Strain Fitness in Sphingobium sp. HT1-2 around GFF2731

Experiment: EMM_noCarbon with Sucrose and Putrescine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Putrescine
2,753,525	-		GFF2730	0.25	-0.3
2,753,539	+		GFF2730	0.26	-1.8
2,753,547	-		GFF2730	0.27	-0.3
2,753,565	+		GFF2730	0.29	-1.5
2,753,573	-		GFF2730	0.30	+1.0
2,753,573	-		GFF2730	0.30	-0.3
2,753,588	+		GFF2730	0.31	+0.3
2,753,593	+		GFF2730	0.31	+0.5
2,753,596	-		GFF2730	0.32	+0.5
2,753,601	-		GFF2730	0.32	+0.9
2,753,606	-		GFF2730	0.33	-0.3
2,753,606	-		GFF2730	0.33	+0.3
2,753,614	+		GFF2730	0.33	+0.2
2,753,618	+		GFF2730	0.34	+0.5
2,753,618	+		GFF2730	0.34	+0.3
2,753,618	+		GFF2730	0.34	+0.9
2,753,626	-		GFF2730	0.34	+0.8
2,753,627	-		GFF2730	0.35	-0.5
2,753,648	-		GFF2730	0.36	-0.7
2,753,658	+		GFF2730	0.37	-0.5
2,753,670	-		GFF2730	0.39	-0.3
2,753,679	+		GFF2730	0.39	-0.2
2,753,686	+		GFF2730	0.40	-1.3
2,753,694	-		GFF2730	0.41	+1.2
2,753,705	-		GFF2730	0.42	-0.4
2,753,708	-		GFF2730	0.42	-0.5
2,753,723	-		GFF2730	0.43	+1.4
2,753,730	+		GFF2730	0.44	-0.6
2,753,753	+		GFF2730	0.46	+0.3
2,753,755	-		GFF2730	0.46	+0.2
2,753,761	-		GFF2730	0.47	+0.7
2,753,767	+		GFF2730	0.48	+0.4
2,753,775	-		GFF2730	0.48	-0.1
2,753,787	-		GFF2730	0.49	-1.3
2,753,797	-		GFF2730	0.50	-2.2
2,753,821	+		GFF2730	0.53	-0.7
2,753,844	+		GFF2730	0.55	-1.7
2,753,845	-		GFF2730	0.55	-0.1
2,753,850	-		GFF2730	0.55	-0.5
2,753,852	+		GFF2730	0.55	-0.5
2,753,852	+		GFF2730	0.55	+0.1
2,753,852	-		GFF2730	0.55	-0.9
2,753,860	-		GFF2730	0.56	-1.5
2,753,860	-		GFF2730	0.56	+0.7
2,753,870	+		GFF2730	0.57	+0.1
2,753,876	-		GFF2730	0.58	+0.3
2,753,876	-		GFF2730	0.58	-2.6
2,753,876	-		GFF2730	0.58	-1.4
2,753,880	+		GFF2730	0.58	-0.9
2,753,898	+		GFF2730	0.60	-2.7
2,753,898	+		GFF2730	0.60	-0.1
2,753,906	-		GFF2730	0.61	-1.7
2,753,906	-		GFF2730	0.61	-0.3
2,753,906	-		GFF2730	0.61	+0.7
2,753,915	+		GFF2730	0.61	+0.2
2,753,940	+		GFF2730	0.64	+0.6
2,753,945	+		GFF2730	0.64	-0.1
2,753,949	+		GFF2730	0.65	-0.3
2,753,957	-		GFF2730	0.65	-0.7
2,753,959	+		GFF2730	0.65	-0.8
2,753,972	-		GFF2730	0.67	+0.7
2,753,972	-		GFF2730	0.67	-0.7
2,753,977	-		GFF2730	0.67	-1.1
2,753,996	-		GFF2730	0.69	-0.1
2,753,998	-		GFF2730	0.69	+0.2
2,754,014	+		GFF2730	0.71	-3.1
2,754,022	-		GFF2730	0.71	+0.2
2,754,022	-		GFF2730	0.71	-0.2
2,754,033	+		GFF2730	0.72	-0.8
2,754,041	-		GFF2730	0.73	-2.0
2,754,054	+		GFF2730	0.74	-0.9
2,754,077	+		GFF2730	0.76	-2.3
2,754,080	-		GFF2730	0.77	+1.9
