Strain Fitness in Sphingobium sp. HT1-2 around GFF4371

Experiment: EMM_noCarbon with Sucrose and Putrescine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Putrescine
4,370,036	-		GFF4370	0.81	+1.2
4,370,046	-		GFF4370	0.81	-1.7
4,370,087	-		GFF4370	0.83	+0.2
4,370,109	+		GFF4370	0.84	-0.6
4,370,109	+		GFF4370	0.84	+0.3
4,370,109	+		GFF4370	0.84	+1.7
4,370,117	-		GFF4370	0.85	-2.1
4,370,117	-		GFF4370	0.85	+0.6
4,370,133	-		GFF4370	0.86	-1.3
4,370,141	-		GFF4370	0.86	-1.9
4,370,150	-		GFF4370	0.86	+0.1
4,370,150	-		GFF4370	0.86	+0.6
4,370,155	+		GFF4370	0.87	+0.9
4,370,157	+		GFF4370	0.87	+0.9
4,370,164	+		GFF4370	0.87	-0.4
4,370,169	+		GFF4370	0.87	+0.6
4,370,174	+		GFF4370	0.88	-2.0
4,370,177	-		GFF4370	0.88	+0.9
4,370,177	-		GFF4370	0.88	+1.0
4,370,179	+		GFF4370	0.88	-0.2
4,370,187	-		GFF4370	0.88	-2.0
4,370,187	-		GFF4370	0.88	+1.1
4,370,187	-		GFF4370	0.88	+0.5
4,370,194	-		GFF4370	0.89	-3.2
4,370,200	+		GFF4370	0.89	-0.1
4,370,201	-		GFF4370	0.89	-0.4
4,370,201	-		GFF4370	0.89	-1.8
4,370,210	-		GFF4370	0.89	+0.1
4,370,221	+		GFF4370	0.90	-0.7
4,370,223	+				+0.3
4,370,225	+				-0.7
4,370,225	+				-0.7
4,370,229	-				-1.2
4,370,231	-				-0.4
4,370,253	-				-0.0
4,370,253	-				+0.2
4,370,255	+				-1.8
4,370,266	+				+0.7
4,370,269	+				-0.5
4,370,272	-				+0.5
4,370,274	-				+0.0
4,370,277	-				+0.3
4,370,283	+				+1.2
4,370,288	+				+0.2
4,370,290	-				-0.4
4,370,293	+				+0.1
4,370,296	-				-2.0
4,370,296	-				+1.1
4,370,298	+				-0.7
4,370,298	+				-0.8
4,370,306	-				+0.4
4,370,324	-				-0.6
4,370,324	-				-1.0
4,370,339	-				+0.3
4,370,339	-				-0.9
4,370,344	-				-0.3
4,370,345	+				-0.9
4,370,345	+				+0.8
4,370,345	+				-0.4
4,370,348	-				-0.6
4,370,353	-				-0.1
4,370,372	-				-0.1
4,370,374	-				+0.6
4,370,383	+				+0.2
4,370,394	+				-0.8
4,370,402	+				-0.9
4,370,402	-				+0.3
4,370,402	-				-0.0
4,370,402	-				-0.7
4,370,406	+				-0.0
4,370,419	-				-0.2
4,370,424	-				+1.2
4,370,424	-				-0.3
4,370,424	-				-0.4
4,370,443	+				-0.1
4,370,443	+				-0.2
4,370,451	-				-1.9
4,370,474	+				-0.3
4,370,498	+				-1.1
4,370,499	-				-0.3
4,370,501	-				-1.2
4,370,506	-				+0.4
4,370,519	+				-1.3
4,370,520	+				+0.8
4,370,528	-				+0.9
4,370,528	-				-0.2
4,370,529	-				+0.1
4,370,530	+				+0.1
4,370,537	+				+0.1
4,370,538	-				+0.5
4,370,549	+				+0.2
4,370,554	+				-0.3
4,370,554	+				-1.0
4,370,559	+				+0.3
4,370,562	-				+0.1
4,370,562	-				-2.3
4,370,562	-				-0.1
4,370,567	-				-1.6
4,370,579	+				-0.3
4,370,597	-				-1.0
4,370,598	-				-0.8
4,370,603	+				+0.0
4,370,604	-				+0.3
4,370,604	-				-0.7
4,370,604	-				-0.3
4,370,606	-				+0.0
4,370,611	-				+0.6
4,370,617	+				-1.9
