF1265	0.74	-1.4
1,294,781	-		GFF1265	0.74	-2.2
1,294,793	+		GFF1265	0.76	-0.4
1,294,801	-		GFF1265	0.77	+0.3
1,294,801	-		GFF1265	0.77	+0.1
1,294,801	-		GFF1265	0.77	-0.6
1,294,801	-		GFF1265	0.77	+0.5
1,294,844	+		GFF1265	0.81	-0.5
1,294,844	+		GFF1265	0.81	-0.2
1,294,844	+		GFF1265	0.81	-3.4
1,294,844	+		GFF1265	0.81	-1.0
1,294,844	+		GFF1265	0.81	-2.0
1,294,844	+		GFF1265	0.81	+0.7
1,294,844	+		GFF1265	0.81	+0.6
1,294,844	+		GFF1265	0.81	-0.1
1,294,844	+		GFF1265	0.81	-0.7
1,294,844	+		GFF1265	0.81	+1.0
1,294,844	+		GFF1265	0.81	-2.2
1,294,844	+		GFF1265	0.81	+0.5
1,294,844	+		GFF1265	0.81	-1.0
1,294,844	+		GFF1265	0.81	-0.0
1,294,844	+		GFF1265	0.81	-0.7
1,294,844	+		GFF1265	0.81	+0.1
1,294,852	-		GFF1265	0.82	+0.5
1,294,852	-		GFF1265	0.82	-0.4
1,294,852	-		GFF1265	0.82	-0.0
1,294,852	-		GFF1265	0.82	-0.4
1,294,852	-		GFF1265	0.82	+1.4
1,294,852	-		GFF1265	0.82	-1.1
1,294,852	-		GFF1265	0.82	+0.9
1,294,852	-		GFF1265	0.82	-1.3
1,294,852	-		GFF1265	0.82	-1.7
1,294,852	-		GFF1265	0.82	-1.5
1,294,852	-		GFF1265	0.82	-0.1
1,294,852	-		GFF1265	0.82	+2.2
1,294,852	-		GFF1265	0.82	+0.5
1,294,852	-		GFF1265	0.82	+0.3
1,294,852	-		GFF1265	0.82	-1.7
1,294,862	-		GFF1265	0.83	-0.8
1,294,862	-		GFF1265	0.83	-0.4
1,294,873	+		GFF1265	0.84	+1.1
1,294,873	+		GFF1265	0.84	-1.5
1,294,875	-		GFF1265	0.85	+0.2
1,294,889	+		GFF1265	0.86	+0.4
1,294,897	-		GFF1265	0.87	+0.7
1,294,905	-		GFF1265	0.88	-0.3
1,294,916	-		GFF1265	0.89	+0.3
1,294,937	-				+0.1
1,294,968	+				+0.6
1,294,968	+				+0.2
1,294,970	+				-0.8
1,294,978	-				-0.6
1,294,978	-				+0.1
1,294,983	-				-2.0
1,294,992	-				+1.8
1,294,992	-				-0.4
1,295,021	+				-0.4
1,295,021	+				-0.4
1,295,021	+				-0.6
1,295,057	+				-0.9
1,295,057	+				-0.2
1,295,058	-				+0.8
1,295,065	-				-3.2
1,295,086	+				-1.2
1,295,098	+				+0.3
1,295,113	+				+0.3
1,295,113	+				-0.4
1,295,121	-				+0.1
1,295,121	-				-0.1
1,295,121	-				-1.3
1,295,121	-				-1.2
1,295,123	+				+1.6
1,295,132	+				-0.8
1,295,132	+				+1.3
1,295,140	-				+0.1
1,295,141	-				-0.1
1,295,164	+		GFF1266	0.11	-0.4
1,295,204	-		GFF1266	0.14	+0.5
1,295,207	+		GFF1266	0.15	-2.8
1,295,215	+		GFF1266	0.15	-1.5
1,295,225	+		GFF1266	0.16	-1.5
1,295,226	+		GFF1266	0.16	-0.4
1,295,232	+		GFF1266	0.16	-0.3
1,295,232	+		GFF1266	0.16	-0.5
1,295,233	-		GFF1266	0.16	+0.0
1,295,233	-		GFF1266	0.16	-0.1
1,295,234	-		GFF1266	0.16	+0.6