2,754,080	-		GFF2730	0.77	-2.1
2,754,088	+		GFF2730	0.77	-1.5
2,754,096	-		GFF2730	0.78	+0.7
2,754,099	+		GFF2730	0.78	+0.6
2,754,102	+		GFF2730	0.79	-1.5
2,754,106	-		GFF2730	0.79	+1.6
2,754,124	+		GFF2730	0.81	-0.2
2,754,124	+		GFF2730	0.81	-0.4
2,754,127	-		GFF2730	0.81	-0.2
2,754,165	+		GFF2730	0.85	+0.1
2,754,171	+		GFF2730	0.85	+0.8
2,754,171	+		GFF2730	0.85	+0.4
2,754,173	-		GFF2730	0.85	-1.3
2,754,174	-		GFF2730	0.85	-0.3
2,754,174	-		GFF2730	0.85	+0.5
2,754,176	+		GFF2730	0.86	-1.7
2,754,176	+		GFF2730	0.86	-0.9
2,754,176	+		GFF2730	0.86	-1.9
2,754,176	+		GFF2730	0.86	+0.5
2,754,176	+		GFF2730	0.86	+1.5
2,754,176	+		GFF2730	0.86	-0.6
2,754,176	+		GFF2730	0.86	-0.3
2,754,176	+		GFF2730	0.86	-0.2
2,754,176	+		GFF2730	0.86	+1.5
2,754,176	+		GFF2730	0.86	+1.2
2,754,176	+		GFF2730	0.86	-0.5
2,754,176	+		GFF2730	0.86	+0.1
2,754,176	+		GFF2730	0.86	+0.4
2,754,176	+		GFF2730	0.86	+0.2
2,754,176	+		GFF2730	0.86	+0.3
2,754,176	+		GFF2730	0.86	-2.5
2,754,176	+		GFF2730	0.86	-0.4
2,754,176	+		GFF2730	0.86	-1.9
2,754,176	+		GFF2730	0.86	-2.5
2,754,176	+		GFF2730	0.86	-0.2
2,754,176	+		GFF2730	0.86	-0.6
2,754,176	+		GFF2730	0.86	-0.8
2,754,176	+		GFF2730	0.86	-2.1
2,754,176	+		GFF2730	0.86	+0.2
2,754,176	+		GFF2730	0.86	+0.1
2,754,176	+		GFF2730	0.86	+0.5
2,754,176	+		GFF2730	0.86	+0.7
2,754,179	-		GFF2730	0.86	+0.1
2,754,181	+		GFF2730	0.86	+0.1
2,754,184	-		GFF2730	0.86	-0.8
2,754,184	-		GFF2730	0.86	-1.2
2,754,184	-		GFF2730	0.86	-1.6
2,754,184	-		GFF2730	0.86	-0.8
2,754,184	-		GFF2730	0.86	-0.8
2,754,184	-		GFF2730	0.86	-1.9
2,754,184	-		GFF2730	0.86	+0.7
2,754,184	-		GFF2730	0.86	-0.4
2,754,184	-		GFF2730	0.86	-2.3
2,754,184	-		GFF2730	0.86	+0.3
2,754,184	-		GFF2730	0.86	-1.6
2,754,184	-		GFF2730	0.86	+0.1
2,754,184	-		GFF2730	0.86	-0.4
2,754,184	-		GFF2730	0.86	-0.4
2,754,184	-		GFF2730	0.86	-0.2
2,754,184	-		GFF2730	0.86	+1.2
2,754,184	-		GFF2730	0.86	-2.1
2,754,184	-		GFF2730	0.86	+1.1
2,754,184	-		GFF2730	0.86	+1.2
2,754,184	-		GFF2730	0.86	+0.0
2,754,184	-		GFF2730	0.86	-1.0
2,754,184	-		GFF2730	0.86	+0.4
2,754,184	-		GFF2730	0.86	-1.1
2,754,184	-		GFF2730	0.86	-0.5
2,754,184	-		GFF2730	0.86	+0.1
2,754,184	-		GFF2730	0.86	+1.1
2,754,184	-		GFF2730	0.86	+0.7
2,754,184	-		GFF2730	0.86	-0.8
2,754,184	-		GFF2730	0.86	-0.2
2,754,184	-		GFF2730	0.86	+0.5
2,754,184	-		GFF2730	0.86	-1.1
2,754,184	-		GFF2730	0.86	+0.3
2,754,198	+		GFF2730	0.88	-0.5
2,754,230	+				-0.3
2,754,236	+				+0.7