4,370,638	+				+1.0
4,370,641	-				-1.0
4,370,642	-				-1.4
4,370,653	-				-1.8
4,370,669	+				+1.3
4,370,669	+				-0.4
4,370,674	+				-0.4
4,370,677	-				+0.1
4,370,677	-				+0.4
4,370,677	-				+1.0
4,370,682	-				+0.4
4,370,682	-				-0.8
4,370,682	-				+0.3
4,370,682	-				-0.3
4,370,683	-				-0.6
4,370,694	+				-0.9
4,370,701	-				+0.1
4,370,715	+				+0.3
4,370,727	-				-0.1
4,370,743	+				-0.2
4,370,743	+				-1.4
4,370,743	+				-0.1
4,370,743	+				+0.1
4,370,743	+				+0.9
4,370,743	+				-1.1
4,370,743	+				-2.1
4,370,743	+				-0.3
4,370,751	-				+0.2
4,370,751	-				+1.1
4,370,751	-				-1.3
4,370,751	-				-0.9
4,370,776	-				+0.1
4,370,791	+				-0.7
4,370,791	+				-1.1
4,370,812	+				-0.7
4,370,817	+				+0.7
4,370,826	+				-0.3
4,370,893	+				-0.0
4,370,893	+				-0.8
4,370,893	+				+1.0
4,370,893	+				+0.2
4,370,893	+				+0.1
4,370,893	+				-1.6
4,370,896	-				+0.7
4,370,901	-				+0.9
4,370,901	-				+0.2
4,370,901	-				-1.7
4,370,901	-				-1.5
4,370,901	-				+0.6
4,370,901	-				-0.2
4,370,903	+				-2.1
4,370,903	+				+0.3
4,370,906	-				-0.4
4,370,906	-				+0.3
4,370,924	+				-0.1
4,370,938	+				+0.5
4,370,938	-				+0.6
4,370,946	-				-0.9
4,370,949	+				-1.0
4,370,983	+				-0.9
4,370,988	-				-1.6
4,371,001	-				-0.8
4,371,001	-				-0.3
4,371,011	-				-0.6
4,371,023	+				+0.2
4,371,028	+				-0.6
4,371,034	+				-0.5
4,371,034	+				+0.5
4,371,034	+				+0.1
4,371,034	+				+0.9
4,371,034	+				-0.4
4,371,034	+				-0.4
4,371,036	-				+0.4
4,371,042	-				-1.9
4,371,042	-				-0.6
4,371,042	-				-1.1
4,371,042	-				+0.5
4,371,042	-				-0.5
4,371,042	-				-0.4
4,371,042	-				-0.7
4,371,042	-				-1.7
4,371,042	-				-0.3
4,371,044	+				-0.3
4,371,055	+				-0.4
4,371,062	-				-1.3
4,371,071	+				-2.1
4,371,091	-				-2.1
4,371,093	-				+0.1
4,371,094	+				+0.7
4,371,094	+				-1.2
4,371,094	+				-0.6
4,371,094	+				+0.2
4,371,101	-				-1.9
4,371,102	-				-2.6
4,371,116	+				+0.1
4,371,123	+				+0.6
4,371,123	+				-0.9
4,371,124	-				+0.9
4,371,129	-				-0.9
4,371,131	-				+0.3
4,371,131	-				-1.3
4,371,131	-				+1.0
4,371,131	-				+0.0
4,371,131	-				-0.1
4,371,152	-				+0.0
4,371,171	-				-0.5
4,371,171	-				+1.4
4,371,171	-				-0.6
4,371,175	+				+0.3
4,371,186	-				+1.0
4,371,186	-				+0.1
4,371,188	+				-0.2
4,371,188	+				-0.8
4,371,235	-		GFF4371	0.11	-0.4
4,371,235	-		GFF4371	0.11	-1.4
4,371,237	-		GFF4371	0.11	-0.1
4,371,242	+		GFF4371	0.11	+0.1
4,371,247	+		GFF4371	0.12	-0.9
4,371,247	+		GFF4371	0.12	+0.2
4,371,247	+		GFF4371	0.12	-0.3
4,371,250	-		GFF4371	0.12	-0.1
4,371,252	+		GFF4371	0.12	+0.1
4,371,252	+		GFF4371	0.12	-0.1
4,371,252	+		GFF4371	0.12	+0.6
4,371,252	+		GFF4371	0.12	-0.2
4,371,252	+		GFF4371	0.12	-1.3
