Strain Fitness in Sphingobium sp. HT1-2 around GFF2793

Experiment: EMM_noCarbon with Sucrose and Putrescine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Putrescine
2,826,686	+		GFF2792	0.17	-0.2
2,826,686	+		GFF2792	0.17	-0.7
2,826,694	+		GFF2792	0.18	-1.7
2,826,694	+		GFF2792	0.18	-1.1
2,826,694	+		GFF2792	0.18	+0.4
2,826,694	-		GFF2792	0.18	-1.7
2,826,694	-		GFF2792	0.18	+0.3
2,826,699	+		GFF2792	0.18	-1.5
2,826,702	-		GFF2792	0.18	-2.4
2,826,702	-		GFF2792	0.18	-1.3
2,826,702	-		GFF2792	0.18	-2.2
2,826,702	-		GFF2792	0.18	-2.1
2,826,704	+		GFF2792	0.18	-1.3
2,826,704	+		GFF2792	0.18	-0.2
2,826,707	-		GFF2792	0.19	-0.2
2,826,707	-		GFF2792	0.19	-0.7
2,826,712	-		GFF2792	0.19	+0.2
2,826,746	+		GFF2792	0.22	-1.4
2,826,782	+		GFF2792	0.25	-1.3
2,826,789	-		GFF2792	0.26	+0.5
2,826,790	-		GFF2792	0.26	-0.2
2,826,791	+		GFF2792	0.26	-0.5
2,826,819	-		GFF2792	0.28	-1.9
2,826,819	-		GFF2792	0.28	-1.6
2,826,821	+		GFF2792	0.29	-1.1
2,826,829	-		GFF2792	0.29	-0.7
2,826,829	-		GFF2792	0.29	-1.6
2,826,829	-		GFF2792	0.29	-1.4
2,826,840	+		GFF2792	0.30	+0.7
2,826,886	-		GFF2792	0.34	+0.1
2,826,931	+		GFF2792	0.38	-0.7
2,826,936	+		GFF2792	0.39	+0.5
2,826,936	+		GFF2792	0.39	-0.1
2,826,939	-		GFF2792	0.39	-1.2
2,826,939	-		GFF2792	0.39	+0.2
2,826,939	-		GFF2792	0.39	-0.8
2,826,939	-		GFF2792	0.39	-0.5
2,826,952	+		GFF2792	0.40	-2.8
2,827,025	+		GFF2792	0.46	-0.2
2,827,025	-		GFF2792	0.46	-0.9
2,827,028	-		GFF2792	0.47	-2.1
2,827,039	+		GFF2792	0.48	-0.5
2,827,041	+		GFF2792	0.48	-0.3
2,827,049	-		GFF2792	0.48	-0.1
2,827,049	-		GFF2792	0.48	-1.9
2,827,049	-		GFF2792	0.48	-1.2
2,827,049	-		GFF2792	0.48	-1.2
2,827,049	-		GFF2792	0.48	-1.2
2,827,108	+		GFF2792	0.54	-1.8
2,827,115	+		GFF2792	0.54	-0.9
2,827,147	+		GFF2792	0.57	+0.1
2,827,147	+		GFF2792	0.57	-0.6
2,827,179	+		GFF2792	0.60	-2.6
2,827,181	+		GFF2792	0.60	-1.6
2,827,189	-		GFF2792	0.61	-1.1
2,827,189	-		GFF2792	0.61	-0.9
2,827,197	-		GFF2792	0.61	-2.3
2,827,215	+		GFF2792	0.63	-2.1
2,827,215	+		GFF2792	0.63	-1.9
2,827,215	+		GFF2792	0.63	-1.4
2,827,215	+		GFF2792	0.63	-0.1
2,827,215	+		GFF2792	0.63	+0.3
2,827,215	+		GFF2792	0.63	+0.8
2,827,215	+		GFF2792	0.63	-0.5
2,827,215	+		GFF2792	0.63	-0.6
2,827,215	+		GFF2792	0.63	+0.7
2,827,223	-		GFF2792	0.64	-1.4
2,827,223	-		GFF2792	0.64	-0.6
2,827,223	-		GFF2792	0.64	-0.4
2,827,223	-		GFF2792	0.64	-2.1
2,827,223	-		GFF2792	0.64	+1.0
2,827,223	-		GFF2792	0.64	-1.1
2,827,223	-		GFF2792	0.64	-0.0
2,827,223	-		GFF2792	0.64	-0.8
2,827,241	-		GFF2792	0.65	-0.9
2,827,241	-		GFF2792	0.65	-0.1