1,295,237	+		GFF1266	0.17	-0.3
1,295,240	-		GFF1266	0.17	-0.1
1,295,240	-		GFF1266	0.17	-0.5
1,295,254	-		GFF1266	0.18	+0.2
1,295,259	+		GFF1266	0.18	-1.1
1,295,264	+		GFF1266	0.19	-0.1
1,295,264	+		GFF1266	0.19	-0.0
1,295,264	+		GFF1266	0.19	-1.3
1,295,264	+		GFF1266	0.19	-1.9
1,295,269	+		GFF1266	0.19	+0.0
1,295,272	-		GFF1266	0.19	-1.1
1,295,272	-		GFF1266	0.19	+0.6
1,295,272	-		GFF1266	0.19	-0.7
1,295,272	-		GFF1266	0.19	+1.6
1,295,272	-		GFF1266	0.19	-0.4
1,295,272	-		GFF1266	0.19	-1.6
1,295,272	-		GFF1266	0.19	+0.1
1,295,272	-		GFF1266	0.19	-0.3
1,295,272	-		GFF1266	0.19	-2.0
1,295,272	-		GFF1266	0.19	-0.4
1,295,272	-		GFF1266	0.19	+0.5
1,295,355	-		GFF1266	0.25	+1.0
1,295,391	-		GFF1266	0.28	+0.4
1,295,410	+		GFF1266	0.29	+0.3
1,295,420	+		GFF1266	0.30	+0.4
1,295,450	+		GFF1266	0.32	-1.7
1,295,450	+		GFF1266	0.32	-0.3
1,295,458	-		GFF1266	0.33	+0.1
1,295,477	+		GFF1266	0.34	-1.4
1,295,486	+		GFF1266	0.35	-0.9
1,295,515	+		GFF1266	0.37	-1.1
1,295,523	+		GFF1266	0.37	-2.5
1,295,523	-		GFF1266	0.37	+0.3
1,295,530	-		GFF1266	0.38	-0.9
1,295,537	-		GFF1266	0.38	-0.4
1,295,539	+		GFF1266	0.38	-0.5
1,295,546	+		GFF1266	0.39	-2.3
1,295,546	+		GFF1266	0.39	+0.6
1,295,546	+		GFF1266	0.39	+0.7
1,295,547	-		GFF1266	0.39	-1.5
1,295,561	+		GFF1266	0.40	+0.8
1,295,561	+		GFF1266	0.40	-0.0
1,295,564	-		GFF1266	0.40	-0.5
1,295,564	-		GFF1266	0.40	+0.6
1,295,564	-		GFF1266	0.40	-1.2
1,295,569	-		GFF1266	0.41	+0.5
1,295,569	-		GFF1266	0.41	-0.7
1,295,588	-		GFF1266	0.42	+0.5
1,295,601	-		GFF1266	0.43	-0.4
1,295,609	+		GFF1266	0.43	-0.6
1,295,613	-		GFF1266	0.44	+0.2
1,295,614	-		GFF1266	0.44	+1.0
1,295,634	+		GFF1266	0.45	-2.6
1,295,654	+		GFF1266	0.47	-1.6
1,295,654	+		GFF1266	0.47	-2.5
1,295,654	+		GFF1266	0.47	+0.1
1,295,662	-		GFF1266	0.47	-1.7
1,295,662	-		GFF1266	0.47	+1.3
1,295,662	-		GFF1266	0.47	+1.0
1,295,662	-		GFF1266	0.47	-1.2
1,295,672	+		GFF1266	0.48	+0.7
1,295,673	+		GFF1266	0.48	+0.0
1,295,722	+		GFF1266	0.51	+0.4
1,295,722	+		GFF1266	0.51	-1.0
1,295,722	+		GFF1266	0.51	-0.2
1,295,722	+		GFF1266	0.51	-1.8
1,295,722	+		GFF1266	0.51	+0.7
1,295,722	+		GFF1266	0.51	+0.1
1,295,722	+		GFF1266	0.51	-1.2
1,295,722	+		GFF1266	0.51	-0.8
1,295,722	+		GFF1266	0.51	-0.3
1,295,730	-		GFF1266	0.52	-1.7
1,295,730	-		GFF1266	0.52	+0.2
1,295,730	-		GFF1266	0.52	+0.4
1,295,730	-		GFF1266	0.52	-1.4
1,295,730	-		GFF1266	0.52	+0.1