4,371,255	-		GFF4371	0.12	-0.4
4,371,255	-		GFF4371	0.12	-1.6
4,371,255	-		GFF4371	0.12	-2.1
4,371,260	-		GFF4371	0.12	+0.8
4,371,260	-		GFF4371	0.12	-2.0
4,371,260	-		GFF4371	0.12	-0.6
4,371,260	-		GFF4371	0.12	+0.4
4,371,267	-		GFF4371	0.13	-0.9
4,371,286	+		GFF4371	0.14	-0.1
4,371,286	+		GFF4371	0.14	+0.1
4,371,286	+		GFF4371	0.14	+1.7
4,371,294	-		GFF4371	0.14	-0.3
4,371,309	-		GFF4371	0.15	+0.6
4,371,329	-		GFF4371	0.16	-2.6
4,371,334	-		GFF4371	0.16	-2.0
4,371,343	+		GFF4371	0.17	+0.3
4,371,348	+		GFF4371	0.17	-1.8
4,371,352	+		GFF4371	0.17	-0.3
4,371,360	-		GFF4371	0.18	-0.5
4,371,366	-		GFF4371	0.18	-0.3
4,371,370	+		GFF4371	0.18	-1.6
4,371,373	+		GFF4371	0.19	-1.7
4,371,376	+		GFF4371	0.19	-1.7
4,371,376	+		GFF4371	0.19	+1.5
4,371,384	-		GFF4371	0.19	+0.8
4,371,384	-		GFF4371	0.19	-0.1
4,371,384	-		GFF4371	0.19	-1.0
4,371,396	-		GFF4371	0.20	-1.7
4,371,405	+		GFF4371	0.20	-1.7
4,371,420	+		GFF4371	0.21	+0.4
4,371,420	+		GFF4371	0.21	-0.3
4,371,420	+		GFF4371	0.21	-1.0
4,371,428	-		GFF4371	0.21	-0.1
4,371,431	+		GFF4371	0.22	-0.6
4,371,439	+		GFF4371	0.22	-0.8
4,371,439	+		GFF4371	0.22	+0.8
4,371,454	+		GFF4371	0.23	-0.0
4,371,454	+		GFF4371	0.23	+0.2
4,371,454	+		GFF4371	0.23	-0.4
4,371,454	+		GFF4371	0.23	+0.2
4,371,460	+		GFF4371	0.23	-0.9
4,371,462	-		GFF4371	0.23	-0.0
4,371,462	-		GFF4371	0.23	-1.4
4,371,462	-		GFF4371	0.23	-0.3
4,371,468	-		GFF4371	0.24	+0.1
4,371,469	+		GFF4371	0.24	-2.3
4,371,469	+		GFF4371	0.24	-0.6
4,371,470	+		GFF4371	0.24	-0.3
4,371,480	+		GFF4371	0.24	-0.2
4,371,487	-		GFF4371	0.25	+0.1
4,371,492	+		GFF4371	0.25	+0.8
4,371,516	-		GFF4371	0.26	-0.6
4,371,542	+		GFF4371	0.28	+1.0
4,371,542	+		GFF4371	0.28	-2.3
4,371,542	+		GFF4371	0.28	+0.2
4,371,542	+		GFF4371	0.28	+0.6
4,371,542	+		GFF4371	0.28	+0.4
4,371,542	+		GFF4371	0.28	+1.4
4,371,550	-		GFF4371	0.28	-2.0
4,371,550	-		GFF4371	0.28	-0.6
4,371,550	-		GFF4371	0.28	-1.7
4,371,550	-		GFF4371	0.28	-0.1
4,371,600	-		GFF4371	0.31	-1.7
4,371,612	-		GFF4371	0.31	+0.6
4,371,618	+		GFF4371	0.32	-0.7
4,371,618	+		GFF4371	0.32	-1.6
4,371,628	+		GFF4371	0.32	-0.7
4,371,651	+		GFF4371	0.33	-0.4
4,371,652	-		GFF4371	0.34	-0.0
4,371,652	-		GFF4371	0.34	+0.8
4,371,652	-		GFF4371	0.34	-1.3
4,371,662	-		GFF4371	0.34	-0.9
4,371,666	+		GFF4371	0.34	+0.3
4,371,666	+		GFF4371	0.34	+0.1
4,371,669	-		GFF4371	0.34	+0.3
4,371,671	+		GFF4371	0.35	-0.5
4,371,672	-		GFF4371	0.35	-0.7
4,371,694	+		GFF4371	0.36	+1.3
4,371,694	+		GFF4371	0.36	-1.9
4,371,702	-		GFF4371	0.36	-3.1
4,371,702	-		GFF4371	0.36	+1.1
4,371,707	-		GFF4371	0.37	-1.2
4,371,720	+		GFF4371	0.37	-0.3
4,371,725	-		GFF4371	0.37	-0.5
4,371,750	-		GFF4371	0.39	-0.3
