Strain Fitness in Sphingobium sp. HT1-2 around GFF4682

Experiment: EMM_noCarbon with Sucrose and Putrescine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Putrescine
4,678,952	-		GFF4681	0.32	+0.6
4,678,963	-		GFF4681	0.33	+1.4
4,678,963	-		GFF4681	0.33	+0.3
4,678,982	+		GFF4681	0.34	+0.3
4,678,982	+		GFF4681	0.34	-0.3
4,678,990	-		GFF4681	0.35	-1.1
4,678,990	-		GFF4681	0.35	+0.4
4,678,992	-		GFF4681	0.35	+0.2
4,679,019	+		GFF4681	0.37	+0.2
4,679,019	+		GFF4681	0.37	-0.2
4,679,019	+		GFF4681	0.37	-0.0
4,679,019	+		GFF4681	0.37	+0.5
4,679,103	+		GFF4681	0.43	-0.3
4,679,153	+		GFF4681	0.46	-0.3
4,679,156	+		GFF4681	0.46	+1.2
4,679,156	+		GFF4681	0.46	+1.9
4,679,156	+		GFF4681	0.46	+1.0
4,679,164	-		GFF4681	0.47	-0.1
4,679,179	+		GFF4681	0.48	-0.5
4,679,179	+		GFF4681	0.48	-1.3
4,679,208	-		GFF4681	0.50	-0.8
4,679,250	-		GFF4681	0.53	+0.2
4,679,271	-		GFF4681	0.54	-0.4
4,679,311	+		GFF4681	0.57	+0.6
4,679,314	-		GFF4681	0.57	+0.9
4,679,353	+		GFF4681	0.60	+2.1
4,679,404	+		GFF4681	0.63	+0.5
4,679,404	+		GFF4681	0.63	-0.3
4,679,404	+		GFF4681	0.63	-0.2
4,679,411	+		GFF4681	0.64	-1.1
4,679,419	-		GFF4681	0.64	-0.4
4,679,428	+		GFF4681	0.65	+0.4
4,679,431	-		GFF4681	0.65	+0.5
4,679,442	+		GFF4681	0.66	-0.1
4,679,471	+		GFF4681	0.68	+0.7
4,679,474	-		GFF4681	0.68	-1.3
4,679,477	+		GFF4681	0.68	-0.1
4,679,482	+		GFF4681	0.69	+1.3
4,679,528	-		GFF4681	0.72	-0.5
4,679,539	+		GFF4681	0.73	-0.5
4,679,584	-		GFF4681	0.76	-1.0
4,679,611	-		GFF4681	0.77	+0.6
4,679,637	+		GFF4681	0.79	+0.2
4,679,637	+		GFF4681	0.79	+1.2
4,679,637	+		GFF4681	0.79	-2.1
4,679,645	-		GFF4681	0.80	+0.4
4,679,647	+		GFF4681	0.80	-0.5
4,679,647	+		GFF4681	0.80	+0.3
4,679,655	-		GFF4681	0.80	+0.8
4,679,655	-		GFF4681	0.80	+0.0
4,679,663	+		GFF4681	0.81	+0.2
4,679,668	+		GFF4681	0.81	+0.8
4,679,668	+		GFF4681	0.81	-1.3
4,679,668	+		GFF4681	0.81	+0.7
4,679,668	+		GFF4681	0.81	-0.1
4,679,674	+		GFF4681	0.82	+0.6
4,679,675	+		GFF4681	0.82	+0.7
4,679,677	-		GFF4681	0.82	+0.8
4,679,684	-		GFF4681	0.82	+0.4
4,679,686	+		GFF4681	0.83	+1.5
4,679,716	-		GFF4681	0.85	+1.3
4,679,716	-		GFF4681	0.85	+0.1
4,679,734	+		GFF4681	0.86	-0.7
4,679,734	+		GFF4681	0.86	-1.3
4,679,734	+		GFF4681	0.86	+1.5
4,679,739	+		GFF4681	0.86	+0.5
4,679,742	-		GFF4681	0.86	-2.1
4,679,749	+		GFF4681	0.87	+0.0
4,679,749	+		GFF4681	0.87	+1.1
4,679,749	+		GFF4681	0.87	+1.4
4,679,782	+		GFF4681	0.89	+0.7
4,679,782	+		GFF4681	0.89	-0.1
4,679,790	-		GFF4681	0.90	+0.8
4,679,790	-		GFF4681	0.90	+1.2
4,679,790	-		GFF4681	0.90	-0.2
4,679,790	-		GFF4681	0.90	-0.4
4,679,790	-		GFF4681	0.90	+0.5
4,679,790	-		GFF4681	0.90	-1.9
4,679,839	+				+0.2
4,679,844	+				-1.5