2,827,252	+		GFF2792	0.66	-2.0
2,827,252	+		GFF2792	0.66	-1.7
2,827,262	+		GFF2792	0.67	-1.7
2,827,262	+		GFF2792	0.67	-1.6
2,827,262	+		GFF2792	0.67	-1.7
2,827,270	-		GFF2792	0.68	-2.1
2,827,315	+		GFF2792	0.72	-2.7
2,827,350	-		GFF2792	0.75	-1.5
2,827,351	-		GFF2792	0.75	-2.7
2,827,384	-		GFF2792	0.78	+0.3
2,827,394	+		GFF2792	0.78	-0.3
2,827,394	+		GFF2792	0.78	-0.1
2,827,394	+		GFF2792	0.78	-1.6
2,827,394	+		GFF2792	0.78	-2.3
2,827,394	+		GFF2792	0.78	+0.6
2,827,394	+		GFF2792	0.78	+1.3
2,827,394	+		GFF2792	0.78	-0.0
2,827,394	+		GFF2792	0.78	-1.1
2,827,394	+		GFF2792	0.78	-1.2
2,827,402	-		GFF2792	0.79	-0.9
2,827,402	-		GFF2792	0.79	-2.3
2,827,402	-		GFF2792	0.79	-1.1
2,827,402	-		GFF2792	0.79	-0.0
2,827,402	-		GFF2792	0.79	+0.3
2,827,402	-		GFF2792	0.79	-1.2
2,827,402	-		GFF2792	0.79	-0.5
2,827,402	-		GFF2792	0.79	-1.4
2,827,402	-		GFF2792	0.79	+0.2
2,827,410	+		GFF2792	0.80	-1.4
2,827,420	+		GFF2792	0.81	-0.3
2,827,433	+		GFF2792	0.82	+1.4
2,827,437	-		GFF2792	0.82	+0.1
2,827,441	+		GFF2792	0.82	+1.6
2,827,461	+		GFF2792	0.84	-1.5
2,827,466	+		GFF2792	0.85	-2.3
2,827,485	+		GFF2792	0.86	-2.7
2,827,485	+		GFF2792	0.86	+1.8
2,827,488	-		GFF2792	0.87	-0.1
2,827,493	-		GFF2792	0.87	-0.6
2,827,493	-		GFF2792	0.87	+0.7
2,827,498	+		GFF2792	0.87	-1.9
2,827,498	-		GFF2792	0.87	-0.7
2,827,512	-		GFF2792	0.89	+0.5
2,827,517	-		GFF2792	0.89	-1.6
2,827,517	-		GFF2792	0.89	-0.6
2,827,517	-		GFF2792	0.89	-2.5
2,827,524	+		GFF2792	0.90	+0.3
2,827,524	+		GFF2792	0.90	-1.0
2,827,542	+				-1.2
2,827,580	-				-2.1
2,827,598	-				-1.6
2,827,611	+				-2.0
2,827,612	+				-1.6
2,827,612	+				-1.1
2,827,612	+				+1.6
2,827,617	+				-0.6
2,827,619	+				+0.3
2,827,619	-				-0.8
2,827,620	-				-0.1
2,827,625	-				-2.5
2,827,625	-				-0.6
2,827,632	-				-2.2
2,827,679	-				-0.9
2,827,699	+				-1.0
2,827,699	+				-0.0
2,827,704	+				+0.1
2,827,737	+				-2.1
2,827,745	-				-0.1
2,827,745	-				-2.6
2,827,767	-				-1.9
2,827,782	+				-0.6
2,827,786	-				+1.8
2,827,806	-				-0.5
2,827,807	+				+0.5
2,827,815	-				+0.6
2,827,815	-				-0.2
2,827,825	-		GFF2793	0.11	-1.4
2,827,830	+		GFF2793	0.11	-0.8
2,827,830	+		GFF2793	0.11	-0.6
2,827,837	+		GFF2793	0.12	+1.0
2,827,838	-		GFF2793	0.12	-1.0
2,827,838	-		GFF2793	0.12	+0.6
2,827,838	-		GFF2793	0.12	-1.3
2,827,838	-		GFF2793	0.12	-0.9
2,827,838	-		GFF2793	0.12	-0.4
2,827,838	-		GFF2793	0.12	+0.5
2,827,838	-		GFF2793	0.12	+0.1
2,827,838	-		GFF2793	0.12	-0.3
2,827,838	-		GFF2793	0.12	+0.1
2,827,838	-		GFF2793	0.12	-0.7
2,827,838	-		GFF2793	0.12	-1.0
