Strain Fitness in Sphingobium sp. HT1-2 around GFF2669

Experiment: EMM_noCarbon with Sucrose and Putrescine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Putrescine
2,684,474	-				+0.3
2,684,475	+				-1.2
2,684,483	-				-0.5
2,684,493	+				-0.7
2,684,501	-		GFF2667	0.11	-0.4
2,684,501	-		GFF2667	0.11	-2.3
2,684,501	-		GFF2667	0.11	+0.3
2,684,509	-		GFF2667	0.12	-1.0
2,684,516	-		GFF2667	0.13	-0.5
2,684,516	-		GFF2667	0.13	+0.9
2,684,518	+		GFF2667	0.13	-0.3
2,684,519	-		GFF2667	0.13	-2.6
2,684,519	-		GFF2667	0.13	-0.5
2,684,527	+		GFF2667	0.14	-0.9
2,684,527	+		GFF2667	0.14	+0.5
2,684,538	+		GFF2667	0.16	+0.4
2,684,558	+		GFF2667	0.18	-1.6
2,684,563	+		GFF2667	0.19	+0.4
2,684,571	+		GFF2667	0.20	+0.3
2,684,571	-		GFF2667	0.20	-2.0
2,684,571	-		GFF2667	0.20	+0.2
2,684,571	-		GFF2667	0.20	-0.2
2,684,579	+		GFF2667	0.21	-0.3
2,684,579	+		GFF2667	0.21	-0.3
2,684,579	+		GFF2667	0.21	+0.5
2,684,579	+		GFF2667	0.21	+0.5
2,684,579	+		GFF2667	0.21	+0.5
2,684,579	-		GFF2667	0.21	-0.3
2,684,587	-		GFF2667	0.22	+0.5
2,684,587	-		GFF2667	0.22	-2.5
2,684,587	-		GFF2667	0.22	+1.2
2,684,591	+		GFF2667	0.23	+0.4
2,684,596	+		GFF2667	0.24	-1.3
2,684,605	-		GFF2667	0.25	-0.3
2,684,621	+		GFF2667	0.27	-0.8
2,684,629	-		GFF2667	0.28	-0.4
2,684,629	-		GFF2667	0.28	-2.0
2,684,629	-		GFF2667	0.28	-0.5
2,684,638	+		GFF2667	0.29	-0.7
2,684,638	+		GFF2667	0.29	-1.6
2,684,638	+		GFF2667	0.29	-1.6
2,684,638	+		GFF2667	0.29	-2.6
2,684,638	+		GFF2667	0.29	-2.4
2,684,638	+		GFF2667	0.29	+1.1
2,684,638	+		GFF2667	0.29	-0.4
2,684,638	+		GFF2667	0.29	-1.2
2,684,638	+		GFF2667	0.29	+0.8
2,684,638	+		GFF2667	0.29	+1.1
2,684,638	+		GFF2667	0.29	+0.4
2,684,638	+		GFF2667	0.29	+0.1
2,684,646	-		GFF2667	0.31	+0.3
2,684,646	-		GFF2667	0.31	-0.3
2,684,646	-		GFF2667	0.31	+0.2
2,684,646	-		GFF2667	0.31	+0.7
2,684,646	-		GFF2667	0.31	+0.8
2,684,646	-		GFF2667	0.31	-2.8
2,684,646	-		GFF2667	0.31	+0.6
2,684,646	-		GFF2667	0.31	+1.0
2,684,646	-		GFF2667	0.31	-1.3
2,684,646	-		GFF2667	0.31	-2.3
2,684,646	-		GFF2667	0.31	+0.7
2,684,646	-		GFF2667	0.31	-1.1
2,684,646	-		GFF2667	0.31	-0.6
2,684,646	-		GFF2667	0.31	-1.9
2,684,646	-		GFF2667	0.31	-1.2
2,684,647	-		GFF2667	0.31	+1.4
2,684,655	+		GFF2667	0.32	+0.5
2,684,655	-		GFF2667	0.32	-0.2
2,684,660	+		GFF2667	0.33	-2.1