1,295,730	-		GFF1266	0.52	+0.5
1,295,730	-		GFF1266	0.52	-1.5
1,295,730	-		GFF1266	0.52	-3.0
1,295,730	-		GFF1266	0.52	+0.5
1,295,730	-		GFF1266	0.52	+0.4
1,295,730	-		GFF1266	0.52	-0.8
1,295,730	-		GFF1266	0.52	-0.0
1,295,740	-		GFF1266	0.53	-0.9
1,295,740	-		GFF1266	0.53	+0.2
1,295,758	+		GFF1266	0.54	+0.6
1,295,763	+		GFF1266	0.54	+0.1
1,295,771	-		GFF1266	0.55	-1.4
1,295,771	-		GFF1266	0.55	-0.2
1,295,771	-		GFF1266	0.55	+0.8
1,295,771	-		GFF1266	0.55	-1.1
1,295,771	-		GFF1266	0.55	-2.9
1,295,773	+		GFF1266	0.55	-2.1
1,295,809	+		GFF1266	0.58	+0.2
1,295,809	+		GFF1266	0.58	-0.7
1,295,809	+		GFF1266	0.58	-0.9
1,295,809	+		GFF1266	0.58	-0.9
1,295,809	+		GFF1266	0.58	-0.0
1,295,809	+		GFF1266	0.58	+1.1
1,295,809	+		GFF1266	0.58	+0.6
1,295,814	+		GFF1266	0.58	-1.2
1,295,814	+		GFF1266	0.58	-1.6
1,295,814	+		GFF1266	0.58	+0.7
1,295,817	-		GFF1266	0.58	+0.1
1,295,817	-		GFF1266	0.58	-0.3
1,295,817	-		GFF1266	0.58	-2.1
1,295,817	-		GFF1266	0.58	-1.8
1,295,817	-		GFF1266	0.58	+0.9
1,295,817	-		GFF1266	0.58	+0.3
1,295,822	-		GFF1266	0.59	+0.6
1,295,822	-		GFF1266	0.59	-1.2
1,295,822	-		GFF1266	0.59	-1.7
1,295,822	-		GFF1266	0.59	-0.5
1,295,854	-		GFF1266	0.61	+0.7
1,295,856	+		GFF1266	0.61	-0.2
1,295,866	+		GFF1266	0.62	+1.3
1,295,876	+		GFF1266	0.63	+0.1
1,295,884	-		GFF1266	0.63	+0.8
1,295,884	-		GFF1266	0.63	-1.0
1,295,889	-		GFF1266	0.63	-0.1
1,295,891	+		GFF1266	0.64	-0.6
1,295,897	-		GFF1266	0.64	-1.1
1,295,921	+		GFF1266	0.66	+0.5
1,295,929	+		GFF1266	0.66	-0.6
1,295,929	-		GFF1266	0.66	+0.2
1,295,975	-		GFF1266	0.70	-0.3
1,296,014	-		GFF1266	0.72	+0.8
1,296,019	+		GFF1266	0.73	+1.1
1,296,021	+		GFF1266	0.73	+0.5
1,296,028	+		GFF1266	0.73	-0.7
1,296,036	-		GFF1266	0.74	+0.1
1,296,059	-		GFF1266	0.76	-0.6
1,296,059	-		GFF1266	0.76	-1.4
1,296,059	-		GFF1266	0.76	-0.5
1,296,059	-		GFF1266	0.76	+0.5
1,296,070	+		GFF1266	0.76	+1.8
1,296,075	+		GFF1266	0.77	-0.5
1,296,078	-		GFF1266	0.77	-1.4
1,296,080	+		GFF1266	0.77	+0.5
1,296,089	-		GFF1266	0.78	+0.5
1,296,112	-		GFF1266	0.79	-1.3
1,296,113	-		GFF1266	0.79	-0.2
1,296,144	+		GFF1266	0.82	-0.1
1,296,152	-		GFF1266	0.82	-1.4
1,296,191	-		GFF1266	0.85	-0.0
1,296,214	-		GFF1266	0.87	+0.6
1,296,221	+		GFF1266	0.87	-1.1
1,296,221	+		GFF1266	0.87	+0.2
1,296,223	+		GFF1266	0.87	+0.1
1,296,229	-		GFF1266	0.88	-0.1
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