Strain Fitness in Sphingobium sp. HT1-2 around GFF1163

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
1,168,085	+				-1.6
1,168,085	+				-0.4
1,168,085	+				-2.8
1,168,085	+				-0.2
1,168,086	-				+0.3
1,168,086	-				-1.1
1,168,093	-				+0.0
1,168,094	+				-0.5
1,168,095	+				+0.4
1,168,099	+				-0.6
1,168,099	+				-0.1
1,168,099	+				-1.8
1,168,099	+				-0.4
1,168,107	-				-2.3
1,168,107	-				-0.4
1,168,107	-				-0.2
1,168,133	+				+0.3
1,168,133	+				+0.4
1,168,141	-				+0.9
1,168,141	-				+1.4
1,168,151	-				-0.4
1,168,156	+				+0.4
1,168,164	-				+0.4
1,168,208	+				+0.1
1,168,208	+				+0.2
1,168,246	-				+0.2
1,168,258	+				-1.4
1,168,594	+				+0.5
1,168,599	+				+0.9
1,168,643	-				+0.1
1,168,645	-				+0.7
1,168,696	+				-2.2
1,168,701	+				-1.4
1,168,704	+				+0.7
1,168,704	+				+0.2
1,168,828	+				+1.4
1,168,828	+				-0.7
1,168,840	+				+1.0
1,168,848	-				-0.2
1,168,850	-				+0.1
1,168,855	+				+0.1
1,168,860	+				+0.3
1,168,894	+				-0.8
1,168,900	-				+0.0
1,168,923	+				-0.3
1,168,925	+				+0.8
1,168,925	+				+0.4
1,168,925	+				-0.5
1,168,931	-				+0.3
1,168,946	+				-0.4
1,168,946	+				-1.1
1,168,954	-				-0.2
1,168,954	-				+1.3
1,168,959	+				-1.0
1,168,966	+				+0.2
1,168,983	-				-0.2
1,168,999	-				-0.8
1,169,001	+				-0.2
1,169,001	+				-0.8
1,169,019	-				-0.6
1,169,019	-				+0.8
1,169,019	-				+0.6
1,169,019	-				-1.1
1,169,019	-				+0.8
1,169,061	+				-1.6
1,169,085	+				-0.3
1,169,104	+		GFF1163	0.15	+0.7
1,169,134	+		GFF1163	0.31	+0.6
1,169,140	-		GFF1163	0.34	-0.5
1,169,166	-		GFF1163	0.49	+0.5
1,169,168	+		GFF1163	0.50	+1.0
1,169,168	+		GFF1163	0.50	+0.6
1,169,168	+		GFF1163	0.50	+0.1
1,169,170	+		GFF1163	0.51	-2.2
1,169,170	+		GFF1163	0.51	-0.7
1,169,176	-		GFF1163	0.54	+0.2
1,169,176	-		GFF1163	0.54	-0.3
1,169,176	-		GFF1163	0.54	+0.6
1,169,180	+		GFF1163	0.56	-0.1
1,169,188	-		GFF1163	0.61	+0.2
1,169,192	-		GFF1163	0.63	-2.1
1,169,214	+		GFF1163	0.75	-1.0
1,169,214	+		GFF1163	0.75	+0.2
1,169,214	+		GFF1163	0.75	-0.3
1,169,214	+		GFF1163	0.75	+0.4
1,169,214	+		GFF1163	0.75	-0.1
1,169,214	+		GFF1163	0.75	+0.1
1,169,222	-		GFF1163	0.79	-1.5
1,169,222	-		GFF1163	0.79	+0.3
1,169,227	+		GFF1163	0.82	+0.5
1,169,236	+		GFF1163	0.87	+0.2
1,169,240	-		GFF1163	0.89	-1.9
1,169,241	+				-0.3
1,169,253	+				+0.1
1,169,254	-				+0.2
1,169,259	-				+0.7
1,169,260	+				-0.5
1,169,263	-				-0.5
1,169,268	-				+1.3
1,169,305	+				-0.5
1,169,319	+				-0.3
1,169,324	+				-0.3
1,169,336	+				+0.1
1,169,354	-				+0.3
1,169,397	-				+0.0
1,169,397	-				-1.3
1,169,397	-				-0.6
1,169,397	-				+0.9
1,169,398	+				-1.6
1,169,474	+				+0.0
1,169,502	+				-0.1
1,169,545	+				+0.1
1,169,553	-				+0.1
1,169,564	-				-0.5
1,169,578	-				-0.8
1,169,585	+				+0.6
1,169,592	+		GFF1164	0.10	-0.9
1,169,594	+		GFF1164	0.10	+0.3
1,169,594	+		GFF1164	0.10	-0.3
1,169,594	+		GFF1164	0.10	-0.6