2,684,664	+		GFF2667	0.33	+1.3
2,684,664	+		GFF2667	0.33	+0.1
2,684,677	+		GFF2667	0.35	-1.4
2,684,685	-		GFF2667	0.36	-1.2
2,684,695	-		GFF2667	0.37	-1.8
2,684,699	+		GFF2667	0.38	+0.8
2,684,706	+		GFF2667	0.39	+1.4
2,684,711	+		GFF2667	0.40	-2.1
2,684,729	+		GFF2667	0.42	-1.6
2,684,737	-		GFF2667	0.43	+0.6
2,684,742	+		GFF2667	0.44	+0.1
2,684,775	-		GFF2667	0.48	-0.7
2,684,781	+		GFF2667	0.49	-0.6
2,684,781	+		GFF2667	0.49	-0.7
2,684,788	-		GFF2667	0.50	-1.3
2,684,789	+		GFF2667	0.50	-0.5
2,684,791	+		GFF2667	0.51	-1.1
2,684,791	+		GFF2667	0.51	-0.5
2,684,797	-		GFF2667	0.51	-0.1
2,684,799	-		GFF2667	0.52	+0.1
2,684,799	-		GFF2667	0.52	-2.1
2,684,799	-		GFF2667	0.52	+0.6
2,684,799	-		GFF2667	0.52	-0.2
2,684,803	+		GFF2667	0.52	-0.9
2,684,810	-		GFF2667	0.53	-1.4
2,684,811	-		GFF2667	0.53	+0.5
2,684,818	-		GFF2667	0.54	-1.8
2,684,822	+		GFF2667	0.55	+0.5
2,684,822	+		GFF2667	0.55	-1.7
2,684,822	+		GFF2667	0.55	-0.0
2,684,822	+		GFF2667	0.55	+0.6
2,684,822	+		GFF2667	0.55	-0.3
2,684,825	-		GFF2667	0.55	+1.3
2,684,825	-		GFF2667	0.55	-0.3
2,684,825	-		GFF2667	0.55	-0.5
2,684,825	-		GFF2667	0.55	+0.8
2,684,825	-		GFF2667	0.55	+1.2
2,684,825	-		GFF2667	0.55	+1.4
2,684,827	+		GFF2667	0.56	+0.7
2,684,827	+		GFF2667	0.56	-1.5
2,684,830	-		GFF2667	0.56	+1.3
2,684,830	-		GFF2667	0.56	-1.2
2,684,830	-		GFF2667	0.56	-0.9
2,684,830	-		GFF2667	0.56	-1.0
2,684,835	-		GFF2667	0.57	-1.9
2,684,845	+		GFF2667	0.58	+1.5
2,684,845	+		GFF2667	0.58	-1.9
2,684,853	+		GFF2667	0.59	-1.8
2,684,853	+		GFF2667	0.59	+1.9
2,684,853	-		GFF2667	0.59	-0.2
2,684,853	-		GFF2667	0.59	-0.8
2,684,853	-		GFF2667	0.59	-0.4
2,684,853	-		GFF2667	0.59	-0.8
2,684,858	+		GFF2667	0.60	+1.5
2,684,858	-		GFF2667	0.60	-0.4
2,684,861	-		GFF2667	0.60	+0.8
2,684,866	-		GFF2667	0.61	+1.1
2,684,870	+		GFF2667	0.62	+0.6
2,684,870	+		GFF2667	0.62	-1.9
2,684,871	-		GFF2667	0.62	+0.9
2,684,871	-		GFF2667	0.62	+0.5
2,684,878	-		GFF2667	0.63	+0.5
2,684,894	-		GFF2667	0.65	+0.3
2,684,926	+		GFF2667	0.69	-0.4
2,684,926	+		GFF2667	0.69	-0.1
2,684,926	+		GFF2667	0.69	-1.2
2,684,926	+		GFF2667	0.69	-0.6
2,684,927	+		GFF2667	0.69	+0.7
2,684,927	+		GFF2667	0.69	-1.4
2,684,927	+		GFF2667	0.69	-1.6
2,684,927	+		GFF2667	0.69	-0.3
2,684,932	-		GFF2667	0.70	+0.4
2,684,934	-		GFF2667	0.70	+0.2
