Strain Fitness in Sphingobium sp. HT1-2 around GFF2586

Experiment: EMM_noCarbon with Sucrose and Putrescine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Putrescine
2,600,290	+		GFF2585	0.52	+1.4
2,600,294	-		GFF2585	0.52	-2.0
2,600,297	-		GFF2585	0.52	+0.9
2,600,319	-		GFF2585	0.53	-2.4
2,600,328	+		GFF2585	0.53	-0.6
2,600,343	-		GFF2585	0.54	+0.7
2,600,424	+		GFF2585	0.58	+1.0
2,600,424	+		GFF2585	0.58	+0.0
2,600,433	+		GFF2585	0.59	-0.5
2,600,438	+		GFF2585	0.59	+0.5
2,600,438	+		GFF2585	0.59	+0.4
2,600,438	+		GFF2585	0.59	-1.3
2,600,438	+		GFF2585	0.59	+0.6
2,600,438	+		GFF2585	0.59	-0.9
2,600,439	-		GFF2585	0.59	+0.2
2,600,441	-		GFF2585	0.59	+0.9
2,600,446	-		GFF2585	0.59	-0.2
2,600,446	-		GFF2585	0.59	+1.1
2,600,446	-		GFF2585	0.59	-0.0
2,600,446	-		GFF2585	0.59	+0.6
2,600,446	-		GFF2585	0.59	-1.4
2,600,451	-		GFF2585	0.59	+0.6
2,600,458	+		GFF2585	0.60	-0.6
2,600,481	+		GFF2585	0.61	-0.2
2,600,483	+		GFF2585	0.61	+0.8
2,600,483	+		GFF2585	0.61	-0.9
2,600,483	+		GFF2585	0.61	-0.7
2,600,488	+		GFF2585	0.61	-0.2
2,600,491	-		GFF2585	0.61	-0.9
2,600,491	-		GFF2585	0.61	-3.2
2,600,491	-		GFF2585	0.61	+0.8
2,600,491	-		GFF2585	0.61	+0.1
2,600,491	-		GFF2585	0.61	-0.5
2,600,491	-		GFF2585	0.61	-1.0
2,600,509	+		GFF2585	0.62	-1.8
2,600,524	+		GFF2585	0.63	+1.6
2,600,532	-		GFF2585	0.63	+0.4
2,600,546	+		GFF2585	0.64	-1.5
2,600,546	+		GFF2585	0.64	-0.1
2,600,554	-		GFF2585	0.65	+0.3
2,600,564	-		GFF2585	0.65	+1.1
2,600,610	+		GFF2585	0.67	+0.0
2,600,610	+		GFF2585	0.67	-1.1
2,600,610	+		GFF2585	0.67	-0.1
2,600,610	+		GFF2585	0.67	-1.5
2,600,610	+		GFF2585	0.67	+0.3
2,600,610	+		GFF2585	0.67	-0.7
2,600,610	-		GFF2585	0.67	-0.1
2,600,610	-		GFF2585	0.67	+0.2
2,600,618	-		GFF2585	0.68	+0.8
2,600,618	-		GFF2585	0.68	-0.2
2,600,622	+		GFF2585	0.68	-1.5
2,600,634	+		GFF2585	0.68	+0.5
2,600,640	+		GFF2585	0.69	-1.4
2,600,648	+		GFF2585	0.69	+0.5
2,600,648	-		GFF2585	0.69	+2.4
2,600,648	-		GFF2585	0.69	-0.2
2,600,654	+		GFF2585	0.69	+0.1
2,600,656	+		GFF2585	0.70	-0.3
2,600,660	+		GFF2585	0.70	+0.4
2,600,660	+		GFF2585	0.70	+0.8
2,600,668	-		GFF2585	0.70	-0.8
2,600,668	-		GFF2585	0.70	+0.4
2,600,678	-		GFF2585	0.71	+0.8
2,600,686	+		GFF2585	0.71	-0.4
2,600,686	+		GFF2585	0.71	-0.3
2,600,689	-		GFF2585	0.71	-1.6
2,600,707	+		GFF2585	0.72	-1.6
2,600,707	+		GFF2585	0.72	+0.2
2,600,713	+		GFF2585	0.72	+1.0
2,600,713	+		GFF2585	0.72	-1.5
2,600,713	+		GFF2585	0.72	-0.5
2,600,714	+		GFF2585	0.72	-0.4
2,600,715	-		GFF2585	0.72	-1.3
2,600,715	-		GFF2585	0.72	-1.6
2,600,720	-		GFF2585	0.73	-2.0
2,600,721	-		GFF2585	0.73	+0.4
2,600,721	-		GFF2585	0.73	+0.3
2,600,721	-		GFF2585	0.73	-1.5