1,169,623	-		GFF1164	0.12	-1.0
1,169,624	+		GFF1164	0.12	-0.1
1,169,629	+		GFF1164	0.12	-0.8
1,169,632	-		GFF1164	0.13	+0.8
1,169,632	-		GFF1164	0.13	-1.4
1,169,637	-		GFF1164	0.13	-0.5
1,169,637	-		GFF1164	0.13	-1.6
1,169,670	+		GFF1164	0.15	-1.6
1,169,672	+		GFF1164	0.15	-0.1
1,169,680	-		GFF1164	0.16	+1.2
1,169,686	+		GFF1164	0.16	-0.2
1,169,689	-		GFF1164	0.16	+0.4
1,169,751	+		GFF1164	0.20	-1.4
1,169,766	-		GFF1164	0.21	-0.6
1,169,766	-		GFF1164	0.21	-1.1
1,169,768	+		GFF1164	0.22	-0.6
1,169,776	-		GFF1164	0.22	-1.3
1,169,783	+		GFF1164	0.23	-2.7
1,169,788	+		GFF1164	0.23	-0.2
1,169,794	-		GFF1164	0.23	-0.7
1,169,807	+		GFF1164	0.24	-0.4
1,169,820	+		GFF1164	0.25	+0.7
1,169,820	+		GFF1164	0.25	+0.6
1,169,828	+		GFF1164	0.26	-1.1
1,169,828	+		GFF1164	0.26	+0.2
1,169,834	+		GFF1164	0.26	-0.3
1,169,834	+		GFF1164	0.26	-1.0
1,169,900	-		GFF1164	0.30	-1.9
1,169,916	+		GFF1164	0.31	-0.7
1,169,916	-		GFF1164	0.31	-0.6
1,169,918	+		GFF1164	0.31	-1.5
1,169,918	+		GFF1164	0.31	+0.2
1,169,918	+		GFF1164	0.31	+0.1
1,169,921	-		GFF1164	0.32	+0.3
1,169,954	+		GFF1164	0.34	-0.0
1,169,958	+		GFF1164	0.34	+0.7
1,169,958	+		GFF1164	0.34	+0.0
1,169,966	-		GFF1164	0.35	-0.7
1,169,966	-		GFF1164	0.35	+0.1
1,170,010	+		GFF1164	0.37	-1.0
1,170,020	-		GFF1164	0.38	-1.0
1,170,025	-		GFF1164	0.38	-0.5
1,170,025	-		GFF1164	0.38	-0.9
1,170,025	-		GFF1164	0.38	-0.9
1,170,028	-		GFF1164	0.39	-2.4
1,170,035	+		GFF1164	0.39	-0.6
1,170,035	+		GFF1164	0.39	-1.2
1,170,043	-		GFF1164	0.40	-0.3
1,170,056	+		GFF1164	0.40	-0.7
1,170,056	+		GFF1164	0.40	+0.5
1,170,056	+		GFF1164	0.40	-0.5
1,170,056	+		GFF1164	0.40	-0.1
1,170,064	-		GFF1164	0.41	-1.2
1,170,082	+		GFF1164	0.42	+1.7
1,170,096	+		GFF1164	0.43	-0.1
1,170,097	-		GFF1164	0.43	-1.7
1,170,119	-		GFF1164	0.45	-0.1
1,170,122	+		GFF1164	0.45	-0.8
1,170,130	-		GFF1164	0.45	-2.5
1,170,146	+		GFF1164	0.46	-0.5
1,170,146	+		GFF1164	0.46	+1.7
1,170,146	+		GFF1164	0.46	-0.7
1,170,146	+		GFF1164	0.46	+1.0
1,170,146	+		GFF1164	0.46	+0.9
1,170,146	+		GFF1164	0.46	-0.4
1,170,154	-		GFF1164	0.47	-1.6
1,170,154	-		GFF1164	0.47	+1.6
1,170,154	-		GFF1164	0.47	-1.9
1,170,154	-		GFF1164	0.47	-0.7
1,170,154	-		GFF1164	0.47	-1.6
1,170,154	-		GFF1164	0.47	-0.8
1,170,154	-		GFF1164	0.47	-0.3
1,170,154	-		GFF1164	0.47	-0.3
1,170,155	+		GFF1164	0.47	+1.0
1,170,163	-		GFF1164	0.48	+0.0
1,170,179	-		GFF1164	0.49	-1.8
1,170,187	+		GFF1164	0.49	+0.2
1,170,187	+		GFF1164	0.49	-0.2
1,170,195	-		GFF1164	0.50	-0.7
1,170,195	-		GFF1164	0.50	-0.1
1,170,205	+		GFF1164	0.50	-0.6
1,170,212	+		GFF1164	0.51	+1.0
1,170,225	+		GFF1164	0.52	+0.8
1,170,225	+		GFF1164	0.52	-0.2
1,170,225	+		GFF1164	0.52	+0.6
1,170,231	-		GFF1164	0.52	-0.6
1,170,233	-		GFF1164	0.52	-0.1
1,170,243	-		GFF1164	0.53	-0.0
1,170,250	-		GFF1164	0.53	-0.3
1,170,250	-		GFF1164	0.53	+1.3
1,170,255	-		GFF1164	0.54	+0.5