2,754,238	-				-2.6
2,754,238	-				+0.5
2,754,241	+				-0.3
2,754,241	+				+0.2
2,754,241	+				-0.8
2,754,244	-				+1.4
2,754,249	-				-0.3
2,754,249	-				-1.7
2,754,253	+				+0.5
2,754,253	+				-0.1
2,754,297	-				+1.2
2,754,322	+				-1.4
2,754,323	+				-0.6
2,754,333	+				-0.4
2,754,335	-				+0.1
2,754,347	-				+0.7
2,754,357	+				-2.2
2,754,367	+				-1.1
2,754,367	+				-0.6
2,754,367	+				+0.2
2,754,367	+				+1.5
2,754,367	+				+0.7
2,754,367	+				-0.7
2,754,367	+				-0.5
2,754,367	+				-0.2
2,754,367	+				-0.3
2,754,367	+				+0.5
2,754,367	+				+0.4
2,754,367	+				-1.8
2,754,367	+				-1.1
2,754,375	-				-0.8
2,754,375	-				-1.3
2,754,375	-				-1.1
2,754,375	-				+0.8
2,754,375	-				+0.1
2,754,375	-				+0.6
2,754,375	-				-0.4
2,754,375	-				-0.4
2,754,375	-				-2.1
2,754,398	-				-1.2
2,754,423	-				+0.6
2,754,428	-				-0.9
2,754,434	-				-2.0
2,754,435	+				-0.5
2,754,490	+				-1.6
2,754,491	-				+0.8
2,754,495	+				+1.5
2,754,495	+				-1.4
2,754,495	+				-2.4
2,754,495	+				-0.9
2,754,495	+				+0.3
2,754,495	+				-1.1
2,754,498	-				+0.1
2,754,503	-				-0.4
2,754,503	-				-1.3
2,754,503	-				-0.3
2,754,503	-				-0.3
2,754,513	-				+1.4
2,754,521	-				-0.1
2,754,521	-				+0.5
2,754,529	-				-0.0
2,754,544	+				+0.5
2,754,552	-				+1.2
2,754,553	-				-0.2
2,754,554	-				-0.2
2,754,560	-				-1.4
2,754,565	+				+1.7
2,754,573	-				+0.9
2,754,611	-				+0.5
2,754,621	-				+0.2
2,754,636	+				+1.0
2,754,636	+				-1.1
2,754,636	+				-0.5
2,754,636	+				-0.0
2,754,636	+				-0.3
2,754,636	+				+0.1
2,754,636	+				-1.1
2,754,644	-				-2.4
2,754,644	-				+0.4
2,754,644	-				-0.5
2,754,644	-				+1.3
2,754,644	-				-0.0
2,754,644	-				+0.5
2,754,644	-				-0.6
2,754,646	-				-0.1
2,754,669	-				-2.5
2,754,670	+				-1.7
2,754,678	-				+0.9
2,754,678	-				-1.0
2,754,729	+		GFF2731	0.12	+0.4
2,754,731	+		GFF2731	0.12	+0.1
2,754,737	-		GFF2731	0.13	+0.3
2,754,739	-		GFF2731	0.13	+0.5
2,754,741	+		GFF2731	0.13	-1.4
2,754,741	+		GFF2731	0.13	+0.4
2,754,741	+		GFF2731	0.13	+0.5
2,754,741	+		GFF2731	0.13	+0.8
2,754,747	-		GFF2731	0.13	-2.5
2,754,749	-		GFF2731	0.14	+0.5
2,754,751	+		GFF2731	0.14	-0.8
2,754,751	+		GFF2731	0.14	-0.1
2,754,754	-		GFF2731	0.14	-0.2
2,754,756	+		GFF2731	0.14	-1.9
2,754,756	+		GFF2731	0.14	-1.1
2,754,756	+		GFF2731	0.14	-0.0
2,754,756	+		GFF2731	0.14	-1.3
2,754,758	+		GFF2731	0.14	-0.5
2,754,758	+		GFF2731	0.14	-1.5
2,754,758	+		GFF2731	0.14	-0.2
2,754,764	-		GFF2731	0.14	-0.3