2,600,721	-		GFF2585	0.73	+0.4
2,600,721	-		GFF2585	0.73	-0.1
2,600,721	-		GFF2585	0.73	+0.8
2,600,721	-		GFF2585	0.73	-1.0
2,600,721	-		GFF2585	0.73	+0.2
2,600,721	-		GFF2585	0.73	-2.4
2,600,721	-		GFF2585	0.73	-1.2
2,600,721	-		GFF2585	0.73	-2.1
2,600,730	+		GFF2585	0.73	+0.6
2,600,730	+		GFF2585	0.73	+0.2
2,600,730	+		GFF2585	0.73	-0.5
2,600,730	+		GFF2585	0.73	+0.1
2,600,730	+		GFF2585	0.73	-1.4
2,600,730	+		GFF2585	0.73	+0.1
2,600,730	+		GFF2585	0.73	-0.6
2,600,731	-		GFF2585	0.73	+0.7
2,600,738	-		GFF2585	0.74	-2.3
2,600,738	-		GFF2585	0.74	-0.2
2,600,738	-		GFF2585	0.74	-0.4
2,600,738	-		GFF2585	0.74	+0.6
2,600,738	-		GFF2585	0.74	-0.3
2,600,738	-		GFF2585	0.74	+1.2
2,600,738	-		GFF2585	0.74	+0.4
2,600,741	+		GFF2585	0.74	-0.8
2,600,748	-		GFF2585	0.74	-0.8
2,600,762	+		GFF2585	0.75	+0.7
2,600,768	+		GFF2585	0.75	+0.4
2,600,771	-		GFF2585	0.75	-1.1
2,600,773	+		GFF2585	0.75	-1.9
2,600,773	+		GFF2585	0.75	+0.6
2,600,781	-		GFF2585	0.76	-0.4
2,600,821	+		GFF2585	0.78	+1.4
2,600,821	+		GFF2585	0.78	-1.9
2,600,821	+		GFF2585	0.78	+1.8
2,600,821	+		GFF2585	0.78	-0.7
2,600,821	+		GFF2585	0.78	-0.1
2,600,829	-		GFF2585	0.78	-0.0
2,600,829	-		GFF2585	0.78	-2.1
2,600,829	-		GFF2585	0.78	+1.2
2,600,829	-		GFF2585	0.78	+1.0
2,600,829	-		GFF2585	0.78	-0.5
2,600,829	-		GFF2585	0.78	-0.6
2,600,829	-		GFF2585	0.78	-0.3
2,600,829	-		GFF2585	0.78	-2.0
2,600,829	-		GFF2585	0.78	-1.4
2,600,842	-		GFF2585	0.79	+1.4
2,600,862	-		GFF2585	0.80	+0.4
2,600,865	+		GFF2585	0.80	+0.9
2,600,865	+		GFF2585	0.80	-2.4
2,600,865	+		GFF2585	0.80	-1.0
2,600,865	+		GFF2585	0.80	-1.1
2,600,865	+		GFF2585	0.80	-1.2
2,600,865	+		GFF2585	0.80	-0.5
2,600,866	-		GFF2585	0.80	-2.0
2,600,866	-		GFF2585	0.80	+0.1
2,600,868	-		GFF2585	0.80	-0.2
2,600,878	-		GFF2585	0.80	+0.5
2,600,882	+		GFF2585	0.81	+0.1
2,600,886	+		GFF2585	0.81	+1.1
2,600,890	-		GFF2585	0.81	+0.2
2,600,890	-		GFF2585	0.81	-1.1
2,600,895	-		GFF2585	0.81	+0.1
2,600,895	-		GFF2585	0.81	+1.2
2,600,895	-		GFF2585	0.81	-1.5
2,600,906	-		GFF2585	0.82	-1.4
2,600,924	+		GFF2585	0.83	-1.1
2,600,930	+		GFF2585	0.83	+1.0
2,600,943	-		GFF2585	0.84	-0.9
2,600,956	+		GFF2585	0.84	-1.4
2,600,960	+		GFF2585	0.84	+0.0
2,600,964	-		GFF2585	0.85	-0.2
2,600,968	-		GFF2585	0.85	-0.2
2,601,005	-		GFF2585	0.87	-1.7
2,601,011	+		GFF2585	0.87	+0.1
2,601,019	-		GFF2585	0.87	+0.1
2,601,038	+		GFF2585	0.88	-0.1
2,601,049	+		GFF2585	0.89	+0.4
2,601,054	+		GFF2585	0.89	+1.0
2,601,057	-		GFF2585	0.89	+0.8
2,601,062	-		GFF2585	0.89	-2.6
2,601,067	-		GFF2585	0.90	+0.6
2,601,074	-				-0.9
2,601,074	-				+0.4
2,601,081	+				-0.4
2,601,081	+				-0.4
2,601,081	+				-0.8
2,601,089	-				-0.7
