Strain Fitness in Sphingobium sp. HT1-2 around GFF1545

Experiment: EMM_noCarbon with Sucrose and Putrescine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Putrescine
1,576,517	-				-0.4
1,576,530	-				-1.7
1,576,555	-				-1.8
1,576,578	-				-0.3
1,576,579	-				+0.1
1,576,611	-				-0.7
1,576,631	-				-1.8
1,576,631	-				+0.2
1,576,631	-				+0.3
1,576,632	-				-1.3
1,576,910	-				-0.1
1,576,946	-				-0.3
1,576,951	-				+0.0
1,576,954	-				-1.1
1,576,961	+				-0.3
1,576,969	-				+0.3
1,576,969	-				-0.3
1,577,065	-				+0.6
1,577,071	+				+0.4
1,577,078	+				-0.1
1,577,078	+				-1.2
1,577,078	+				+0.3
1,577,078	+				+1.7
1,577,078	+				-1.1
1,577,078	+				-0.4
1,577,083	+				-0.1
1,577,083	+				-1.8
1,577,083	+				-1.1
1,577,083	+				+1.5
1,577,083	+				-1.0
1,577,086	-				+1.0
1,577,086	-				-0.3
1,577,086	-				-0.1
1,577,086	-				-1.5
1,577,091	-				+0.1
1,577,091	-				-1.4
1,577,093	+				+0.3
1,577,101	+				-1.5
1,577,101	+				+0.6
1,577,101	+				-1.4
1,577,101	+				+1.1
1,577,101	+				-2.3
1,577,101	+				-0.3
1,577,101	-				-1.5
1,577,101	-				+0.1
1,577,101	-				-0.3
1,577,101	-				-1.8
1,577,109	-				+0.4
1,577,109	-				-0.4
1,577,109	-				-1.3
1,577,109	-				-0.7
1,577,111	+		GFF1545	0.10	+0.7
1,577,111	+		GFF1545	0.10	+0.1
1,577,119	-		GFF1545	0.11	+0.9
1,577,119	-		GFF1545	0.11	+1.5
1,577,128	+		GFF1545	0.11	-0.2
1,577,136	-		GFF1545	0.12	-0.3
1,577,140	+		GFF1545	0.12	-1.5
1,577,140	+		GFF1545	0.12	-1.1
1,577,140	+		GFF1545	0.12	-0.8
1,577,160	+		GFF1545	0.14	+1.1
1,577,168	+		GFF1545	0.14	+0.0
1,577,168	+		GFF1545	0.14	-0.9
1,577,178	+		GFF1545	0.15	-1.6
1,577,178	+		GFF1545	0.15	-0.9
1,577,186	-		GFF1545	0.16	+1.0
1,577,188	+		GFF1545	0.16	-1.1
1,577,196	-		GFF1545	0.16	-1.4
1,577,220	+		GFF1545	0.18	-0.4
1,577,222	+		GFF1545	0.18	-0.7
1,577,228	-		GFF1545	0.19	+1.1
1,577,231	+		GFF1545	0.19	-0.1
1,577,231	+		GFF1545	0.19	-0.0
1,577,231	+		GFF1545	0.19	+0.1
1,577,239	-		GFF1545	0.20	+1.0
1,577,239	-		GFF1545	0.20	-1.0
1,577,239	-		GFF1545	0.20	-0.8
1,577,261	+		GFF1545	0.21	-0.1
1,577,261	+		GFF1545	0.21	+1.3
1,577,261	+		GFF1545	0.21	-0.4
1,577,261	+		GFF1545	0.21	-0.2
1,577,261	+		GFF1545	0.21	-0.8
1,577,261	+		GFF1545	0.21	+0.5
1,577,261	+		GFF1545	0.21	-1.0
1,577,261	+		GFF1545	0.21	-0.8
1,577,261	+		GFF1545	0.21	-0.0
1,577,266	+		GFF1545	0.22	-0.5
1,577,269	-		GFF1545	0.22	-0.5
1,577,269	-		GFF1545	0.22	-1.6
1,577,269	-		GFF1545	0.22	-1.2
1,577,269	-		GFF1545	0.22	-0.0
1,577,269	-		GFF1545	0.22	+0.8
1,577,269	-		GFF1545	0.22	-1.4
1,577,269	-		GFF1545	0.22	-0.8
1,577,269	-		GFF1545	0.22	-0.3
1,577,269	-		GFF1545	0.22	+0.0
1,577,269	-		GFF1545	0.22	-2.1
1,577,270	-		GFF1545	0.22	-0.6