2,684,934	-		GFF2667	0.70	-1.3
2,684,934	-		GFF2667	0.70	-1.5
2,684,934	-		GFF2667	0.70	+0.0
2,684,934	-		GFF2667	0.70	-0.4
2,684,935	-		GFF2667	0.71	+0.5
2,684,935	-		GFF2667	0.71	+0.4
2,684,935	-		GFF2667	0.71	+0.7
2,684,935	-		GFF2667	0.71	-0.2
2,684,935	-		GFF2667	0.71	-0.3
2,684,956	-		GFF2667	0.73	+0.1
2,684,963	-		GFF2667	0.74	+0.3
2,684,965	-		GFF2667	0.75	+0.8
2,684,985	-		GFF2667	0.77	-1.9
2,685,003	-		GFF2667	0.80	-1.4
2,685,003	-		GFF2667	0.80	+1.1
2,685,016	-		GFF2667	0.82	+0.4
2,685,024	-		GFF2667	0.83	-1.2
2,685,034	-		GFF2667	0.84	-0.2
2,685,035	+		GFF2667	0.84	-0.1
2,685,035	+		GFF2667	0.84	+1.4
2,685,036	+		GFF2667	0.85	+1.3
2,685,041	+		GFF2667	0.85	-1.8
2,685,044	-		GFF2667	0.86	-1.4
2,685,086	-				+0.4
2,685,086	-				-3.0
2,685,086	-				-2.0
2,685,103	+				-1.3
2,685,162	-				+0.4
2,685,324	-				-0.8
2,685,329	+				+0.7
2,685,337	-				-1.4
2,685,363	+				-0.0
2,685,363	+				+1.4
2,685,371	-				+1.3
2,685,371	-				+0.5
2,685,371	-				+0.2
2,685,411	+				-1.7
2,685,419	-				-0.3
2,685,419	-				-0.1
2,685,421	-				+0.1
2,685,447	+				+1.1
2,685,456	+				-0.6
2,685,465	-				+0.6
2,685,487	+				-0.2
2,685,489	+				+0.1
2,685,493	-		GFF2669	0.11	+0.7
2,685,495	+		GFF2669	0.12	-1.1
2,685,495	+		GFF2669	0.12	+0.7
2,685,498	-		GFF2669	0.13	-2.1
2,685,503	-		GFF2669	0.15	+0.6
2,685,503	-		GFF2669	0.15	+0.3
2,685,507	+		GFF2669	0.17	-1.5
2,685,507	+		GFF2669	0.17	-0.3
2,685,507	+		GFF2669	0.17	-0.5
2,685,507	+		GFF2669	0.17	+0.7
2,685,507	+		GFF2669	0.17	+0.5
2,685,507	+		GFF2669	0.17	+0.8
2,685,515	-		GFF2669	0.20	+0.5
2,685,515	-		GFF2669	0.20	+1.0
2,685,529	+		GFF2669	0.25	+0.1
2,685,562	+		GFF2669	0.38	+0.7
2,685,566	-		GFF2669	0.40	+0.3
2,685,568	+		GFF2669	0.41	-0.5
2,685,576	-		GFF2669	0.44	-1.6
2,685,579	-		GFF2669	0.45	-0.9
2,685,581	-		GFF2669	0.46	-0.3
2,685,596	+		GFF2669	0.52	-1.3
2,685,596	+		GFF2669	0.52	+0.3
2,685,604	-		GFF2669	0.55	+0.7
2,685,604	-		GFF2669	0.55	+0.2
2,685,612	+		GFF2669	0.58	-0.9
2,685,620	-		GFF2669	0.61	-0.3
2,685,635	-		GFF2669	0.67	-0.9
2,685,635	-		GFF2669	0.67	-0.5
2,685,645	+		GFF2669	0.71	-1.1
2,685,645	+		GFF2669	0.71	-0.4
2,685,645	+		GFF2669	0.71	-0.6
2,685,645	+		GFF2669	0.71	-0.5
2,685,645	+		GFF2669	0.71	-1.2
2,685,645	+		GFF2669	0.71	+0.4
2,685,645	+		GFF2669	0.71	-0.2