4,679,860	+				+0.8
4,679,877	+				-0.7
4,679,895	-				-1.3
4,679,914	+				+0.7
4,679,914	+				+0.3
4,679,914	+				-1.7
4,679,914	+				-0.3
4,679,914	+				-0.2
4,679,922	-				-2.1
4,679,922	-				-0.3
4,679,922	-				+1.1
4,679,932	+				+0.4
4,679,933	+				+0.6
4,679,939	+				-1.2
4,679,939	+				+0.5
4,679,941	-				-1.6
4,679,941	-				+1.1
4,679,941	-				+1.8
4,679,941	-				-0.5
4,679,956	+				-0.4
4,679,957	-				-0.9
4,679,964	-				-2.0
4,679,978	+				-0.0
4,679,981	+				+0.6
4,679,984	-				-0.3
4,679,988	-				+1.0
4,679,989	-				+0.7
4,679,991	-				-1.7
4,680,060	+				-0.5
4,680,075	-				+0.3
4,680,079	+				-0.3
4,680,087	-				+1.3
4,680,092	-				+0.4
4,680,122	-				+0.1
4,680,122	-				-2.1
4,680,147	-				+1.8
4,680,165	-				-0.4
4,680,165	-				-1.2
4,680,175	+				+0.2
4,680,196	+		GFF4682	0.11	+0.1
4,680,225	+		GFF4682	0.12	+0.5
4,680,233	-		GFF4682	0.12	+1.5
4,680,233	-		GFF4682	0.12	-0.3
4,680,233	-		GFF4682	0.12	-0.2
4,680,233	-		GFF4682	0.12	+0.7
4,680,252	+		GFF4682	0.13	+0.1
4,680,260	-		GFF4682	0.13	+0.4
4,680,278	+		GFF4682	0.14	+0.4
4,680,281	-		GFF4682	0.14	-0.3
4,680,281	-		GFF4682	0.14	+0.9
4,680,283	+		GFF4682	0.14	+0.7
4,680,283	+		GFF4682	0.14	+0.4
4,680,288	+		GFF4682	0.15	-0.3
4,680,291	-		GFF4682	0.15	-1.3
4,680,293	+		GFF4682	0.15	-1.1
4,680,293	+		GFF4682	0.15	-0.1
4,680,293	+		GFF4682	0.15	+0.2
4,680,293	+		GFF4682	0.15	+0.9
4,680,293	+		GFF4682	0.15	-2.2
4,680,301	-		GFF4682	0.15	+1.3
4,680,301	-		GFF4682	0.15	+0.3
4,680,301	-		GFF4682	0.15	-0.9
4,680,301	-		GFF4682	0.15	-0.0
4,680,303	+		GFF4682	0.15	+1.7
4,680,311	-		GFF4682	0.15	-0.9
4,680,311	-		GFF4682	0.15	+1.2
4,680,316	-		GFF4682	0.16	-1.3
4,680,327	+		GFF4682	0.16	-0.0
4,680,332	+		GFF4682	0.16	-0.0
4,680,335	-		GFF4682	0.16	+0.9
4,680,335	-		GFF4682	0.16	-1.5
4,680,372	+		GFF4682	0.18	-0.9
4,680,372	+		GFF4682	0.18	-0.1
4,680,372	+		GFF4682	0.18	-1.4
4,680,380	-		GFF4682	0.18	-1.3
4,680,385	-		GFF4682	0.19	+0.1
4,680,408	+		GFF4682	0.20	+0.3
4,680,408	+		GFF4682	0.20	-0.8
4,680,408	+		GFF4682	0.20	+0.3
4,680,416	-		GFF4682	0.20	-0.6
4,680,455	-		GFF4682	0.22	+0.3
4,680,457	+		GFF4682	0.22	+0.9
4,680,464	-		GFF4682	0.22	-1.3
4,680,469	+		GFF4682	0.22	+1.8
4,680,471	+		GFF4682	0.22	-0.7
4,680,515	+		GFF4682	0.24	+0.3
4,680,523	+		GFF4682	0.24	-0.7
4,680,535	+		GFF4682	0.25	-1.0
4,680,541	+		GFF4682	0.25	-0.2
4,680,543	-		GFF4682	0.25	-0.7
4,680,545	+		GFF4682	0.25	-1.5
4,680,545	+		GFF4682	0.25	+1.1
4,680,545	+		GFF4682	0.25	+0.1
4,680,545	+		GFF4682	0.25	+1.4
4,680,545	+		GFF4682	0.25	+0.3
4,680,545	+		GFF4682	0.25	+0.8
4,680,545	+		GFF4682	0.25	-0.3
4,680,545	+		GFF4682	0.25	+0.3