1,577,282	+		GFF1545	0.23	+0.8
1,577,282	+		GFF1545	0.23	+0.1
1,577,282	+		GFF1545	0.23	+0.5
1,577,282	+		GFF1545	0.23	-1.8
1,577,285	-		GFF1545	0.23	+0.5
1,577,285	-		GFF1545	0.23	-0.3
1,577,290	-		GFF1545	0.24	-1.0
1,577,290	-		GFF1545	0.24	+0.7
1,577,290	-		GFF1545	0.24	+0.8
1,577,290	-		GFF1545	0.24	+1.3
1,577,290	-		GFF1545	0.24	-0.5
1,577,290	-		GFF1545	0.24	+0.4
1,577,295	-		GFF1545	0.24	+0.0
1,577,296	+		GFF1545	0.24	-0.5
1,577,334	+		GFF1545	0.27	-1.6
1,577,339	+		GFF1545	0.27	+1.1
1,577,346	+		GFF1545	0.28	+1.4
1,577,346	+		GFF1545	0.28	+0.1
1,577,346	+		GFF1545	0.28	-0.3
1,577,346	+		GFF1545	0.28	-2.7
1,577,346	-		GFF1545	0.28	-0.8
1,577,351	+		GFF1545	0.28	+1.0
1,577,357	+		GFF1545	0.29	-1.1
1,577,358	+		GFF1545	0.29	-0.5
1,577,358	+		GFF1545	0.29	+0.1
1,577,358	+		GFF1545	0.29	-1.5
1,577,358	+		GFF1545	0.29	-0.3
1,577,358	+		GFF1545	0.29	-0.4
1,577,359	-		GFF1545	0.29	-0.2
1,577,364	-		GFF1545	0.29	+0.9
1,577,366	-		GFF1545	0.29	+0.9
1,577,366	-		GFF1545	0.29	-1.0
1,577,366	-		GFF1545	0.29	-1.1
1,577,368	+		GFF1545	0.30	-0.2
1,577,368	+		GFF1545	0.30	-1.4
1,577,368	+		GFF1545	0.30	-0.9
1,577,376	-		GFF1545	0.30	+0.3
1,577,376	-		GFF1545	0.30	-1.6
1,577,376	-		GFF1545	0.30	-0.3
1,577,376	-		GFF1545	0.30	-1.5
1,577,376	-		GFF1545	0.30	+0.7
1,577,398	+		GFF1545	0.32	-0.3
1,577,413	+		GFF1545	0.33	-1.1
1,577,413	+		GFF1545	0.33	+0.1
1,577,413	+		GFF1545	0.33	+1.6
1,577,413	+		GFF1545	0.33	-0.5
1,577,421	-		GFF1545	0.34	-0.2
1,577,421	-		GFF1545	0.34	+0.4
1,577,421	-		GFF1545	0.34	-0.7
1,577,430	+		GFF1545	0.34	+1.5
1,577,431	+		GFF1545	0.34	-0.4
1,577,456	-		GFF1545	0.36	-0.6
1,577,456	-		GFF1545	0.36	+0.4
1,577,456	-		GFF1545	0.36	-2.5
1,577,456	-		GFF1545	0.36	+0.4
1,577,456	-		GFF1545	0.36	-1.6
1,577,464	+		GFF1545	0.37	-0.6
1,577,464	+		GFF1545	0.37	-1.0
1,577,464	+		GFF1545	0.37	+0.9
1,577,464	+		GFF1545	0.37	-1.1
1,577,472	-		GFF1545	0.38	-1.7
1,577,481	-		GFF1545	0.38	+0.1
1,577,498	-		GFF1545	0.40	-1.1
1,577,503	-		GFF1545	0.40	+0.2
1,577,503	-		GFF1545	0.40	+0.5
1,577,507	+		GFF1545	0.40	+0.7
1,577,507	+		GFF1545	0.40	-0.1
1,577,509	+		GFF1545	0.40	-0.1
1,577,509	+		GFF1545	0.40	-0.2
1,577,514	+		GFF1545	0.41	-1.9
1,577,520	+		GFF1545	0.41	-1.0
1,577,522	-		GFF1545	0.41	+1.4
1,577,526	-		GFF1545	0.42	+0.1
1,577,538	-		GFF1545	0.43	+0.4
1,577,550	+		GFF1545	0.43	+1.5
1,577,558	-		GFF1545	0.44	-0.8
1,577,558	-		GFF1545	0.44	+0.1
1,577,560	+		GFF1545	0.44	+0.8
1,577,560	-		GFF1545	0.44	-0.1
1,577,566	+		GFF1545	0.45	-1.0
1,577,570	+		GFF1545	0.45	+0.5
1,577,570	+		GFF1545	0.45	+0.2
1,577,575	+		GFF1545	0.45	-0.6
1,577,578	-		GFF1545	0.46	-1.6
1,577,580	+		GFF1545	0.46	+0.4