2,685,650	+		GFF2669	0.73	+0.4
2,685,653	-		GFF2669	0.74	+0.7
2,685,653	-		GFF2669	0.74	+1.3
2,685,653	-		GFF2669	0.74	+0.9
2,685,714	+				-1.1
2,685,714	+				-0.6
2,685,714	+				-0.2
2,685,714	+				+0.2
2,685,714	+				-0.6
2,685,714	+				+0.5
2,685,714	+				-0.4
2,685,722	-				-0.5
2,685,722	-				-2.9
2,685,722	-				+0.8
2,685,722	-				-0.9
2,685,722	-				+0.3
2,685,722	-				+0.7
2,685,724	+				-0.4
2,685,729	+				-0.3
2,685,729	+				+0.5
2,685,729	+				-1.5
2,685,729	+				-0.6
2,685,732	-				-1.1
2,685,737	-				-1.0
2,685,737	-				+0.8
2,685,737	-				+1.5
2,685,737	-				-1.2
2,685,739	-				+1.3
2,685,764	+				-0.3
2,685,771	-				-2.2
2,685,771	-				+0.8
2,685,794	-				-2.4
2,685,835	+		GFF2670	0.10	-0.5
2,685,837	+		GFF2670	0.10	+0.8
2,685,843	-		GFF2670	0.11	-1.0
2,685,866	+		GFF2670	0.13	-0.4
2,685,866	+		GFF2670	0.13	-0.5
2,685,876	+		GFF2670	0.14	-0.5
2,685,881	-		GFF2670	0.15	-1.9
2,685,883	+		GFF2670	0.15	+0.5
2,685,883	+		GFF2670	0.15	-0.1
2,685,883	+		GFF2670	0.15	+0.1
2,685,883	+		GFF2670	0.15	-0.1
2,685,883	+		GFF2670	0.15	-0.8
2,685,883	+		GFF2670	0.15	-0.3
2,685,883	+		GFF2670	0.15	-1.5
2,685,883	+		GFF2670	0.15	+0.5
2,685,883	+		GFF2670	0.15	-0.8
2,685,883	+		GFF2670	0.15	+0.7
2,685,891	-		GFF2670	0.16	+0.9
2,685,891	-		GFF2670	0.16	+1.8
2,685,891	-		GFF2670	0.16	-0.7
2,685,910	-		GFF2670	0.18	+0.2
2,685,912	-		GFF2670	0.18	-2.4
2,685,923	+		GFF2670	0.19	-2.2
2,685,926	-		GFF2670	0.19	+1.3
2,685,930	+		GFF2670	0.20	-0.7
2,685,938	-		GFF2670	0.21	+1.4
2,685,938	-		GFF2670	0.21	+0.6
2,685,966	+		GFF2670	0.23	-1.5
2,685,988	-		GFF2670	0.26	+0.5
2,685,988	-		GFF2670	0.26	-0.6
2,685,988	-		GFF2670	0.26	+0.5
2,685,997	-		GFF2670	0.26	-0.1
2,686,011	+		GFF2670	0.28	-1.4
2,686,014	+		GFF2670	0.28	+0.0
2,686,014	+		GFF2670	0.28	-1.4
2,686,014	+		GFF2670	0.28	+1.2
2,686,014	+		GFF2670	0.28	+0.4
2,686,014	+		GFF2670	0.28	-0.3
2,686,014	+		GFF2670	0.28	-0.6
2,686,014	+		GFF2670	0.28	-0.7
2,686,014	+		GFF2670	0.28	-0.2
2,686,014	+		GFF2670	0.28	+0.1
2,686,014	+		GFF2670	0.28	-0.3
2,686,014	+		GFF2670	0.28	-0.0
2,686,022	+		GFF2670	0.29	-1.8
2,686,022	-		GFF2670	0.29	+0.3
2,686,022	-		GFF2670	0.29	+0.7
2,686,022	-		GFF2670	0.29	-0.0
2,686,022	-		GFF2670	0.29	-1.9
2,686,022	-		GFF2670	0.29	+0.4
2,686,022	-		GFF2670	0.29	+0.2