2,754,764	-		GFF2731	0.14	-0.6
2,754,766	-		GFF2731	0.15	-1.1
2,754,766	-		GFF2731	0.15	+0.5
2,754,777	+		GFF2731	0.15	-0.6
2,754,785	-		GFF2731	0.16	-0.5
2,754,819	-		GFF2731	0.18	+1.3
2,754,833	+		GFF2731	0.19	+0.5
2,754,840	+		GFF2731	0.19	-0.4
2,754,848	-		GFF2731	0.19	+0.1
2,754,848	-		GFF2731	0.19	-1.1
2,754,868	-		GFF2731	0.21	-1.5
2,754,882	+		GFF2731	0.21	+1.0
2,754,888	+		GFF2731	0.22	+0.1
2,754,888	+		GFF2731	0.22	-1.9
2,754,890	-		GFF2731	0.22	+1.1
2,754,894	-		GFF2731	0.22	+0.6
2,754,896	-		GFF2731	0.22	+0.3
2,754,896	-		GFF2731	0.22	-0.8
2,754,897	+		GFF2731	0.22	-1.5
2,754,905	-		GFF2731	0.23	+0.1
2,754,918	+		GFF2731	0.24	-0.7
2,754,918	+		GFF2731	0.24	-0.6
2,754,926	-		GFF2731	0.24	+0.5
2,754,926	-		GFF2731	0.24	-0.3
2,754,933	+		GFF2731	0.24	-0.7
2,754,935	+		GFF2731	0.25	-1.9
2,754,935	+		GFF2731	0.25	+0.6
2,754,935	+		GFF2731	0.25	+0.9
2,754,935	+		GFF2731	0.25	+0.9
2,754,935	+		GFF2731	0.25	+0.1
2,754,942	+		GFF2731	0.25	-1.2
2,754,942	+		GFF2731	0.25	-0.7
2,754,943	-		GFF2731	0.25	+0.6
2,754,943	-		GFF2731	0.25	+0.8
2,754,943	-		GFF2731	0.25	-0.5
2,754,943	-		GFF2731	0.25	+0.8
2,754,943	-		GFF2731	0.25	-0.4
2,754,950	-		GFF2731	0.25	+0.8
2,754,950	-		GFF2731	0.25	+1.1
2,754,950	-		GFF2731	0.25	-1.9
2,754,950	-		GFF2731	0.25	+0.4
2,754,950	-		GFF2731	0.25	+0.3
2,754,957	+		GFF2731	0.26	-0.9
2,754,965	-		GFF2731	0.26	-0.1
2,754,965	-		GFF2731	0.26	+0.6
2,754,965	-		GFF2731	0.26	-1.5
2,754,975	-		GFF2731	0.27	+1.2
2,754,984	+		GFF2731	0.28	-0.3
2,754,986	+		GFF2731	0.28	-1.9
2,755,000	+		GFF2731	0.28	+0.5
2,755,013	+		GFF2731	0.29	+0.8
2,755,022	-		GFF2731	0.30	+0.3
2,755,024	+		GFF2731	0.30	-1.4
2,755,032	+		GFF2731	0.30	+0.4
2,755,032	+		GFF2731	0.30	+0.1
2,755,032	-		GFF2731	0.30	+0.3
2,755,040	-		GFF2731	0.31	-1.6
2,755,043	+		GFF2731	0.31	-0.1
2,755,043	+		GFF2731	0.31	+0.6
2,755,043	+		GFF2731	0.31	+0.2
2,755,046	-		GFF2731	0.31	+0.9
2,755,051	-		GFF2731	0.31	+0.9
2,755,051	-		GFF2731	0.31	-1.1
2,755,065	+		GFF2731	0.32	-0.2
2,755,065	+		GFF2731	0.32	+2.1
2,755,070	+		GFF2731	0.33	-0.0
2,755,070	+		GFF2731	0.33	-1.2
2,755,070	+		GFF2731	0.33	-1.7
2,755,070	+		GFF2731	0.33	-0.4
2,755,070	+		GFF2731	0.33	+1.3
2,755,070	+		GFF2731	0.33	+1.7
2,755,070	+		GFF2731	0.33	+0.2
2,755,070	+		GFF2731	0.33	-0.2
2,755,070	+		GFF2731	0.33	-0.9
2,755,070	+		GFF2731	0.33	-1.0
2,755,070	+		GFF2731	0.33	-1.2
2,755,070	+		GFF2731	0.33	-0.6
2,755,070	+		GFF2731	0.33	-1.1