4,371,751	+		GFF4371	0.39	+1.3
4,371,751	+		GFF4371	0.39	-0.6
4,371,751	+		GFF4371	0.39	+0.3
4,371,752	+		GFF4371	0.39	-0.3
4,371,759	-		GFF4371	0.39	+0.3
4,371,759	-		GFF4371	0.39	-0.3
4,371,760	-		GFF4371	0.39	+0.2
4,371,775	+		GFF4371	0.40	-1.2
4,371,779	+		GFF4371	0.40	+0.2
4,371,786	-		GFF4371	0.41	-0.4
4,371,786	-		GFF4371	0.41	-0.3
4,371,787	-		GFF4371	0.41	+0.7
4,371,797	+		GFF4371	0.41	-0.0
4,371,803	-		GFF4371	0.42	+1.7
4,371,806	-		GFF4371	0.42	+0.4
4,371,829	+		GFF4371	0.43	-0.4
4,371,829	+		GFF4371	0.43	-3.4
4,371,829	+		GFF4371	0.43	+0.8
4,371,829	+		GFF4371	0.43	-2.2
4,371,829	+		GFF4371	0.43	+0.3
4,371,829	+		GFF4371	0.43	+0.3
4,371,829	+		GFF4371	0.43	-2.5
4,371,829	+		GFF4371	0.43	-1.2
4,371,829	+		GFF4371	0.43	+0.6
4,371,829	+		GFF4371	0.43	+0.2
4,371,830	-		GFF4371	0.43	-0.4
4,371,836	+		GFF4371	0.43	-0.5
4,371,837	-		GFF4371	0.44	-2.1
4,371,837	-		GFF4371	0.44	-2.3
4,371,837	-		GFF4371	0.44	-0.1
4,371,837	-		GFF4371	0.44	-2.3
4,371,842	-		GFF4371	0.44	-0.4
4,371,850	+		GFF4371	0.44	+1.9
4,371,850	+		GFF4371	0.44	-0.9
4,371,850	+		GFF4371	0.44	-0.9
4,371,858	-		GFF4371	0.45	-0.2
4,371,870	+		GFF4371	0.45	+0.5
4,371,878	-		GFF4371	0.46	+0.3
4,371,886	+		GFF4371	0.46	+0.1
4,371,886	+		GFF4371	0.46	+1.9
4,371,894	-		GFF4371	0.47	-1.7
4,371,899	-		GFF4371	0.47	-0.2
4,371,903	+		GFF4371	0.47	-2.0
4,371,913	+		GFF4371	0.48	-1.0
4,371,913	+		GFF4371	0.48	-0.8
4,371,919	+		GFF4371	0.48	-1.0
4,371,919	+		GFF4371	0.48	+0.6
4,371,921	-		GFF4371	0.48	-0.3
4,371,924	+		GFF4371	0.48	-1.7
4,371,924	+		GFF4371	0.48	+0.0
4,371,927	-		GFF4371	0.48	-0.7
4,371,939	+		GFF4371	0.49	-1.6
4,371,939	+		GFF4371	0.49	-0.0
4,371,939	+		GFF4371	0.49	-0.4
4,371,945	-		GFF4371	0.49	+0.1
4,371,947	-		GFF4371	0.49	-0.5
4,371,947	-		GFF4371	0.49	+0.7
4,371,947	-		GFF4371	0.49	-0.7
4,371,947	-		GFF4371	0.49	+0.6
4,372,007	+		GFF4371	0.53	+1.4
4,372,015	-		GFF4371	0.53	-2.1
4,372,015	-		GFF4371	0.53	+0.7
4,372,015	-		GFF4371	0.53	+0.6
4,372,044	-		GFF4371	0.55	-0.6
4,372,070	+		GFF4371	0.56	-0.3
4,372,083	+		GFF4371	0.57	-2.9
4,372,087	+		GFF4371	0.57	+0.2
4,372,095	-		GFF4371	0.57	-0.9
4,372,095	-		GFF4371	0.57	-1.9
4,372,101	+		GFF4371	0.58	-0.4
4,372,108	-		GFF4371	0.58	-1.6
4,372,114	-		GFF4371	0.58	-0.1
4,372,181	-		GFF4371	0.62	-0.9
4,372,181	-		GFF4371	0.62	-2.4
4,372,186	+		GFF4371	0.62	+0.3
4,372,189	-		GFF4371	0.62	-0.4
4,372,196	+		GFF4371	0.63	-0.5
4,372,206	+		GFF4371	0.63	-1.3
4,372,223	+		GFF4371	0.64	+0.1
4,372,243	+		GFF4371	0.65	+0.7
4,372,251	-		GFF4371	0.66	-1.1
4,372,267	-		GFF4371	0.67	+0.4
4,372,276	-		GFF4371	0.67	+0.8
4,372,279	+		GFF4371	0.67	-1.0
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