2,686,022	-		GFF2670	0.29	+0.3
2,686,029	-		GFF2670	0.30	+0.8
2,686,029	-		GFF2670	0.30	+2.2
2,686,033	+		GFF2670	0.30	+1.1
2,686,033	+		GFF2670	0.30	+0.9
2,686,033	+		GFF2670	0.30	+1.4
2,686,033	+		GFF2670	0.30	-1.1
2,686,033	+		GFF2670	0.30	-1.2
2,686,033	+		GFF2670	0.30	-0.2
2,686,033	+		GFF2670	0.30	-0.5
2,686,033	+		GFF2670	0.30	-1.3
2,686,033	+		GFF2670	0.30	-0.7
2,686,033	+		GFF2670	0.30	-0.9
2,686,033	+		GFF2670	0.30	+1.7
2,686,033	+		GFF2670	0.30	-1.5
2,686,033	+		GFF2670	0.30	-1.5
2,686,033	+		GFF2670	0.30	-0.5
2,686,036	-		GFF2670	0.30	-0.5
2,686,041	-		GFF2670	0.31	-0.5
2,686,041	-		GFF2670	0.31	+0.9
2,686,041	-		GFF2670	0.31	-0.9
2,686,041	-		GFF2670	0.31	+0.2
2,686,043	+		GFF2670	0.31	-0.7
2,686,043	+		GFF2670	0.31	-0.0
2,686,043	+		GFF2670	0.31	-0.9
2,686,043	+		GFF2670	0.31	-2.4
2,686,043	+		GFF2670	0.31	+0.2
2,686,051	-		GFF2670	0.32	+0.1
2,686,051	-		GFF2670	0.32	-1.1
2,686,051	-		GFF2670	0.32	+0.1
2,686,051	-		GFF2670	0.32	+1.1
2,686,051	-		GFF2670	0.32	+0.7
2,686,051	-		GFF2670	0.32	+0.4
2,686,051	-		GFF2670	0.32	-1.5
2,686,051	-		GFF2670	0.32	-1.2
2,686,057	-		GFF2670	0.33	-0.2
2,686,059	+		GFF2670	0.33	+0.1
2,686,071	+		GFF2670	0.34	-1.2
2,686,073	+		GFF2670	0.34	-0.3
2,686,079	-		GFF2670	0.35	-1.7
2,686,091	+		GFF2670	0.36	-2.1
2,686,091	+		GFF2670	0.36	-0.2
2,686,091	+		GFF2670	0.36	-1.1
2,686,095	-		GFF2670	0.36	-0.2
2,686,099	-		GFF2670	0.37	-0.5
2,686,102	+		GFF2670	0.37	+0.1
2,686,110	-		GFF2670	0.38	-0.8
2,686,110	-		GFF2670	0.38	-0.8
2,686,110	-		GFF2670	0.38	-0.5
2,686,115	-		GFF2670	0.38	-0.5
2,686,122	-		GFF2670	0.39	-1.2
2,686,122	-		GFF2670	0.39	-0.5
2,686,137	-		GFF2670	0.41	+0.6
2,686,147	+		GFF2670	0.42	-1.4
2,686,147	+		GFF2670	0.42	-0.6
2,686,147	+		GFF2670	0.42	+1.0
2,686,147	+		GFF2670	0.42	+0.6
2,686,147	+		GFF2670	0.42	+0.6
2,686,147	+		GFF2670	0.42	+0.5
2,686,155	-		GFF2670	0.42	-2.5
2,686,155	-		GFF2670	0.42	-0.6
2,686,155	-		GFF2670	0.42	-2.0
2,686,155	-		GFF2670	0.42	-0.3
2,686,155	-		GFF2670	0.42	-0.9
2,686,155	-		GFF2670	0.42	+0.5
2,686,155	-		GFF2670	0.42	+0.5
2,686,155	-		GFF2670	0.42	-0.6
2,686,155	-		GFF2670	0.42	+0.9
2,686,155	-		GFF2670	0.42	+0.0
2,686,162	+		GFF2670	0.43	-0.2
2,686,178	+		GFF2670	0.45	-0.8
2,686,181	+		GFF2670	0.45	-2.0
2,686,186	+		GFF2670	0.46	-2.8