2,755,070	+		GFF2731	0.33	-0.4
2,755,070	+		GFF2731	0.33	+0.7
2,755,070	+		GFF2731	0.33	-0.1
2,755,070	+		GFF2731	0.33	-1.1
2,755,070	+		GFF2731	0.33	-0.4
2,755,070	+		GFF2731	0.33	+1.3
2,755,070	+		GFF2731	0.33	-0.1
2,755,070	+		GFF2731	0.33	+0.2
2,755,070	+		GFF2731	0.33	-1.3
2,755,070	+		GFF2731	0.33	-0.8
2,755,073	-		GFF2731	0.33	-0.3
2,755,073	-		GFF2731	0.33	+0.5
2,755,078	-		GFF2731	0.33	-0.3
2,755,078	-		GFF2731	0.33	-0.4
2,755,078	-		GFF2731	0.33	-0.4
2,755,078	-		GFF2731	0.33	-0.0
2,755,078	-		GFF2731	0.33	-0.1
2,755,078	-		GFF2731	0.33	-0.4
2,755,078	-		GFF2731	0.33	+0.8
2,755,078	-		GFF2731	0.33	+0.9
2,755,078	-		GFF2731	0.33	+0.2
2,755,078	-		GFF2731	0.33	-0.3
2,755,078	-		GFF2731	0.33	+0.1
2,755,078	-		GFF2731	0.33	-0.2
2,755,078	-		GFF2731	0.33	+0.4
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2,755,078	-		GFF2731	0.33	+0.9
2,755,078	-		GFF2731	0.33	-1.9
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2,755,183	+		GFF2731	0.39	+1.1
2,755,183	+		GFF2731	0.39	+1.1
2,755,183	+		GFF2731	0.39	-0.7
2,755,183	+		GFF2731	0.39	+1.4
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2,755,191	-		GFF2731	0.40	-0.4
2,755,191	-		GFF2731	0.40	-0.1
2,755,191	-		GFF2731	0.40	+0.4
2,755,191	-		GFF2731	0.40	-0.8
2,755,191	-		GFF2731	0.40	+1.1
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2,755,202	+		GFF2731	0.40	-1.5
2,755,202	+		GFF2731	0.40	-1.8
2,755,202	+		GFF2731	0.40	+1.0
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2,755,202	+		GFF2731	0.40	-0.4
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2,755,210	-		GFF2731	0.41	-0.1
2,755,210	-		GFF2731	0.41	+0.5
2,755,210	-		GFF2731	0.41	+0.7
2,755,210	-		GFF2731	0.41	+0.7
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2,755,471	-		GFF2731	0.56	-1.6
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2,755,520	+		GFF2731	0.59	-0.9
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2,755,520	+		GFF2731	0.59	+0.5
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2,755,528	-		GFF2731	0.60	-0.1
2,755,528	-		GFF2731	0.60	+0.3
2,755,528	-		GFF2731	0.60	-1.1
2,755,528	-		GFF2731	0.60	+0.3
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2,755,565	+		GFF2731	0.62	+0.6
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2,755,588	-		GFF2731	0.63	+0.3
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2,755,645	+		GFF2731	0.67	+1.2
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2,755,655	+		GFF2731	0.67	-1.4