2,827,839	+		GFF2793	0.12	-1.2
2,827,847	-		GFF2793	0.12	+0.9
2,827,848	-		GFF2793	0.13	+0.1
2,827,850	-		GFF2793	0.13	-1.2
2,827,852	+		GFF2793	0.13	-0.3
2,827,860	-		GFF2793	0.13	+0.3
2,827,861	+		GFF2793	0.14	-0.4
2,827,861	+		GFF2793	0.14	+1.6
2,827,871	-		GFF2793	0.14	+0.3
2,827,883	+		GFF2793	0.15	-0.2
2,827,890	+		GFF2793	0.16	+1.0
2,827,890	+		GFF2793	0.16	+0.6
2,827,890	+		GFF2793	0.16	-0.5
2,827,890	+		GFF2793	0.16	-1.1
2,827,898	-		GFF2793	0.16	-2.1
2,827,916	-		GFF2793	0.18	+0.3
2,827,937	-		GFF2793	0.19	+0.4
2,827,937	-		GFF2793	0.19	-0.2
2,827,977	-		GFF2793	0.22	-1.2
2,827,983	-		GFF2793	0.23	-1.3
2,827,994	+		GFF2793	0.24	-1.4
2,827,994	-		GFF2793	0.24	+0.5
2,828,001	+		GFF2793	0.24	-0.4
2,828,001	+		GFF2793	0.24	-2.0
2,828,001	+		GFF2793	0.24	-0.3
2,828,001	+		GFF2793	0.24	+0.4
2,828,006	+		GFF2793	0.25	-1.0
2,828,006	+		GFF2793	0.25	-0.7
2,828,009	-		GFF2793	0.25	+1.3
2,828,009	-		GFF2793	0.25	+0.7
2,828,009	-		GFF2793	0.25	+0.5
2,828,012	-		GFF2793	0.25	-1.4
2,828,014	-		GFF2793	0.25	+0.1
2,828,014	-		GFF2793	0.25	-2.7
2,828,019	-		GFF2793	0.26	-0.5
2,828,020	-		GFF2793	0.26	+0.3
2,828,022	+		GFF2793	0.26	+0.3
2,828,030	-		GFF2793	0.26	-0.4
2,828,045	+		GFF2793	0.28	-0.7
2,828,045	+		GFF2793	0.28	-1.3
2,828,053	-		GFF2793	0.28	-1.2
2,828,053	-		GFF2793	0.28	+1.4
2,828,060	+		GFF2793	0.29	-0.4
2,828,060	+		GFF2793	0.29	-1.1
2,828,060	+		GFF2793	0.29	-0.2
2,828,068	+		GFF2793	0.29	-0.5
2,828,068	+		GFF2793	0.29	-0.7
2,828,068	-		GFF2793	0.29	-0.5
2,828,068	-		GFF2793	0.29	-0.1
2,828,068	-		GFF2793	0.29	-1.1
2,828,068	-		GFF2793	0.29	+0.0
2,828,068	-		GFF2793	0.29	-1.4
2,828,081	-		GFF2793	0.30	+0.1
2,828,090	+		GFF2793	0.31	-1.2
2,828,132	+		GFF2793	0.34	-1.9
2,828,138	-		GFF2793	0.35	-0.4
2,828,186	+		GFF2793	0.38	-1.9
2,828,194	-		GFF2793	0.39	-0.6
2,828,194	-		GFF2793	0.39	-0.2
2,828,203	-		GFF2793	0.40	+0.4
2,828,204	-		GFF2793	0.40	-1.0
2,828,231	+		GFF2793	0.42	-2.1
2,828,231	+		GFF2793	0.42	+0.1
2,828,257	-		GFF2793	0.44	-0.5
2,828,269	+		GFF2793	0.45	-0.1
2,828,292	-		GFF2793	0.47	-0.6
2,828,292	-		GFF2793	0.47	-1.4
2,828,297	-		GFF2793	0.47	-0.3
2,828,297	-		GFF2793	0.47	-1.7
2,828,299	+		GFF2793	0.47	-0.6
2,828,311	+		GFF2793	0.48	-1.6
2,828,311	+		GFF2793	0.48	+0.5
2,828,316	+		GFF2793	0.48	-1.5
2,828,319	-		GFF2793	0.49	-2.2
2,828,319	-		GFF2793	0.49	+1.0
2,828,319	-		GFF2793	0.49	+1.5
2,828,319	-		GFF2793	0.49	-1.9
2,828,321	+		GFF2793	0.49	-1.9
2,828,321	+		GFF2793	0.49	-0.6
2,828,329	-		GFF2793	0.49	-0.1
2,828,329	-		GFF2793	0.49	-0.9