2,601,109	+				+0.7
2,601,113	-				-2.9
2,601,114	+				-0.4
2,601,117	-				+2.0
2,601,117	-				+0.1
2,601,122	-				+0.5
2,601,126	+				+0.7
2,601,128	+				+0.5
2,601,128	+				-0.1
2,601,128	+				-0.3
2,601,128	+				-1.3
2,601,128	+				-2.0
2,601,133	+				-1.5
2,601,136	-				+0.6
2,601,137	+				-0.4
2,601,138	+				-0.5
2,601,139	+				+0.0
2,601,146	-				-1.9
2,601,163	+				+1.6
2,601,171	-				+0.6
2,601,197	+				+0.2
2,601,206	-				+0.8
2,601,214	+				-0.1
2,601,214	+				+0.0
2,601,222	-				+0.4
2,601,222	-				+0.4
2,601,224	+				+0.5
2,601,243	+				-0.5
2,601,243	+				-0.3
2,601,251	-				-1.2
2,601,251	-				+1.1
2,601,279	+				+1.5
2,601,284	+				-1.2
2,601,287	-				-1.0
2,601,287	-				-1.9
2,601,287	-				+0.6
2,601,287	-				-0.3
2,601,287	-				-1.0
2,601,304	-				-0.1
2,601,306	-				-1.0
2,601,306	-				+1.5
2,601,313	+				+0.4
2,601,317	+				-0.2
2,601,385	+		GFF2586	0.16	+0.8
2,601,390	-		GFF2586	0.17	-0.2
2,601,429	+		GFF2586	0.23	-0.7
2,601,464	-		GFF2586	0.29	+0.5
2,601,464	-		GFF2586	0.29	-0.7
2,601,466	+		GFF2586	0.29	-0.6
2,601,474	-		GFF2586	0.30	+0.5
2,601,479	-		GFF2586	0.31	-1.3
2,601,481	+		GFF2586	0.32	+0.1
2,601,481	+		GFF2586	0.32	+1.0
2,601,489	-		GFF2586	0.33	-2.2
2,601,489	-		GFF2586	0.33	+0.3
2,601,505	+		GFF2586	0.35	-1.4
2,601,510	+		GFF2586	0.36	-0.3
2,601,528	-		GFF2586	0.39	+0.6
2,601,528	-		GFF2586	0.39	+0.9
2,601,535	+		GFF2586	0.40	-1.2
2,601,539	+		GFF2586	0.41	-1.1
2,601,539	+		GFF2586	0.41	-1.5
2,601,539	+		GFF2586	0.41	-0.2
2,601,547	-		GFF2586	0.42	-1.2
2,601,547	-		GFF2586	0.42	-1.0
2,601,570	+		GFF2586	0.46	-0.3
2,601,589	+		GFF2586	0.49	-1.1
2,601,597	-		GFF2586	0.50	-0.8
2,601,597	-		GFF2586	0.50	-1.3
2,601,597	-		GFF2586	0.50	-0.1
2,601,597	-		GFF2586	0.50	-0.8
2,601,597	-		GFF2586	0.50	+1.1
2,601,623	+		GFF2586	0.54	-1.2
2,601,645	+		GFF2586	0.58	+0.6
2,601,690	+		GFF2586	0.65	-0.6
2,601,690	+		GFF2586	0.65	-2.4
2,601,692	+		GFF2586	0.65	-0.3
2,601,692	+		GFF2586	0.65	+0.6
2,601,692	+		GFF2586	0.65	+1.4
2,601,693	-		GFF2586	0.65	-0.9
2,601,700	-		GFF2586	0.66	-0.2
2,601,716	-		GFF2586	0.69	+1.0
2,601,727	+		GFF2586	0.70	-1.6
2,601,758	+		GFF2586	0.75	+0.4
2,601,758	+		GFF2586	0.75	-1.2
2,601,779	+		GFF2586	0.79	-0.1
2,601,783	-		GFF2586	0.79	-0.2
2,601,807	+		GFF2586	0.83	-0.2
2,601,807	+		GFF2586	0.83	+1.1
2,601,812	+		GFF2586	0.84	-1.2
2,601,815	-		GFF2586	0.84	+0.5
2,601,859	+				-0.3
2,601,870	-				-0.1
2,601,870	-				-1.7
2,601,885	+				-1.2
2,601,928	-				-0.6
2,601,932	+				-1.0
2,601,932	+				-0.8
2,601,936	+				-0.8
2,601,940	-				-2.3
2,601,940	-				-0.9
2,601,940	-				-1.3
2,601,940	-				+0.5
2,601,950	-				-2.1
2,601,978	+				+0.1