1,577,581	+		GFF1545	0.46	-0.3
1,577,603	+		GFF1545	0.48	-0.9
1,577,603	+		GFF1545	0.48	+0.9
1,577,604	-		GFF1545	0.48	+0.2
1,577,611	-		GFF1545	0.48	+1.1
1,577,611	-		GFF1545	0.48	+0.2
1,577,636	+		GFF1545	0.50	-0.8
1,577,636	+		GFF1545	0.50	+1.3
1,577,636	+		GFF1545	0.50	+1.3
1,577,658	+		GFF1545	0.52	-1.1
1,577,658	+		GFF1545	0.52	+0.7
1,577,658	+		GFF1545	0.52	-0.9
1,577,658	+		GFF1545	0.52	+0.1
1,577,660	+		GFF1545	0.52	-0.5
1,577,665	+		GFF1545	0.52	-1.3
1,577,665	+		GFF1545	0.52	+0.1
1,577,665	+		GFF1545	0.52	-0.5
1,577,666	-		GFF1545	0.52	-1.2
1,577,666	-		GFF1545	0.52	+1.0
1,577,666	-		GFF1545	0.52	-0.7
1,577,666	-		GFF1545	0.52	-1.0
1,577,666	-		GFF1545	0.52	+0.1
1,577,668	-		GFF1545	0.52	-0.6
1,577,670	+		GFF1545	0.53	-0.4
1,577,673	-		GFF1545	0.53	-1.3
1,577,678	-		GFF1545	0.53	-0.3
1,577,694	+		GFF1545	0.54	+0.1
1,577,705	+		GFF1545	0.55	+0.4
1,577,715	+		GFF1545	0.56	-0.2
1,577,715	+		GFF1545	0.56	-2.2
1,577,715	+		GFF1545	0.56	-1.7
1,577,720	+		GFF1545	0.56	+1.7
1,577,720	+		GFF1545	0.56	+0.2
1,577,723	-		GFF1545	0.57	+0.3
1,577,723	-		GFF1545	0.57	-1.1
1,577,723	-		GFF1545	0.57	-2.8
1,577,730	+		GFF1545	0.57	+0.9
1,577,730	+		GFF1545	0.57	-0.7
1,577,731	+		GFF1545	0.57	+0.3
1,577,731	+		GFF1545	0.57	-1.0
1,577,738	-		GFF1545	0.58	-1.6
1,577,753	+		GFF1545	0.59	-0.4
1,577,753	+		GFF1545	0.59	-1.1
1,577,769	+		GFF1545	0.60	+0.6
1,577,783	+		GFF1545	0.61	-1.7
1,577,797	+		GFF1545	0.62	+0.7
1,577,803	-		GFF1545	0.63	+0.1
1,577,874	-		GFF1545	0.68	+0.5
1,577,874	-		GFF1545	0.68	-0.9
1,577,879	+		GFF1545	0.69	+0.2
1,577,899	+		GFF1545	0.70	+0.7
1,577,899	+		GFF1545	0.70	-0.3
1,577,899	+		GFF1545	0.70	-2.2
1,577,904	+		GFF1545	0.70	-0.5
1,577,907	+		GFF1545	0.71	-0.7
1,577,907	+		GFF1545	0.71	-1.6
1,577,907	+		GFF1545	0.71	+0.4
1,577,915	-		GFF1545	0.71	-1.4
1,577,915	-		GFF1545	0.71	-1.3
1,577,915	-		GFF1545	0.71	-0.2
1,577,915	-		GFF1545	0.71	+0.0
1,577,918	+		GFF1545	0.72	-1.1
1,577,918	+		GFF1545	0.72	-1.1
1,577,920	-		GFF1545	0.72	-1.4
1,577,923	+		GFF1545	0.72	+0.1
1,577,986	+		GFF1545	0.77	+0.7
1,577,986	+		GFF1545	0.77	-0.6
1,577,986	+		GFF1545	0.77	-1.0
1,577,993	+		GFF1545	0.77	-0.2
1,577,994	-		GFF1545	0.77	+0.3
1,577,998	+		GFF1545	0.78	-2.4
1,577,998	+		GFF1545	0.78	-0.1
1,577,998	+		GFF1545	0.78	-0.7
1,578,001	-		GFF1545	0.78	+1.0
1,578,001	-		GFF1545	0.78	+0.9
1,578,003	+		GFF1545	0.78	-0.3
1,578,003	+		GFF1545	0.78	-2.4
1,578,003	+		GFF1545	0.78	+0.3
1,578,003	+		GFF1545	0.78	+0.3
1,578,006	-		GFF1545	0.78	+0.1
1,578,006	-		GFF1545	0.78	-2.3
1,578,006	-		GFF1545	0.78	+1.2
1,578,008	+		GFF1545	0.78	+0.1
1,578,008	+		GFF1545	0.78	+0.2
1,578,008	+		GFF1545	0.78	-0.0