2,828,330	+		GFF2793	0.50	-0.6
2,828,333	-		GFF2793	0.50	-0.9
2,828,338	-		GFF2793	0.50	-1.7
2,828,338	-		GFF2793	0.50	-0.9
2,828,339	-		GFF2793	0.50	+0.3
2,828,340	-		GFF2793	0.50	-0.1
2,828,355	+		GFF2793	0.51	+0.1
2,828,356	+		GFF2793	0.52	+0.3
2,828,363	-		GFF2793	0.52	+1.5
2,828,364	-		GFF2793	0.52	-0.5
2,828,384	+		GFF2793	0.54	-0.9
2,828,387	-		GFF2793	0.54	-0.4
2,828,389	-		GFF2793	0.54	-0.0
2,828,413	+		GFF2793	0.56	-0.6
2,828,434	+		GFF2793	0.58	-1.6
2,828,456	-		GFF2793	0.59	-0.3
2,828,457	-		GFF2793	0.59	-1.4
2,828,459	+		GFF2793	0.59	+0.4
2,828,465	+		GFF2793	0.60	+1.0
2,828,485	+		GFF2793	0.61	+0.7
2,828,490	+		GFF2793	0.62	-0.4
2,828,490	+		GFF2793	0.62	-0.4
2,828,490	+		GFF2793	0.62	+0.6
2,828,490	+		GFF2793	0.62	-0.2
2,828,498	-		GFF2793	0.62	-1.4
2,828,498	-		GFF2793	0.62	+0.5
2,828,498	-		GFF2793	0.62	+0.8
2,828,498	-		GFF2793	0.62	-0.0
2,828,498	-		GFF2793	0.62	-0.6
2,828,498	-		GFF2793	0.62	+0.9
2,828,498	-		GFF2793	0.62	-2.1
2,828,498	-		GFF2793	0.62	-1.0
2,828,498	-		GFF2793	0.62	-0.1
2,828,498	-		GFF2793	0.62	-1.2
2,828,520	-		GFF2793	0.64	+0.3
2,828,522	+		GFF2793	0.64	+0.1
2,828,523	+		GFF2793	0.64	+0.3
2,828,523	+		GFF2793	0.64	+0.4
2,828,523	-		GFF2793	0.64	-0.8
2,828,531	-		GFF2793	0.65	-0.5
2,828,553	-		GFF2793	0.67	+0.4
2,828,553	-		GFF2793	0.67	-1.1
2,828,558	+		GFF2793	0.67	-0.5
2,828,571	+		GFF2793	0.68	-1.2
2,828,573	+		GFF2793	0.68	+0.8
2,828,576	+		GFF2793	0.68	+1.4
2,828,582	-		GFF2793	0.69	-0.2
2,828,584	-		GFF2793	0.69	-0.6
2,828,607	+		GFF2793	0.71	-1.9
2,828,607	+		GFF2793	0.71	+0.8
2,828,615	-		GFF2793	0.71	-0.4
2,828,615	-		GFF2793	0.71	-2.6
2,828,615	-		GFF2793	0.71	+0.5
2,828,705	-		GFF2793	0.78	+0.2
2,828,707	+		GFF2793	0.78	+0.1
2,828,707	+		GFF2793	0.78	-0.2
2,828,713	+		GFF2793	0.79	-0.9
2,828,715	-		GFF2793	0.79	+0.7
2,828,718	-		GFF2793	0.79	-1.0
2,828,721	+		GFF2793	0.80	-2.0
2,828,721	+		GFF2793	0.80	+0.6
2,828,721	-		GFF2793	0.80	+0.4
2,828,721	-		GFF2793	0.80	-0.1
2,828,721	-		GFF2793	0.80	-0.1
2,828,721	-		GFF2793	0.80	+1.1
2,828,726	+		GFF2793	0.80	+1.5
2,828,729	-		GFF2793	0.80	+0.2
2,828,729	-		GFF2793	0.80	-1.4
2,828,731	+		GFF2793	0.80	-1.1
2,828,731	+		GFF2793	0.80	-0.5
2,828,735	+		GFF2793	0.81	-1.2
2,828,735	+		GFF2793	0.81	-1.0
2,828,735	+		GFF2793	0.81	-0.7
2,828,738	-		GFF2793	0.81	+0.3
2,828,740	+		GFF2793	0.81	-0.7
2,828,742	+		GFF2793	0.81	-0.3
2,828,743	-		GFF2793	0.81	-0.2
2,828,743	-		GFF2793	0.81	-2.6
2,828,743	-		GFF2793	0.81	-1.4
2,828,743	-		GFF2793	0.81	-2.1
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