4,680,545	+		GFF4682	0.25	-0.3
4,680,553	-		GFF4682	0.26	+2.2
4,680,553	-		GFF4682	0.26	+0.5
4,680,553	-		GFF4682	0.26	+0.2
4,680,553	-		GFF4682	0.26	-0.3
4,680,553	-		GFF4682	0.26	+0.3
4,680,553	-		GFF4682	0.26	+1.5
4,680,615	+		GFF4682	0.28	+0.2
4,680,669	+		GFF4682	0.31	+0.7
4,680,700	+		GFF4682	0.32	+0.3
4,680,725	+		GFF4682	0.33	+1.2
4,680,733	-		GFF4682	0.33	-1.9
4,680,767	-		GFF4682	0.35	+0.2
4,680,767	-		GFF4682	0.35	+1.3
4,680,769	+		GFF4682	0.35	-0.4
4,680,776	+		GFF4682	0.35	-0.2
4,680,777	-		GFF4682	0.35	+0.5
4,680,777	-		GFF4682	0.35	+0.7
4,680,784	-		GFF4682	0.35	-1.3
4,680,821	-		GFF4682	0.37	-1.2
4,680,832	+		GFF4682	0.37	-0.3
4,680,848	+		GFF4682	0.38	+0.4
4,680,868	+		GFF4682	0.39	+0.3
4,680,921	+		GFF4682	0.41	+0.3
4,680,921	+		GFF4682	0.41	+1.7
4,680,929	-		GFF4682	0.41	-0.4
4,680,929	-		GFF4682	0.41	+0.7
4,680,935	+		GFF4682	0.42	+0.4
4,680,963	-		GFF4682	0.43	-1.2
4,680,981	+		GFF4682	0.44	-0.4
4,680,981	+		GFF4682	0.44	+1.3
4,680,986	+		GFF4682	0.44	+0.2
4,681,030	-		GFF4682	0.46	+0.1
4,681,037	-		GFF4682	0.46	-1.4
4,681,048	+		GFF4682	0.46	-0.5
4,681,053	+		GFF4682	0.47	+0.6
4,681,058	+		GFF4682	0.47	-1.8
4,681,061	-		GFF4682	0.47	+1.3
4,681,091	+		GFF4682	0.48	-1.3
4,681,104	+		GFF4682	0.49	-0.6
4,681,120	-		GFF4682	0.49	+0.2
4,681,170	+		GFF4682	0.52	+0.8
4,681,175	+		GFF4682	0.52	-0.8
4,681,175	+		GFF4682	0.52	-1.7
4,681,175	+		GFF4682	0.52	-0.3
4,681,175	+		GFF4682	0.52	-0.2
4,681,182	+		GFF4682	0.52	+0.4
4,681,182	+		GFF4682	0.52	-0.8
4,681,182	+		GFF4682	0.52	-0.0
4,681,183	-		GFF4682	0.52	+1.4
4,681,183	-		GFF4682	0.52	-1.7
4,681,188	-		GFF4682	0.52	+0.8
4,681,190	-		GFF4682	0.52	+0.4
4,681,192	+		GFF4682	0.52	+0.8
4,681,195	-		GFF4682	0.53	+1.1
4,681,200	-		GFF4682	0.53	+1.3
4,681,214	+		GFF4682	0.53	+1.6
4,681,243	+		GFF4682	0.55	-1.0
4,681,250	+		GFF4682	0.55	-0.2
4,681,252	+		GFF4682	0.55	-0.2
4,681,256	+		GFF4682	0.55	+0.1
4,681,264	-		GFF4682	0.55	+0.7
4,681,264	-		GFF4682	0.55	-0.2
4,681,284	+		GFF4682	0.56	-0.0
4,681,284	+		GFF4682	0.56	+0.9
4,681,284	+		GFF4682	0.56	-0.1
4,681,292	-		GFF4682	0.57	-1.2
4,681,315	+		GFF4682	0.58	-0.4
4,681,323	-		GFF4682	0.58	-0.4
4,681,327	-		GFF4682	0.58	-1.8
4,681,365	+		GFF4682	0.60	-0.7
4,681,367	-		GFF4682	0.60	+1.5
4,681,371	-		GFF4682	0.60	+0.3
4,681,373	-		GFF4682	0.60	+1.2
4,681,373	-		GFF4682	0.60	+0.4
4,681,373	-		GFF4682	0.60	+1.1
4,681,373	-		GFF4682	0.60	+1.6
4,681,388	-		GFF4682	0.61	+0.3
4,681,388	-		GFF4682	0.61	+0.1
4,681,388	-		GFF4682	0.61	-1.4
4,681,399	+		GFF4682	0.61	+0.1
4,681,420	+		GFF4682	0.62	-0.8
4,681,420	+		GFF4682	0.62	-1.1
4,681,431	+		GFF4682	0.63	-0.5
4,681,457	+		GFF4682	0.64	-0.6