2,686,189	-		GFF2670	0.46	-0.0
2,686,197	+		GFF2670	0.47	-0.1
2,686,215	+		GFF2670	0.48	-0.2
2,686,226	+		GFF2670	0.50	-2.3
2,686,232	-		GFF2670	0.50	+0.1
2,686,238	-		GFF2670	0.51	-1.4
2,686,242	+		GFF2670	0.51	-1.9
2,686,242	+		GFF2670	0.51	-0.7
2,686,242	+		GFF2670	0.51	-1.1
2,686,242	+		GFF2670	0.51	+0.2
2,686,245	+		GFF2670	0.51	-2.6
2,686,250	-		GFF2670	0.52	+0.5
2,686,250	-		GFF2670	0.52	+1.0
2,686,250	-		GFF2670	0.52	+0.4
2,686,250	-		GFF2670	0.52	+0.3
2,686,256	+		GFF2670	0.53	-0.4
2,686,256	+		GFF2670	0.53	-0.9
2,686,264	-		GFF2670	0.53	+1.1
2,686,264	-		GFF2670	0.53	-0.1
2,686,264	-		GFF2670	0.53	+0.2
2,686,264	-		GFF2670	0.53	-0.5
2,686,284	+		GFF2670	0.55	-0.4
2,686,286	+		GFF2670	0.56	+0.3
2,686,288	-		GFF2670	0.56	-1.9
2,686,301	+		GFF2670	0.57	+1.4
2,686,301	+		GFF2670	0.57	+0.8
2,686,309	-		GFF2670	0.58	+0.1
2,686,311	+		GFF2670	0.58	-1.6
2,686,317	+		GFF2670	0.59	-0.8
2,686,321	+		GFF2670	0.59	+0.2
2,686,337	+		GFF2670	0.61	-0.9
2,686,363	+		GFF2670	0.63	+0.3
2,686,373	+		GFF2670	0.64	+1.6
2,686,387	+		GFF2670	0.66	-0.5
2,686,387	+		GFF2670	0.66	+0.0
2,686,387	-		GFF2670	0.66	-1.7
2,686,395	-		GFF2670	0.67	-0.6
2,686,395	-		GFF2670	0.67	-0.4
2,686,396	+		GFF2670	0.67	-1.9
2,686,403	-		GFF2670	0.67	-0.7
2,686,405	+		GFF2670	0.68	+1.2
2,686,413	-		GFF2670	0.68	+0.1
2,686,419	+		GFF2670	0.69	+0.3
2,686,419	+		GFF2670	0.69	-0.1
2,686,427	-		GFF2670	0.70	-0.3
2,686,427	-		GFF2670	0.70	-0.6
2,686,450	+		GFF2670	0.72	-1.6
2,686,452	+		GFF2670	0.72	-1.3
2,686,452	+		GFF2670	0.72	-2.3
2,686,460	-		GFF2670	0.73	-0.1
2,686,460	-		GFF2670	0.73	-1.3
2,686,460	-		GFF2670	0.73	-1.0
2,686,460	-		GFF2670	0.73	+0.1
2,686,463	-		GFF2670	0.73	+1.7
2,686,469	+		GFF2670	0.74	+0.7
2,686,472	-		GFF2670	0.74	+1.0
2,686,479	-		GFF2670	0.75	-0.7
2,686,479	-		GFF2670	0.75	-0.8
2,686,487	+		GFF2670	0.76	+1.4
2,686,496	-		GFF2670	0.77	-0.2
2,686,502	-		GFF2670	0.77	+0.4
2,686,536	+		GFF2670	0.81	-1.2
2,686,613	+		GFF2670	0.89	+1.0
2,686,640	+				-0.2
2,686,640	+				+0.4
2,686,645	+				-2.1
2,686,648	-				-0.4
2,686,650	+				+0.1
2,686,650	+				-0.3
2,686,662	-				-0.6
2,686,668	+				+1.9
2,686,681	-				+1.3
2,686,681	-				+1.4
2,686,681	-				-0.8
2,686,685	-				-0.9
2,686,699	+				-0.6
2,686,704	-				+0.2
2,686,708	-				+0.4