1,578,008	+		GFF1545	0.78	-1.6
1,578,008	+		GFF1545	0.78	+0.7
1,578,008	+		GFF1545	0.78	+0.1
1,578,008	+		GFF1545	0.78	-0.0
1,578,008	+		GFF1545	0.78	+0.1
1,578,008	+		GFF1545	0.78	-2.8
1,578,008	+		GFF1545	0.78	+0.5
1,578,008	+		GFF1545	0.78	+0.4
1,578,008	+		GFF1545	0.78	-0.1
1,578,008	+		GFF1545	0.78	+0.5
1,578,008	+		GFF1545	0.78	-1.1
1,578,008	+		GFF1545	0.78	-1.7
1,578,011	-		GFF1545	0.79	+0.1
1,578,011	-		GFF1545	0.79	+0.7
1,578,011	-		GFF1545	0.79	-0.2
1,578,011	-		GFF1545	0.79	+0.4
1,578,016	-		GFF1545	0.79	+1.0
1,578,016	-		GFF1545	0.79	-0.3
1,578,016	-		GFF1545	0.79	+0.2
1,578,016	-		GFF1545	0.79	+0.6
1,578,016	-		GFF1545	0.79	-0.4
1,578,016	-		GFF1545	0.79	+0.6
1,578,016	-		GFF1545	0.79	+0.3
1,578,016	-		GFF1545	0.79	-0.8
1,578,016	-		GFF1545	0.79	+1.1
1,578,016	-		GFF1545	0.79	+0.6
1,578,016	-		GFF1545	0.79	-1.4
1,578,016	-		GFF1545	0.79	-0.0
1,578,018	+		GFF1545	0.79	-0.2
1,578,019	+		GFF1545	0.79	-0.3
1,578,024	-		GFF1545	0.80	-0.3
1,578,053	-		GFF1545	0.82	-0.3
1,578,065	-		GFF1545	0.83	+0.3
1,578,092	+		GFF1545	0.85	+1.6
1,578,096	+		GFF1545	0.85	+1.2
1,578,108	+		GFF1545	0.86	-0.3
1,578,111	-		GFF1545	0.86	-1.1
1,578,116	-		GFF1545	0.87	-0.1
1,578,118	+		GFF1545	0.87	+1.7
1,578,127	+		GFF1545	0.87	+0.5
1,578,131	-		GFF1545	0.88	+0.4
1,578,136	-		GFF1545	0.88	+0.4
1,578,165	+				+1.2
1,578,165	+				+0.9
1,578,173	-				-0.4
1,578,207	+				+0.1
1,578,215	-				+0.5
1,578,215	-				-3.1
1,578,240	-				+0.7
1,578,240	-				+0.3
1,578,247	-				-0.5
1,578,254	+				+1.4
1,578,254	+				+0.6
1,578,254	+				+0.8
1,578,254	+				-0.4
1,578,254	+				+0.7
1,578,254	+				+0.8
1,578,254	+				-0.4
1,578,254	+				-1.9
1,578,256	+				-0.4
1,578,256	+				+0.5
1,578,262	-				+0.3
1,578,262	-				-0.6
1,578,262	-				-0.4
1,578,264	-				+0.5
1,578,264	-				-0.7
1,578,264	-				+1.0
1,578,264	-				-0.4
1,578,264	-				-0.5
1,578,264	-				-2.1
1,578,264	-				-1.3
1,578,264	-				-0.7
1,578,264	-				-0.6
1,578,283	+				-0.2
1,578,283	-				+0.2
1,578,287	-				-0.3
1,578,301	+				-0.7
1,579,052	+				-1.7
1,579,052	+				+0.6
1,579,052	+				-1.1
1,579,052	+				-1.6
1,579,052	+				-0.2
1,579,052	+				-0.3
1,579,052	+				-0.2
1,579,052	+				-0.6
1,579,052	+				-1.5
1,579,052	+				-1.3
1,579,052	+				-1.5
1,579,060	-				+0.9
1,579,060	-				-0.3
1,579,060	-				-0.3
1,579,060	-				-1.3
1,579,060	-				-0.0
1,579,060	-				+0.0
1,579,060	-				-0.7
1,579,060	-				-1.3
1,579,060	-				+0.2
1,579,060	-				+0.9
1,579,060	-				-1.6
1,579,060	-				-1.6
1,579,060	-				+0.5
1,579,060	-				-1.1
1,579,060	-				-0.5
1,579,060	-				+0.3
1,579,060	-				+0.3
1,579,060	-				+0.9
1,579,060	-				+0.2
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