4,681,465	-		GFF4682	0.64	+0.9
4,681,469	+		GFF4682	0.64	-1.8
4,681,477	-		GFF4682	0.64	-0.1
4,681,504	+		GFF4682	0.66	-1.3
4,681,504	+		GFF4682	0.66	+0.3
4,681,539	+		GFF4682	0.67	+0.3
4,681,539	+		GFF4682	0.67	+0.3
4,681,539	+		GFF4682	0.67	-0.1
4,681,539	+		GFF4682	0.67	+0.3
4,681,539	+		GFF4682	0.67	-0.3
4,681,539	+		GFF4682	0.67	-0.7
4,681,539	+		GFF4682	0.67	+1.1
4,681,544	+		GFF4682	0.67	+1.5
4,681,547	-		GFF4682	0.67	-0.3
4,681,547	-		GFF4682	0.67	-1.5
4,681,547	-		GFF4682	0.67	-0.5
4,681,547	-		GFF4682	0.67	-1.3
4,681,547	-		GFF4682	0.67	-1.9
4,681,552	-		GFF4682	0.68	+0.1
4,681,552	-		GFF4682	0.68	+0.3
4,681,552	-		GFF4682	0.68	+0.2
4,681,557	-		GFF4682	0.68	-0.1
4,681,557	-		GFF4682	0.68	+0.7
4,681,573	+		GFF4682	0.68	+0.9
4,681,612	+		GFF4682	0.70	-1.7
4,681,612	+		GFF4682	0.70	-0.6
4,681,620	-		GFF4682	0.70	-0.4
4,681,620	-		GFF4682	0.70	+0.8
4,681,620	-		GFF4682	0.70	+0.3
4,681,626	+		GFF4682	0.71	+0.3
4,681,631	+		GFF4682	0.71	+1.2
4,681,639	-		GFF4682	0.71	+0.2
4,681,640	+		GFF4682	0.71	-0.3
4,681,648	-		GFF4682	0.72	+0.2
4,681,669	+		GFF4682	0.73	-1.4
4,681,670	+		GFF4682	0.73	-0.8
4,681,678	-		GFF4682	0.73	-0.9
4,681,678	-		GFF4682	0.73	-1.9
4,681,678	-		GFF4682	0.73	+0.7
4,681,701	+		GFF4682	0.74	+0.2
4,681,709	-		GFF4682	0.74	-0.7
4,681,743	+		GFF4682	0.76	+0.4
4,681,743	+		GFF4682	0.76	+0.9
4,681,743	+		GFF4682	0.76	+0.7
4,681,751	-		GFF4682	0.76	-1.9
4,681,751	-		GFF4682	0.76	-1.6
4,681,751	-		GFF4682	0.76	+0.3
4,681,753	+		GFF4682	0.76	-0.3
4,681,757	-		GFF4682	0.76	-1.0
4,681,757	-		GFF4682	0.76	+0.3
4,681,757	-		GFF4682	0.76	-0.1
4,681,777	-		GFF4682	0.77	+0.3
4,681,787	+		GFF4682	0.77	+0.1
4,681,792	+		GFF4682	0.78	+0.1
4,681,795	-		GFF4682	0.78	+0.6
4,681,825	+		GFF4682	0.79	+0.3
4,681,825	+		GFF4682	0.79	+1.1
4,681,825	+		GFF4682	0.79	+0.9
4,681,825	+		GFF4682	0.79	+0.1
4,681,825	+		GFF4682	0.79	+0.7
4,681,825	+		GFF4682	0.79	+1.7
4,681,827	+		GFF4682	0.79	-0.8
4,681,827	+		GFF4682	0.79	+0.2
4,681,827	+		GFF4682	0.79	-0.2
4,681,827	+		GFF4682	0.79	+0.3
4,681,827	+		GFF4682	0.79	+1.2
4,681,827	+		GFF4682	0.79	+0.8
4,681,827	+		GFF4682	0.79	-0.0
4,681,827	+		GFF4682	0.79	-1.2
4,681,827	+		GFF4682	0.79	+1.2
4,681,827	+		GFF4682	0.79	+0.0
4,681,827	+		GFF4682	0.79	+0.9
4,681,833	-		GFF4682	0.79	+0.7
4,681,835	-		GFF4682	0.79	+0.4
4,681,835	-		GFF4682	0.79	+0.4
4,681,835	-		GFF4682	0.79	-1.7
4,681,835	-		GFF4682	0.79	-1.7
4,681,835	-		GFF4682	0.79	+0.3
4,681,835	-		GFF4682	0.79	+0.1
4,681,835	-		GFF4682	0.79	-1.8
4,681,835	-		GFF4682	0.79	+0.2
4,681,835	-		GFF4682	0.79	-0.4
4,681,835	-		GFF4682	0.79	+0.1
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