2,755,655	+		GFF2731	0.67	+1.2
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2,755,682	-		GFF2731	0.69	-0.1
2,755,688	-		GFF2731	0.69	-0.2
2,755,695	+		GFF2731	0.70	-0.8
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2,755,698	-		GFF2731	0.70	-0.8
2,755,703	-		GFF2731	0.70	-0.6
2,755,704	+		GFF2731	0.70	+0.1
2,755,704	+		GFF2731	0.70	-1.5
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2,755,770	+		GFF2731	0.74	-1.6
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2,755,818	-		GFF2731	0.77	-1.8
2,755,833	-		GFF2731	0.78	-0.0
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2,755,870	-		GFF2731	0.80	-0.5
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2,755,894	-		GFF2731	0.82	-0.1
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2,755,905	+		GFF2731	0.82	+0.3
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2,755,959	-		GFF2731	0.85	-1.1
2,755,959	-		GFF2731	0.85	-1.1
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2,755,970	+		GFF2731	0.86	-0.0
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2,755,971	+		GFF2731	0.86	+0.9
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2,755,987	-		GFF2731	0.87	+1.1
2,755,990	-		GFF2731	0.87	-0.9
2,755,994	+		GFF2731	0.88	-0.6
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2,756,052	-				-0.5
2,756,060	+				+0.3
2,756,070	+				+0.4
2,756,070	+				+1.4
2,756,078	+				-0.8
2,756,088	+				-2.2
2,756,091	-				+1.7
2,756,098	+				+0.4
2,756,098	+				+0.2
2,756,106	-				+0.1
2,756,106	-				-1.1
2,756,106	-				-1.0
2,756,106	-				-0.4
2,756,116	-				+0.9
2,756,123	+				-0.9
2,756,127	+				-0.6
2,756,131	-				-0.3
2,756,131	-				+1.4
2,756,131	-				+0.3
2,756,131	-				+0.7
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2,756,133	+				+1.2
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2,756,133	+				-0.0
2,756,133	+				-0.1
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2,756,141	-				-0.3
2,756,141	-				+1.0
2,756,141	-				-0.8
2,756,141	-				-1.3
2,756,141	-				-1.7
2,756,141	-				-0.3
2,756,141	-				+0.7
2,756,141	-				+0.4
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2,756,168	-				-0.9
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2,756,228	+				-2.6
2,756,228	+				+0.1
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2,756,365	-				-0.8
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2,756,384	+				+1.1
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