2,601,978	+				-0.8
2,601,978	+				-0.2
2,601,986	-				+0.4
2,601,986	-				-1.1
2,601,986	-				-1.1
2,601,986	-				+0.2
2,601,986	-				-0.8
2,601,986	-				-0.3
2,602,011	-		GFF2587	0.10	+1.4
2,602,034	+		GFF2587	0.13	+0.1
2,602,042	-		GFF2587	0.14	-2.1
2,602,066	-		GFF2587	0.17	-2.9
2,602,068	-		GFF2587	0.17	-1.0
2,602,091	+		GFF2587	0.19	-0.9
2,602,103	+		GFF2587	0.21	+1.4
2,602,110	+		GFF2587	0.21	+0.2
2,602,111	-		GFF2587	0.21	-1.5
2,602,115	+		GFF2587	0.22	-0.8
2,602,115	+		GFF2587	0.22	-1.4
2,602,115	+		GFF2587	0.22	-1.3
2,602,115	+		GFF2587	0.22	-0.1
2,602,115	+		GFF2587	0.22	-0.3
2,602,115	+		GFF2587	0.22	+0.0
2,602,117	-		GFF2587	0.22	-2.0
2,602,123	-		GFF2587	0.23	-1.2
2,602,123	-		GFF2587	0.23	-2.2
2,602,189	-		GFF2587	0.30	+1.2
2,602,202	-		GFF2587	0.32	-0.1
2,602,205	+		GFF2587	0.32	-2.4
2,602,205	+		GFF2587	0.32	+0.5
2,602,207	-		GFF2587	0.32	-1.0
2,602,212	-		GFF2587	0.33	-1.3
2,602,213	-		GFF2587	0.33	-1.2
2,602,284	-		GFF2587	0.41	-0.6
2,602,292	+		GFF2587	0.42	-0.2
2,602,297	+		GFF2587	0.42	+0.7
2,602,306	-		GFF2587	0.43	-3.0
2,602,312	-		GFF2587	0.44	+0.3
2,602,313	+		GFF2587	0.44	+0.4
2,602,317	+		GFF2587	0.44	-1.0
2,602,321	-		GFF2587	0.45	-0.2
2,602,331	-		GFF2587	0.46	-0.9
2,602,331	-		GFF2587	0.46	+0.2
2,602,331	-		GFF2587	0.46	+1.0
2,602,331	-		GFF2587	0.46	+0.2
2,602,347	+		GFF2587	0.48	+1.3
2,602,347	+		GFF2587	0.48	-1.0
2,602,347	+		GFF2587	0.48	+0.1
2,602,355	-		GFF2587	0.49	+0.1
2,602,355	-		GFF2587	0.49	-1.2
2,602,355	-		GFF2587	0.49	-0.4
2,602,355	-		GFF2587	0.49	-0.9
2,602,355	-		GFF2587	0.49	-0.3
2,602,355	-		GFF2587	0.49	-1.6
2,602,355	-		GFF2587	0.49	+0.0
2,602,355	-		GFF2587	0.49	+2.0
2,602,355	-		GFF2587	0.49	-0.3
2,602,355	-		GFF2587	0.49	+0.6
2,602,355	-		GFF2587	0.49	+0.6
2,602,355	-		GFF2587	0.49	+0.6
2,602,374	+		GFF2587	0.51	-0.8
2,602,374	+		GFF2587	0.51	+0.5
2,602,374	+		GFF2587	0.51	-2.7
2,602,374	+		GFF2587	0.51	+0.9
2,602,374	-		GFF2587	0.51	+0.5
2,602,382	-		GFF2587	0.51	-1.2
2,602,382	-		GFF2587	0.51	+1.1
2,602,382	-		GFF2587	0.51	-2.1
2,602,382	-		GFF2587	0.51	-1.1
2,602,382	-		GFF2587	0.51	-0.8
2,602,401	-		GFF2587	0.54	-0.4
2,602,401	-		GFF2587	0.54	-1.2
2,602,401	-		GFF2587	0.54	+0.8
2,602,485	-		GFF2587	0.63	-1.4
2,602,488	+		GFF2587	0.63	-0.4
2,602,488	+		GFF2587	0.63	-0.9
2,602,488	+		GFF2587	0.63	+0.2
2,602,488	+		GFF2587	0.63	-1.3
2,602,488	+		GFF2587	0.63	+0.9
2,602,488	+		GFF2587	0.63	-0.5
2,602,488	+		GFF2587	0.63	+0.3
2,602,488	+		GFF2587	0.63	-0.1
2,602,493	+		GFF2587	0.64	-1.5
2,602,496	-		GFF2587	0.64	-1.1
2,602,496	-		GFF2587	0.64	-0.2
2,602,496	-		GFF2587	0.64	+0.6
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